Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMS

Gene Name Gene ID Reads Annotation
SMS ENSGALG00000016379 11607 spermine synthase [Source:NCBI gene;Acc:418602]











Genes with expression patterns similar to SMS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMS ENSGALG00000016379 11607 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spermine synthase [Source:NCBI gene;Acc:418602]
2. GAL10 GAL10 33355 1.787 - - - - - 0.933 - - - 0.854
3. ASTL ENSGALG00000037220 2775 1.771 - - - - - 0.917 - - - 0.854 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
4. COPB2 ENSGALG00000005357 15208 1.714 - - - - 0.963 - 0.751 - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
5. DRG1 ENSGALG00000006921 10791 1.667 - - - - 0.946 - 0.721 - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
6. TMEM167A ENSGALG00000027332 13862 1.664 - - - - 0.960 - 0.704 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
7. BUB1 ENSGALG00000008233 11536 1.659 - - - - 0.883 - 0.776 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
8. TSPAN8 ENSGALG00000010152 2666 1.643 - - - - - 0.738 - - - 0.905 tetraspanin 8 [Source:NCBI gene;Acc:417854]
9. EMX1 ENSGALG00000030516 408 1.616 - - - - - 0.817 - - - 0.799 empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]
10. KDM5B ENSGALG00000038948 50645 1.59 - - - - 0.838 - 0.752 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
11. TLR4 ENSGALG00000007001 116 1.544 - - - - - 0.783 - - - 0.761 toll like receptor 4 [Source:NCBI gene;Acc:417241]
12. PAX2 ENSGALG00000005689 351 1.437 - - - - - 0.714 - - - 0.723 paired box 2 [Source:NCBI gene;Acc:395574]
13. SOD2 ENSGALG00000011661 13178 0.973 - - - - 0.973 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
14. FAM18B1 ENSGALG00000001335 5177 0.972 - - - - 0.972 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
15. SH3GLB1 ENSGALG00000006284 12764 0.971 - - - - 0.971 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
16. CDR2L ENSGALG00000026295 4142 0.97 - - - - 0.970 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
17. CRIPT ENSGALG00000010014 4311 0.97 - - - - 0.970 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
18. FOCAD ENSGALG00000015071 3677 0.97 - - - - 0.970 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
19. FBXW7 ENSGALG00000010103 5982 0.97 - - - - 0.970 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
20. TIMM21 ENSGALG00000013709 3215 0.969 - - - - 0.969 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
21. NOL12 ENSGALG00000012410 5658 0.969 - - - - 0.969 - - - - - nucleolar protein 12
22. COPG2 ENSGALG00000008144 4542 0.968 - - - - 0.968 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
23. LFNG ENSGALG00000038515 5178 0.968 - - - - 0.968 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
24. RHBDF1 ENSGALG00000007434 2359 0.967 - - - - 0.967 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
25. AEN ENSGALG00000044204 2633 0.967 - - - - 0.967 - - - - - apoptosis enhancing nuclease, transcript variant X1
26. BTBD7 4136 0.967 - - - - 0.967 - - - - - BTB domain containing 7, transcript variant X2
27. RBM15B 5416 0.966 - - - - 0.966 - - - - - RNA binding motif protein 15B
28. GLB1L2 ENSGALG00000001604 4057 0.966 - - - - 0.966 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
29. OCIAD1 ENSGALG00000014081 12065 0.966 - - - - 0.966 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
30. GPALPP1 ENSGALG00000031567 4221 0.965 - - - - 0.965 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
31. ZNF326 ENSGALG00000006113 15141 0.965 - - - - 0.965 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
32. TMEM65 ENSGALG00000037371 776 0.965 - - - - 0.965 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
33. MXD4 ENSGALG00000015688 1472 0.965 - - - - 0.965 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
34. MAP3K13 ENSGALG00000006655 632 0.965 - - - - 0.965 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
35. ADSL ENSGALG00000012034 10280 0.965 - - - - 0.965 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
36. PCIF1 ENSGALG00000023547 867 0.964 - - - - 0.964 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
37. CNOT2 ENSGALG00000010042 7612 0.964 - - - - 0.964 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
38. AIP ENSGALG00000040247 4166 0.964 - - - - 0.964 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
39. PDXP ENSGALG00000023131 2663 0.963 - - - - 0.963 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
40. C9orf89 C9orf89 3056 0.963 - - - - 0.963 - - - - -
41. TDRD3 ENSGALG00000016936 3412 0.963 - - - - 0.963 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
42. ENSGALG00000005720 ENSGALG00000005720 1666 0.963 - - - - 0.963 - - - - -
43. KAT6A ENSGALG00000003641 2631 0.963 - - - - 0.963 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
44. PIK3CD ENSGALG00000002583 1036 0.963 - - - - 0.963 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
45. SUGT1 ENSGALG00000016946 22881 0.963 - - - - 0.963 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
46. DARS ENSGALG00000012355 2887 0.963 - - - - 0.963 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
47. LSMD1 LSMD1 2562 0.963 - - - - 0.963 - - - - -
48. ITPK1 ENSGALG00000034898 4212 0.963 - - - - 0.963 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
49. CSNK1E ENSGALG00000032257 2165 0.962 - - - - 0.962 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
50. SRP68 ENSGALG00000002062 7370 0.962 - - - - 0.962 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
51. NMT1 ENSGALG00000000857 5770 0.962 - - - - 0.962 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
52. KDM1A ENSGALG00000033469 20632 0.962 - - - - 0.962 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
53. TXNDC9 ENSGALG00000032090 6804 0.962 - - - - 0.962 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
54. TSPAN5 ENSGALG00000012227 8703 0.962 - - - - 0.962 - - - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
55. WDR36 ENSGALG00000000247 11277 0.961 - - - - 0.961 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
56. CLSPN ENSGALG00000002346 2590 0.961 - - - - 0.961 - - - - - claspin [Source:NCBI gene;Acc:428223]
57. PAXIP1 ENSGALG00000036064 3120 0.96 - - - - 0.960 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
58. UTP15 ENSGALG00000013510 13122 0.96 - - - - 0.960 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
59. HABP4 ENSGALG00000012628 2894 0.96 - - - - 0.960 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
60. MAP1LC3A ENSGALG00000038721 2230 0.959 - - - - 0.959 - - - - - microtubule associated protein 1 light chain 3 alpha
61. MTG1 ENSGALG00000003549 5032 0.959 - - - - 0.959 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
62. gga-mir-1778 ENSGALG00000025181 8765 0.959 - - - - 0.959 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
63. B4GAL-T7 B4GAL-T7 12356 0.958 - - - - 0.958 - - - - -
64. TRAM1 ENSGALG00000041112 22876 0.957 - - - - 0.957 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
65. MAP2K4 ENSGALG00000032178 5982 0.957 - - - - 0.957 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
66. WSB2 ENSGALG00000008151 13246 0.957 - - - - 0.957 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
67. MRPL32 ENSGALG00000037258 6861 0.957 - - - - 0.957 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
68. LASP-2 LASP-2 4415 0.957 - - - - 0.957 - - - - -
69. RNF11 ENSGALG00000010539 8617 0.956 - - - - 0.956 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
70. MANF ENSGALG00000002362 7518 0.956 - - - - 0.956 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
71. SFRP2 ENSGALG00000009241 4716 0.956 - - - - 0.956 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
72. ASPM ENSGALG00000032398 12784 0.955 - - - - 0.955 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
73. EIF4G3 ENSGALG00000010084 5881 0.955 - - - - 0.955 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
74. TPP2 ENSGALG00000016865 7509 0.954 - - - - 0.954 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
75. TIA1 ENSGALG00000013879 16330 0.953 - - - - 0.953 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
76. MPPED1 ENSGALG00000014186 5726 0.953 - - - - 0.953 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
77. ANXA11 ENSGALG00000043826 5189 0.95 - - - - 0.950 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
78. TLK1 ENSGALG00000009569 5446 0.95 - - - - 0.950 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
79. NDUFB4 ENSGALG00000027688 8951 0.95 - - - - 0.950 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
80. BRCC3 ENSGALG00000005383 4844 0.949 - - - - 0.949 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
81. DYNC1LI1 ENSGALG00000011491 11011 0.948 - - - - 0.948 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
82. HNRNPLL ENSGALG00000008504 14719 0.947 - - - - 0.947 - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
83. COPA ENSGALG00000009153 11618 0.947 - - - - 0.947 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
84. DECR1 ENSGALG00000036990 6360 0.946 - - - - 0.946 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
85. CCDC101 CCDC101 9111 0.945 - - - - 0.945 - - - - -
86. RSU1 ENSGALG00000040891 12561 0.944 - - - - 0.944 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
87. ZC3H15 ENSGALG00000041857 19808 0.943 - - - - 0.943 - - - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
88. DIABLO ENSGALG00000004412 9499 0.943 - - - - 0.943 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
89. SRSF6 ENSGALG00000000990 12424 0.939 - - - - 0.939 - - - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
90. MTA1 ENSGALG00000002803 11572 0.939 - - - - 0.939 - - - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
91. FOXK2 ENSGALG00000001577 6346 0.938 - - - - 0.938 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
92. CKAP5 ENSGALG00000008325 8494 0.937 - - - - 0.937 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
93. RBM5 30998 0.936 - - - - 0.936 - - - - - RNA binding motif protein 5, transcript variant X1
94. CLTC ENSGALG00000005139 22130 0.935 - - - - 0.935 - - - - - clathrin heavy chain [Source:NCBI gene;Acc:395272]
95. GMNN ENSGALG00000013626 15838 0.935 - - - - 0.935 - - - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
96. LAP3 ENSGALG00000006334 21076 0.934 - - - - 0.934 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
97. BAMBI ENSGALG00000040993 7562 0.934 - - - - 0.934 - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
98. LSM6 ENSGALG00000009985 18582 0.933 - - - - 0.933 - - - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
99. CCNYL1 ENSGALG00000008485 11958 0.932 - - - - 0.932 - - - - - cyclin Y like 1
100. EIF3J ENSGALG00000008187 43570 0.93 - - - - 0.930 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]

There are 276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA