Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMTN

Gene Name Gene ID Reads Annotation
SMTN 18 smoothelin, transcript variant X2











Genes with expression patterns similar to SMTN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMTN 18 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 smoothelin, transcript variant X2
2. WDR78 ENSGALG00000045792 6 2 - - - 1.000 - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
3. LRP3 ENSGALG00000004853 13 2 - - - - 1.000 - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
4. MMP11 ENSGALG00000005968 3 2 - - - - 1.000 - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
5. PPP1R36 ENSGALG00000040026 24 1.882 - - - - - 0.882 - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
6. AOC1 13 1.846 - - - - - 0.846 - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
7. DSCAM ENSGALG00000016138 16 1.81 - - - - - - 0.810 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
8. BTBD10 ENSGALG00000005369 56 1.81 - - - - - - 0.810 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
9. COG3 ENSGALG00000016980 15 1.805 - - - 0.805 - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
10. COL4A3 ENSGALG00000038612 41 1.742 - - - - - - - 1.000 - 0.742 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
11. OTX2 ENSGALG00000034889 8 1.728 - - - - - - 0.728 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
12. PLEKHH1 ENSGALG00000009507 18 1.656 - - - - - 0.846 0.810 - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
13. BAFF BAFF 40 1 - - - - - - - 1.000 - -
14. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
15. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
16. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
17. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
18. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
19. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
20. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
21. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
22. C6orf132 ENSGALG00000028570 1 1 - - - - 1.000 - - - - - chromosome 6 open reading frame 132 [Source:HGNC Symbol;Acc:HGNC:21288]
23. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
24. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
25. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
26. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
27. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
28. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
29. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
30. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
31. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
32. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
33. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
34. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
35. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
36. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
37. U2_1 U2_1 13 1 - - - 1.000 - - - - - -
38. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
39. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
40. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
41. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
42. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
43. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
44. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
45. ENSGALG00000002367 ENSGALG00000002367 10 1 - - - - 1.000 - - - - -
46. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
47. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
48. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
49. OLFML1 ENSGALG00000027184 19 1 - - - 1.000 - - - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
50. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
51. NCK2 ENSGALG00000016799 152 1 - - - - 1.000 - - - - - NCK adaptor protein 2 [Source:NCBI gene;Acc:418727]
52. HELIOS HELIOS 2 1 - - - - 1.000 - - - - -
53. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
54. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
55. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
56. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
57. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
58. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
59. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
60. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
61. SGSM1 ENSGALG00000005379 10 1 - - - - 1.000 - - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
62. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
63. KCNS2 ENSGALG00000043764 9 1 - - - - 1.000 - - - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
64. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
65. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
66. LICOS LICOS 13 1 - - - - - - - 1.000 - -
67. ENSGALG00000027201 ENSGALG00000027201 12 1 - - - - 1.000 - - - - -
68. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
69. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
70. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
71. DNAJC28 ENSGALG00000037414 6 1 - - - 1.000 - - - - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
72. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
73. NUDT2 ENSGALG00000027295 15 1 - - - - 1.000 - - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
74. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
75. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
76. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
77. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
78. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
79. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
80. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
81. RQCD1 RQCD1 110 1 - - - - 1.000 - - - - -
82. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
83. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
84. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
85. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
86. SLC30A8 ENSGALG00000034377 3 1 - - - - 1.000 - - - - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
87. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
88. FAM83C ENSGALG00000031906 1 1 - - - - 1.000 - - - - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
89. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
90. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
91. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
92. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
93. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
94. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
95. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
96. MUT ENSGALG00000016697 43 1 - - - - - - - 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
97. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
98. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
99. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
100. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]

There are 294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA