Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMURF1

Gene Name Gene ID Reads Annotation
SMURF1 ENSGALG00000004655 4 SMAD specific E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:16807]











Genes with expression patterns similar to SMURF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMURF1 ENSGALG00000004655 4 3 - - 1.000 1.000 - 1.000 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:16807]
2. RBMS3 ENSGALG00000011439 25 1.804 - - 0.804 1.000 - - - - - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
3. ENSGALG00000027026 ENSGALG00000027026 3 1 - - - 1.000 - - - - - -
4. ZIC4 ENSGALG00000006810 2 1 - - - 1.000 - - - - - - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
5. ENSGALG00000023694 ENSGALG00000023694 45 1 - - - 1.000 - - - - - -
6. FBXL22 ENSGALG00000003401 1 1 - - - 1.000 - - - - - - F-box and leucine rich repeat protein 22 [Source:HGNC Symbol;Acc:HGNC:27537]
7. VANGL2 ENSGALG00000030643 3 1 - - - 1.000 - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
8. MYLK2 ENSGALG00000006273 5 1 - - - 1.000 - - - - - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
9. OCSTAMP ENSGALG00000044719 10 1 - - - 1.000 - - - - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
10. GRIN1 ENSGALG00000008898 18 1 - - - 1.000 - - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
11. DCUN1D3 ENSGALG00000002267 6 1 - - - 1.000 - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
12. RD RD 99 1 - - - 1.000 - - - - - -
13. CSF2RA ENSGALG00000016693 5 1 - - - 1.000 - - - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
14. RNF182 ENSGALG00000012700 4 1 - - - 1.000 - - - - - - ring finger protein 182 [Source:HGNC Symbol;Acc:HGNC:28522]
15. CACNB2 ENSGALG00000008591 53 1 - - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
16. ABCA1 ENSGALG00000015433 11 1 - - - 1.000 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
17. GTPBP6 ENSGALG00000016717 17 1 - - - 1.000 - - - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
18. AJAP1 ENSGALG00000027265 11 1 - - - 1.000 - - - - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
19. CCDC152 CCDC152 28 1 - - - 1.000 - - - - - -
20. SLC14A2 SLC14A2 4 1 - - - 1.000 - - - - - -
21. C2orf50 ENSGALG00000046449 17 1 - - - 1.000 - - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
22. NT5E ENSGALG00000015833 5 1 - - - 1.000 - - - - - - 5'-nucleotidase ecto
23. MAPKBP1 2 0.952 - - 0.952 - - - - - - - mitogen-activated protein kinase binding protein 1, transcript variant X3
24. ENSGALG00000004351 ENSGALG00000004351 2 0.952 - - 0.952 - - - - - - -
25. TRHDE ENSGALG00000010200 4 0.952 - - 0.952 - - - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
26. NKAIN1 ENSGALG00000000604 4 0.952 - - 0.952 - - - - - - - sodium/potassium transporting ATPase interacting 1, transcript variant X2
27. FBXO15 ENSGALG00000013720 4 0.952 - - 0.952 - - - - - - - F-box protein 15 [Source:HGNC Symbol;Acc:HGNC:13617]
28. AQP9 ENSGALG00000004261 4 0.952 - - 0.952 - - - - - - - aquaporin 9 [Source:NCBI gene;Acc:415402]
29. MSLN ENSGALG00000005349 1 0.952 - - 0.952 - - - - - - - mesothelin, transcript variant X5
30. GAL4 GAL4 2 0.952 - - 0.952 - - - - - - -
31. EFCAB4A EFCAB4A 12 0.952 - - 0.952 - - - - - - -
32. ENSGALG00000009685 ENSGALG00000009685 1 0.952 - - 0.952 - - - - - - -
33. CMBL ENSGALG00000013033 3 0.952 - - 0.952 - - - - - - - carboxymethylenebutenolidase homolog, transcript variant X4
34. DPYS ENSGALG00000039011 54 0.952 - - 0.952 - - - - - - - dihydropyrimidinase [Source:NCBI gene;Acc:420266]
35. SMYD3 ENSGALG00000010653 14 0.927 - - 0.927 - - - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
36. SEZ6L ENSGALG00000032415 56 0.923 - - - 0.923 - - - - - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
37. RASD1 ENSGALG00000004860 133 0.923 - - - 0.923 - - - - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
38. KCNS2 ENSGALG00000043764 9 0.914 - - - 0.914 - - - - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
39. ENSGALG00000000346 ENSGALG00000000346 130 0.905 - - 0.905 - - - - - - -
40. PALM ENSGALG00000026055 8 0.904 - - - 0.904 - - - - - - paralemmin [Source:NCBI gene;Acc:101750199]
41. CPGC CPGC 33 0.903 - - - - - 0.903 - - - -
42. HOPX ENSGALG00000011404 10 0.897 - - - 0.897 - - - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
43. TMEM51 ENSGALG00000035819 83 0.879 - - 0.879 - - - - - - - transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
44. PGM2L1 ENSGALG00000017304 14 0.865 - - 0.865 - - - - - - - phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
45. CCP110 ENSGALG00000006925 59 0.862 - - 0.862 - - - - - - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
46. DEPTOR ENSGALG00000005790 6 0.861 - - - - - 0.861 - - - - DEP domain containing MTOR-interacting protein
47. CLEC19A ENSGALG00000030546 8 0.861 - - - - - 0.861 - - - - C-type lectin domain containing 19A [Source:HGNC Symbol;Acc:HGNC:34522]
48. PPP1R26 ENSGALG00000002489 45 0.861 - - - - - 0.861 - - - - protein phosphatase 1 regulatory subunit 26 [Source:HGNC Symbol;Acc:HGNC:29089]
49. TRPV2 ENSGALG00000004519 7 0.86 - - - 0.860 - - - - - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
50. RQCD1 RQCD1 110 0.859 - - - 0.859 - - - - - -
51. UGT8L ENSGALG00000005599 93 0.859 - - 0.859 - - - - - - - UDP glycosyltransferase 8-like
52. ABI2 ENSGALG00000008714 27 0.847 - - 0.847 - - - - - - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
53. PAH ENSGALG00000012754 15 0.847 - - 0.847 - - - - - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
54. TTBK1 ENSGALG00000008627 8 0.846 - - 0.846 - - - - - - - tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]
55. GLRA2 ENSGALG00000016571 10 0.844 - - - 0.844 - - - - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
56. PTPRC ENSGALG00000002192 10 0.835 - - 0.835 - - - - - - - protein tyrosine phosphatase, receptor type C [Source:NCBI gene;Acc:386580]
57. RAX1 RAX1 44 0.831 - - - - - 0.831 - - - -
58. SMTNL1 12 0.831 - - 0.831 - - - - - - - smoothelin like 1
59. SNORA56 SNORA56 7 0.829 - - 0.829 - - - - - - -
60. CAPN8 ENSGALG00000009382 8 0.825 - - 0.825 - - - - - - - calpain 8 [Source:HGNC Symbol;Acc:HGNC:1485]
61. SEMA4G ENSGALG00000026957 11 0.822 - - 0.822 - - - - - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
62. ITGBL1 ENSGALG00000016867 36 0.82 - - - 0.820 - - - - - - integrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164]
63. ARHGAP39 ENSGALG00000001536 15 0.817 - - 0.817 - - - - - - - Rho GTPase activating protein 39, transcript variant X2
64. CWH43 ENSGALG00000041921 68 0.815 - - 0.815 - - - - - - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
65. CDC20B ENSGALG00000046188 10 0.809 - - 0.809 - - - - - - - cell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]
66. CDH10 ENSGALG00000032022 37 0.806 - - 0.806 - - - - - - - cadherin 10 [Source:NCBI gene;Acc:408049]
67. AAK1 ENSGALG00000041911 16 0.803 - - - - - 0.803 - - - - AP2 associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:19679]
68. ALDH9A1 ENSGALG00000003495 20 0.803 - - - - - 0.803 - - - - aldehyde dehydrogenase 9 family member A1
69. SWAP70 ENSGALG00000005750 32 0.803 - - - - - 0.803 - - - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
70. LTK ENSGALG00000008615 33 0.803 - - - - - 0.803 - - - - leukocyte receptor tyrosine kinase
71. DISP3 ENSGALG00000004662 146 0.801 - - 0.801 - - - - - - - dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
72. TAS1R1 ENSGALG00000046030 8 0.798 - - 0.798 - - - - - - - taste 1 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14448]
73. PCDH15 ENSGALG00000002744 34 0.798 - - - - - 0.798 - - - - protocadherin related 15 [Source:NCBI gene;Acc:423644]
74. CCNT2 ENSGALG00000012207 14 0.779 - - - - - 0.779 - - - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
75. GPM6B ENSGALG00000016575 18 0.778 - - 0.778 - - - - - - - glycoprotein M6B [Source:NCBI gene;Acc:418632]
76. GRM8 ENSGALG00000039403 17 0.776 - - - 0.776 - - - - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
77. ANKRD44 ENSGALG00000007996 17 0.772 - - 0.772 - - - - - - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
78. CCR5 ENSGALG00000037077 23 0.769 - - 0.769 - - - - - - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
79. SLC30A2 ENSGALG00000010375 44 0.764 - - - 0.764 - - - - - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
80. FAM122B ENSGALG00000006108 16 0.76 - - 0.760 - - - - - - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
81. ENSGALG00000026135 ENSGALG00000026135 16 0.76 - - - 0.760 - - - - - -
82. SORL1 ENSGALG00000006598 39 0.757 - - 0.757 - - - - - - - sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
83. RPS6KA3 ENSGALG00000016406 24 0.755 - - - 0.755 - - - - - - ribosomal protein S6 kinase A3 [Source:HGNC Symbol;Acc:HGNC:10432]
84. TECPR1 ENSGALG00000003507 20 0.754 - - - - - 0.754 - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
85. TLR1LB TLR1LB 65 0.754 - - 0.754 - - - - - - -
86. KLHL30 ENSGALG00000006260 32 0.753 - - - 0.753 - - - - - - kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
87. S100A9 ENSGALG00000024272 103 0.753 - - - 0.753 - - - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
88. ATF6 ENSGALG00000032278 71 0.749 - - - - - 0.749 - - - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
89. PI4KB ENSGALG00000024034 31 0.734 - - 0.734 - - - - - - - phosphatidylinositol 4-kinase beta [Source:HGNC Symbol;Acc:HGNC:8984]
90. FGF1 ENSGALG00000031255 26 0.734 - - 0.734 - - - - - - - fibroblast growth factor 1 [Source:NCBI gene;Acc:396094]
91. CGRRF1 ENSGALG00000012206 41 0.73 - - 0.730 - - - - - - - cell growth regulator with ring finger domain 1 [Source:HGNC Symbol;Acc:HGNC:15528]
92. TLR5 ENSGALG00000009392 28 0.729 - - - 0.729 - - - - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
93. SNORA28 SNORA28 12 0.727 - - - 0.727 - - - - - -
94. RET ENSGALG00000002555 544 0.722 - - 0.722 - - - - - - - ret proto-oncogene [Source:NCBI gene;Acc:396107]
95. SLC40A1 ENSGALG00000043618 16 0.72 - - 0.720 - - - - - - - solute carrier family 40 member 1 [Source:NCBI gene;Acc:423984]
96. HIAT1 HIAT1 447 0.71 - - 0.710 - - - - - - -
97. SEMA3G ENSGALG00000004476 355 0.708 - - - - - 0.708 - - - - semaphorin 3G [Source:HGNC Symbol;Acc:HGNC:30400]
98. TP73 ENSGALG00000001006 335 0.708 - - - - - 0.708 - - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
99. DNAAF1 ENSGALG00000003258 115 0.707 - - - - - 0.707 - - - - dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
100. FEM1C ENSGALG00000008204 9 0.705 - - - 0.705 - - - - - - fem-1 homolog C [Source:HGNC Symbol;Acc:HGNC:16933]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA