Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMPDL3B

Gene Name Gene ID Reads Annotation
SMPDL3B ENSGALG00000000737 223 sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]











Genes with expression patterns similar to SMPDL3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMPDL3B ENSGALG00000000737 223 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
2. CLCN7 ENSGALG00000030826 3173 1.85 - - - - - - - 0.982 0.868 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
3. SMARCD2 ENSGALG00000029304 11867 1.686 - - - - - - - 0.883 0.803 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
4. NCF1 ENSGALG00000001189 334 1.64 - - - - - - 0.782 - 0.858 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
5. KAT6B ENSGALG00000005035 301 0.998 - - - - - - - 0.998 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
6. SLC16A9 ENSGALG00000003172 266 0.998 - - - - - - - 0.998 - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
7. KIAA1239 KIAA1239 263 0.998 - - - - - - - 0.998 - -
8. ZNF142 ENSGALG00000011393 2078 0.997 - - - - - - - 0.997 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
9. PIBPPDD4L ENSGALG00000003345 1689 0.997 - - - - - - - 0.997 - - 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4-like
10. DCUN1D2 ENSGALG00000029145 2414 0.997 - - - - - - - 0.997 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
11. FAM92A1 FAM92A1 511 0.996 - - - - - - - 0.996 - -
12. ENSGALG00000003847 ENSGALG00000003847 1220 0.996 - - - - - - - 0.996 - -
13. DAB1 ENSGALG00000010857 1085 0.996 - - - - - - - 0.996 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
14. FER1L6 ENSGALG00000033783 196 0.996 - - - - - - - 0.996 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
15. SMPD2 ENSGALG00000033245 462 0.996 - - - - - - - 0.996 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
16. ARHGAP12 ENSGALG00000007254 479 0.996 - - - - - - - 0.996 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
17. TRAFD1 ENSGALG00000043208 1009 0.995 - - - - - - - 0.995 - - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
18. CHTF18 ENSGALG00000040157 2140 0.994 - - - - - - - 0.994 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
19. STAU2 ENSGALG00000031390 2008 0.994 - - - - - - - 0.994 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
20. ZNF652 ENSGALG00000001279 1188 0.994 - - - - - - - 0.994 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
21. LGALS1_1 ENSGALG00000012420 1560 0.994 - - - - - - - 0.994 - - galectin 1 [Source:NCBI gene;Acc:396491]
22. MCAT ENSGALG00000034275 4598 0.992 - - - - - - - 0.992 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
23. NF1 ENSGALG00000005660 1610 0.992 - - - - - - - 0.992 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
24. HNMT ENSGALG00000012377 227 0.992 - - - - - - - 0.992 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
25. ABCE1 ENSGALG00000009961 958 0.992 - - - - - - - 0.992 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
26. MACF1 ENSGALG00000003693 1043 0.991 - - - - - - - 0.991 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
27. SUV420H1 SUV420H1 2361 0.99 - - - - - - - 0.990 - -
28. MED12L ENSGALG00000010370 765 0.99 - - - - - - - 0.990 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
29. PARPBP ENSGALG00000012756 1895 0.989 - - - - - - - 0.989 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
30. ATG2B ENSGALG00000042088 918 0.989 - - - - - - - 0.989 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
31. NUDT4 ENSGALG00000011285 2998 0.989 - - - - - - - 0.989 - - nudix hydrolase 4, transcript variant X5
32. MST4 MST4 1931 0.988 - - - - - - - 0.988 - -
33. FAF1 ENSGALG00000010536 1522 0.985 - - - - - - - 0.985 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
34. WDYHV1 ENSGALG00000030059 2961 0.983 - - - - - - - 0.983 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
35. MICU1 ENSGALG00000004372 1978 0.983 - - - - - - - 0.983 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
36. ANO6 ENSGALG00000009638 470 0.982 - - - - - - - 0.982 - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
37. OFD1 ENSGALG00000016576 1916 0.982 - - - - - - - 0.982 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
38. CMTM7 ENSGALG00000011488 1406 0.981 - - - - - - - 0.981 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
39. PRKAB2 ENSGALG00000001678 1999 0.981 - - - - - - - 0.981 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
40. ZBTB24 ENSGALG00000015231 1384 0.979 - - - - - - - 0.979 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
41. SURF1 ENSGALG00000033754 2130 0.979 - - - - - - - 0.979 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
42. POLD3 ENSGALG00000017307 2136 0.978 - - - - - - - 0.978 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
43. SNTB1 ENSGALG00000034528 3907 0.978 - - - - - - - 0.978 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
44. KIF25 ENSGALG00000011299 2601 0.975 - - - - - - - 0.975 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
45. GNPAT ENSGALG00000011163 4286 0.974 - - - - - - - 0.974 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
46. CLUAP1 ENSGALG00000030877 4269 0.973 - - - - - - - 0.973 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
47. MPP5 ENSGALG00000009581 724 0.973 - - - - - - - 0.973 - - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
48. CUL5 ENSGALG00000017165 2480 0.972 - - - - - - - 0.972 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
49. ENSGALG00000009863 ENSGALG00000009863 7375 0.971 - - - - - - - 0.971 - -
50. OSR1 ENSGALG00000016473 1202 0.969 - - - - - - - 0.969 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
51. RPS6KA RPS6KA 6745 0.967 - - - - - - - 0.967 - -
52. ENSGALG00000017324 ENSGALG00000017324 8235 0.966 - - - - - - - 0.966 - -
53. NAPEPLD ENSGALG00000008285 1295 0.966 - - - - - - - 0.966 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
54. LSMD1 LSMD1 2562 0.964 - - - - - - - 0.964 - -
55. GTF2H4 GTF2H4 5227 0.963 - - - - - - - 0.963 - -
56. DMTF1 ENSGALG00000030844 3584 0.962 - - - - - - - 0.962 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
57. SUN1 ENSGALG00000003781 3442 0.962 - - - - - - - 0.962 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
58. C1orf50 ENSGALG00000004800 4894 0.957 - - - - - - - 0.957 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
59. TAF1B ENSGALG00000016437 2318 0.956 - - - - - - - 0.956 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
60. TRIP11 ENSGALG00000010763 3146 0.955 - - - - - - - 0.955 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
61. STX16 ENSGALG00000007541 6458 0.953 - - - - - - - 0.953 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
62. TMEM33 ENSGALG00000014248 6069 0.952 - - - - - - - 0.952 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
63. VWF ENSGALG00000017272 1012 0.949 - - - - - - - 0.949 - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
64. USP12P1 USP12P1 4193 0.949 - - - - - - - 0.949 - -
65. CDERMO-1 CDERMO-1 279 0.949 - - - - - - - - 0.949 -
66. MKP3 MKP3 4418 0.948 - - - - - - - 0.948 - -
67. PPM1B ENSGALG00000030691 4513 0.946 - - - - - - - 0.946 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
68. OSBPL1A ENSGALG00000015086 2702 0.945 - - - - - - - 0.945 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
69. PLA2G12A ENSGALG00000012185 5261 0.939 - - - - - - - 0.939 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
70. CENPI ENSGALG00000005038 2608 0.938 - - - - - - - 0.938 - - centromere protein I [Source:NCBI gene;Acc:395207]
71. FBXW5 ENSGALG00000030831 5927 0.932 - - - - - - - 0.932 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
72. ZMYM3 ENSGALG00000005533 2927 0.932 - - - - - - - 0.932 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
73. ESRRG ENSGALG00000009645 2783 0.928 - - - - - - - 0.928 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
74. XRCC3 ENSGALG00000011533 3768 0.922 - - - - - - - 0.922 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
75. SEMA6D ENSGALG00000030542 3780 0.921 - - - - - - - 0.921 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
76. VPS33A ENSGALG00000004440 2030 0.921 - - - - - - - - 0.921 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
77. PRRG1 ENSGALG00000016266 3473 0.92 - - - - - - - 0.920 - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
78. SLC7A6OS ENSGALG00000035575 2878 0.918 - - - - - - - - 0.918 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
79. MAP3K4 ENSGALG00000020003 6378 0.916 - - - - - - - 0.916 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
80. TMEM185A ENSGALG00000009139 4424 0.913 - - - - - - - 0.913 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
81. NCAPG ENSGALG00000014425 929 0.912 - - - - - - - - 0.912 - non-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]
82. GGA.16412 GGA.16412 846 0.911 - - - - - - - - 0.911 -
83. GPSM1 ENSGALG00000001797 943 0.905 - - - - - - - - 0.905 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
84. SIPA1L2 ENSGALG00000037506 3651 0.905 - - - - - - - 0.905 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
85. PDGF-A PDGF-A 5166 0.905 - - - - - - - 0.905 - -
86. MPP3 ENSGALG00000042521 1372 0.904 - - - - - - - - 0.904 - membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
87. TTPAL ENSGALG00000004244 2734 0.904 - - - - - - - 0.904 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
88. DIAPH1 DIAPH1 357 0.904 - - - - - - - - 0.904 -
89. NUDT6 ENSGALG00000011834 1309 0.899 - - - - - - - - 0.899 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
90. gga-mir-1737 ENSGALG00000025206 3910 0.898 - - - - - - - 0.898 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
91. CHMP2B ENSGALG00000015496 3973 0.898 - - - - - - - 0.898 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
92. RPS6KA5 ENSGALG00000030580 218 0.898 - - - - - - - - 0.898 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
93. TNNC1 ENSGALG00000001459 7110 0.897 - - - - - - - 0.897 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
94. DYNLT3 ENSGALG00000016259 340 0.896 - - - - - - - - 0.896 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
95. LAMB1 ENSGALG00000007905 7737 0.896 - - - - - - - 0.896 - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
96. GTPBP2 ENSGALG00000010315 1170 0.896 - - - - - - - 0.896 - - GTP binding protein 2
97. EARS2 ENSGALG00000006122 2072 0.895 - - - - - - - 0.895 - - glutamyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:427672]
98. DENND6A ENSGALG00000005656 831 0.894 - - - - - - - - 0.894 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
99. KIAA1211 ENSGALG00000013771 135 0.894 - - - - - - - - 0.894 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
100. GSTA GSTA 3130 0.894 - - - - - - - - 0.894 -

There are 333 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA