Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMTN

Gene Name Gene ID Reads Annotation
SMTN 18 smoothelin, transcript variant X2











Genes with expression patterns similar to SMTN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMTN 18 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 smoothelin, transcript variant X2
2. LRP3 ENSGALG00000004853 13 2 - - - - 1.000 - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
3. WDR78 ENSGALG00000045792 6 2 - - - 1.000 - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
4. MMP11 ENSGALG00000005968 3 2 - - - - 1.000 - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
5. PPP1R36 ENSGALG00000040026 24 1.882 - - - - - 0.882 - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
6. AOC1 13 1.846 - - - - - 0.846 - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
7. DSCAM ENSGALG00000016138 16 1.81 - - - - - - 0.810 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
8. BTBD10 ENSGALG00000005369 56 1.81 - - - - - - 0.810 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
9. COG3 ENSGALG00000016980 15 1.805 - - - 0.805 - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
10. COL4A3 ENSGALG00000038612 41 1.742 - - - - - - - 1.000 - 0.742 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
11. OTX2 ENSGALG00000034889 8 1.728 - - - - - - 0.728 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
12. PLEKHH1 ENSGALG00000009507 18 1.656 - - - - - 0.846 0.810 - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
13. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
14. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
15. RAD54L ENSGALG00000010356 7 1 - - - - - - - 1.000 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
16. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
17. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
18. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
19. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
20. LINS LINS 18 1 - - - - 1.000 - - - - -
21. FAM124A ENSGALG00000017016 0 1 - - - - - - - 1.000 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
22. SOD3 ENSGALG00000018557 16 1 - - - - 1.000 - - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
23. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
24. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
25. CRBN ENSGALG00000008274 27 1 - - - - 1.000 - - - - - cereblon [Source:HGNC Symbol;Acc:HGNC:30185]
26. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
27. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
28. IL4 ENSGALG00000006827 2 1 - - - - 1.000 - - - - - interleukin 4 [Source:NCBI gene;Acc:416330]
29. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
30. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
31. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
32. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
33. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
34. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
35. FLT4 ENSGALG00000005802 5 1 - - - - - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
36. PYROXD2 ENSGALG00000007014 14 1 - - - - - - - 1.000 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
37. IL18R1 ENSGALG00000040621 12 1 - - - - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
38. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
39. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
40. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
41. OLFML1 ENSGALG00000027184 19 1 - - - 1.000 - - - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
42. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
43. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - - - 1.000 - -
44. FOXG1 ENSGALG00000036364 29 1 - - - - - - - 1.000 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
45. FADS6 ENSGALG00000029445 12 1 - - - - - - - 1.000 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
46. FAM83C ENSGALG00000031906 1 1 - - - - 1.000 - - - - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
47. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
48. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
49. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
50. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
51. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
52. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
53. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
54. NCK2 ENSGALG00000016799 152 1 - - - - 1.000 - - - - - NCK adaptor protein 2 [Source:NCBI gene;Acc:418727]
55. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
56. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
57. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
58. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
59. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
60. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
61. IL8 ENSGALG00000026098 16 1 - - - - - - - 1.000 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
62. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
63. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
64. AK5 ENSGALG00000031652 12 1 - - - - 1.000 - - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
65. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
66. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
67. ANKRD31 46 1 - - - - - - - 1.000 - - ankyrin repeat domain 31, transcript variant X2
68. ABCG1 ENSGALG00000016164 10 1 - - - - - - - 1.000 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
69. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
70. TRAF6 ENSGALG00000007932 12 1 - - - - - - - 1.000 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
71. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
72. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
73. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
74. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
75. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
76. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
77. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
78. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
79. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
80. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
81. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
82. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
83. SLC6A9 ENSGALG00000010098 5 1 - - - - 1.000 - - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
84. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
85. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
86. NUDT2 ENSGALG00000027295 15 1 - - - - 1.000 - - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
87. PICALM ENSGALG00000039037 57 1 - - - - - - - 1.000 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
88. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
89. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
90. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
91. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
92. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
93. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
94. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
95. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
96. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
97. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
98. STMN2 ENSGALG00000039690 989 1 - - - - - - - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
99. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
100. SCN4B ENSGALG00000007409 22 1 - - - - - - - 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]

There are 294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA