Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMYD1

Gene Name Gene ID Reads Annotation
SMYD1 ENSGALG00000015935 75 SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]











Genes with expression patterns similar to SMYD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMYD1 ENSGALG00000015935 75 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
2. RNASET2 ENSGALG00000011426 40 1.626 - - 0.740 - - - - 0.886 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
3. NXPH2 ENSGALG00000029083 353 0.952 - - - - - - - 0.952 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
4. PLB1 PLB1 101 0.949 - - - - - - - 0.949 - -
5. CNTN1 ENSGALG00000009523 158 0.949 - - - - - - - 0.949 - - contactin 1 [Source:NCBI gene;Acc:417786]
6. USP53 ENSGALG00000011990 12 0.949 - - - - - - - 0.949 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
7. FOXP4 ENSGALG00000033497 13 0.949 - - - - - - - 0.949 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
8. ENSGALG00000019053 ENSGALG00000019053 8 0.949 - - - - - - - 0.949 - -
9. STAB1 21 0.949 - - - - - - - 0.949 - - stabilin 1, transcript variant X2
10. SDR42E2 ENSGALG00000006964 57 0.949 - - - - - - - 0.949 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
11. CCDC96 9 0.949 - - - - - - - 0.949 - - coiled-coil domain containing 96
12. GINS3 ENSGALG00000031209 32 0.949 - - - - - - - 0.949 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
13. APOAIV APOAIV 5 0.949 - - - - - - - 0.949 - -
14. GFAP ENSGALG00000000909 21 0.947 - - - - - - - 0.947 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
15. TMCO4 ENSGALG00000004081 31 0.946 - - - - - - - 0.946 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
16. KRT20 ENSGALG00000019716 11 0.945 - - - - - - - 0.945 - - keratin 20 [Source:NCBI gene;Acc:420045]
17. ICOS ENSGALG00000008656 27 0.945 - - - - - - - 0.945 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
18. ANKRD44 ENSGALG00000007996 17 0.945 - - - - - - - 0.945 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
19. DNAI2 ENSGALG00000004495 45 0.944 - - - - - - - 0.944 - - dynein axonemal intermediate chain 2
20. CD4 ENSGALG00000014477 19 0.944 - - - - - - - 0.944 - - CD4 molecule [Source:NCBI gene;Acc:395362]
21. INA ENSGALG00000028238 208 0.941 - - - - - - - 0.941 - - internexin neuronal intermediate filament protein alpha
22. MAPT ENSGALG00000000625 659 0.94 - - - - - - - 0.940 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
23. HAVCR1 ENSGALG00000017362 25 0.94 - - - - - - - 0.940 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
24. ABCA8 ENSGALG00000021399 11 0.938 - - - - - - - 0.938 - - ATP binding cassette subfamily A member 8
25. ENSGALG00000019522 ENSGALG00000019522 122 0.935 - - - - - - - 0.935 - -
26. KLRD1 ENSGALG00000014722 27 0.935 - - - - - - - 0.935 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
27. KIAA0513 ENSGALG00000025938 46 0.932 - - - - - - - 0.932 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
28. IRG1 IRG1 21 0.932 - - - - - - - 0.932 - -
29. ZIC3 ENSGALG00000031144 863 0.931 - - - - - - - 0.931 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
30. AQP12 AQP12 11 0.93 - - - - - - - 0.930 - -
31. RIPK4 ENSGALG00000040189 102 0.928 - - - - - - - 0.928 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
32. PTPRD ENSGALG00000015058 37 0.923 - - - - - - - 0.923 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
33. PAK2 ENSGALG00000006426 283 0.922 - - - - - - - 0.922 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
34. DZANK1 ENSGALG00000008731 120 0.917 - - - - - - - 0.917 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
35. LOC417973 ENSGALG00000019325 9 0.916 - - - - - - - 0.916 - - uncharacterized LOC417973, transcript variant X1
36. ENPP3 ENSGALG00000037587 25 0.914 - - - - - - - 0.914 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
37. TRAF-5 TRAF-5 102 0.914 - - - - - - - 0.914 - -
38. EPB41L4A ENSGALG00000000234 113 0.913 - - - - - - - 0.913 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
39. FAM219A ENSGALG00000005821 52 0.907 - - - - - - - 0.907 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
40. C1QTNF6 ENSGALG00000027067 493 0.905 - - - - - - - 0.905 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
41. ENSGALG00000023731 ENSGALG00000023731 149 0.9 - - - - - - - 0.900 - -
42. ARHGAP25 ENSGALG00000035194 74 0.899 - - - - - - - 0.899 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
43. LMOD1 ENSGALG00000028721 81 0.895 - - - - - - - 0.895 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
44. ABCC4 ENSGALG00000016896 154 0.891 - - - - - - - 0.891 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
45. ENSGALG00000021882 ENSGALG00000021882 63 0.889 - - - - - - - 0.889 - -
46. GPR61 ENSGALG00000040168 70 0.888 - - - - - - - 0.888 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
47. KDM5A ENSGALG00000012986 624 0.886 - - - - - - - 0.886 - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
48. PRSS35 ENSGALG00000015847 52 0.881 - - - - - - - 0.881 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
49. NRIP3 ENSGALG00000005903 58 0.88 - - - - - - - 0.880 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
50. DSC1 ENSGALG00000015140 16 0.879 - - - - - - - 0.879 - - desmocollin 1, transcript variant X1
51. CD200R1A CD200R1A 105 0.875 - - - - - - - 0.875 - -
52. STXBP1 ENSGALG00000040003 157 0.874 - - - - - - - 0.874 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
53. MMEL1 ENSGALG00000001115 46 0.873 - - - - - - - 0.873 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
54. TRIM55 ENSGALG00000041327 1097 0.872 - - - - - - - 0.872 - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
55. ENSGALG00000019430 ENSGALG00000019430 32 0.871 - - - - - - - 0.871 - -
56. ADCYAP1R1 ENSGALG00000005223 114 0.87 - - - - - - - 0.870 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
57. ZNFX1 ENSGALG00000004859 33 0.866 - - - - - - - 0.866 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
58. CCDC86 ENSGALG00000036935 5280 0.864 - - - - - - - 0.864 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
59. PPM1F ENSGALG00000039121 26 0.864 - - - - - - - 0.864 - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
60. ARHGEF37 ENSGALG00000039652 28 0.86 - - - - - - - 0.860 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
61. SPINK4 ENSGALG00000043964 50 0.859 - - - - - - - 0.859 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
62. TP53I3 ENSGALG00000016502 178 0.858 - - - - - - - 0.858 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
63. FAM65C 36 0.858 - - - - - - - 0.858 - - family with sequence similarity 65 member C, transcript variant X29
64. DCLK1 ENSGALG00000041263 40 0.852 - - - - - - - 0.852 - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
65. FAM19A3 75 0.847 - - - - - - - 0.847 - - family with sequence similarity 19 member A3, C-C motif chemokine like, transcript variant X2
66. LCA5L ENSGALG00000016125 99 0.846 - - - - - - - 0.846 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
67. PIP5K1A ENSGALG00000027372 137 0.844 - - - - - - - 0.844 - - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha [Source:NCBI gene;Acc:429983]
68. INPP4A ENSGALG00000029709 48 0.841 - - - - - - - 0.841 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
69. LMO2 ENSGALG00000029892 4773 0.84 - - - - - - - 0.840 - - LIM domain only 2 [Source:NCBI gene;Acc:374129]
70. SNAP23 ENSGALG00000009097 36 0.84 - - - - - - - 0.840 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
71. SLC7A2 ENSGALG00000013627 58 0.838 - - - - - - - 0.838 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
72. STAG3 STAG3 34 0.837 - - 0.837 - - - - - - -
73. HDAC11 ENSGALG00000005092 176 0.835 - - - - - - - 0.835 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
74. SUZ12 ENSGALG00000003277 177 0.832 - - - - - - - 0.832 - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
75. ABCB7 ENSGALG00000007788 170 0.828 - - - - - - - 0.828 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
76. SLC35F4 ENSGALG00000012094 30 0.828 - - - - - - 0.828 - - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
77. HERPUD1 ENSGALG00000001220 18 0.827 - - 0.827 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
78. GFRA1 ENSGALG00000009173 371 0.827 - - - - - - - 0.827 - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
79. RTN4RL2 ENSGALG00000032903 809 0.825 - - - - - - - 0.825 - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
80. GPR37L1 ENSGALG00000000607 166 0.824 - - - - - - 0.824 - - - G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]
81. RGMB ENSGALG00000015284 14 0.82 - - 0.820 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
82. ARRDC1 ENSGALG00000008475 80 0.819 - - - - - - - 0.819 - - arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
83. LPXN 133 0.819 - - - - - - - 0.819 - - leupaxin, transcript variant X4
84. CDKN3 ENSGALG00000012220 41 0.815 - - - - - - - 0.815 - - cyclin dependent kinase inhibitor 3 [Source:NCBI gene;Acc:423562]
85. LASP-2 LASP-2 4415 0.814 - - - - - - - 0.814 - -
86. ST6GALNAC1 ENSGALG00000001862 133 0.813 - - - - - - - 0.813 - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396168]
87. GTPBP8 ENSGALG00000015190 21 0.813 - - 0.813 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
88. FAM69A ENSGALG00000005918 157 0.811 - - 0.811 - - - - - - - family with sequence similarity 69 member A, transcript variant X4
89. POPDC2 ENSGALG00000014988 281 0.81 - - - - - - - 0.810 - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
90. ENSGALG00000019568 ENSGALG00000019568 25 0.808 - - 0.808 - - - - - - -
91. ENSGALG00000017269 ENSGALG00000017269 13 0.807 - - 0.807 - - - - - - -
92. ASTL ENSGALG00000037220 2775 0.807 - - 0.807 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
93. TMEM161B ENSGALG00000010896 36 0.805 - - 0.805 - - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
94. ACAP3 ENSGALG00000033293 605 0.804 - - - - - - - 0.804 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
95. FURIN ENSGALG00000008341 2609 0.803 - - - - - - - 0.803 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
96. EPHA10 ENSGALG00000001912 5 0.802 - - 0.802 - - - - - - - EPH receptor A10, transcript variant X1
97. SLC6A18 ENSGALG00000013180 6 0.802 - - 0.802 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
98. ENSGALG00000020389 ENSGALG00000020389 5 0.802 - - 0.802 - - - - - - -
99. C14H16ORF42 C14H16ORF42 263 0.802 - - - - - - - 0.802 - -
100. LEPREL2 LEPREL2 2046 0.801 - - - - - - - 0.801 - -

There are 148 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA