Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMPD4

Gene Name Gene ID Reads Annotation
SMPD4 ENSGALG00000006455 2270 sphingomyelin phosphodiesterase 4, transcript variant X1











Genes with expression patterns similar to SMPD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMPD4 ENSGALG00000006455 2270 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sphingomyelin phosphodiesterase 4, transcript variant X1
2. CEP78 ENSGALG00000015179 5227 1.722 - - - - - - 0.799 0.923 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
3. SRFBP1 ENSGALG00000005316 6826 0.988 - - - - - - - 0.988 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
4. gga-mir-1723 ENSGALG00000025386 6662 0.984 - - - - - - - 0.984 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
5. PLPPR1 ENSGALG00000015542 3179 0.984 - - - - - - - 0.984 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
6. SNX3 ENSGALG00000015304 1631 0.983 - - - - - - - 0.983 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
7. YOD1 ENSGALG00000037597 2989 0.983 - - - - - - - 0.983 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
8. C2CD5 ENSGALG00000013210 3060 0.982 - - - - - - - 0.982 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
9. NOL6 ENSGALG00000030730 7191 0.981 - - - - - - - 0.981 - - nucleolar protein 6
10. B4GALT3 ENSGALG00000022891 2825 0.981 - - - - - - - 0.981 - - beta-1,4-galactosyltransferase 3
11. GATAD2A ENSGALG00000042900 6337 0.981 - - - - - - - 0.981 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
12. HEATR6 ENSGALG00000005516 3347 0.981 - - - - - - - 0.981 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
13. LTN1 ENSGALG00000015804 3784 0.98 - - - - - - - 0.980 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
14. UBXN2B ENSGALG00000030585 2177 0.98 - - - - - - - 0.980 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
15. LDLRAP1 ENSGALG00000001051 1657 0.979 - - - - - - - 0.979 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
16. C1orf123 ENSGALG00000026516 3227 0.979 - - - - - - - 0.979 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
17. NPB NPB 8056 0.979 - - - - - - - 0.979 - -
18. C6ORF162 C6ORF162 4217 0.979 - - - - - - - 0.979 - -
19. RIPK1 ENSGALG00000012827 3405 0.979 - - - - - - - 0.979 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
20. CACTIN ENSGALG00000024391 1408 0.978 - - - - - - - 0.978 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
21. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.977 - - - - - - - 0.977 - -
22. THBS4 ENSGALG00000014804 4228 0.977 - - - - - - - 0.977 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
23. KLHL13 KLHL13 2712 0.977 - - - - - - - 0.977 - -
24. LAMA4 ENSGALG00000015001 993 0.976 - - - - - - - 0.976 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
25. ETAA1 ENSGALG00000027922 1684 0.976 - - - - - - - 0.976 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
26. PALD1 ENSGALG00000004465 3553 0.976 - - - - - - - 0.976 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
27. AK1 ENSGALG00000029150 5935 0.976 - - - - - - - 0.976 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
28. MEIS1 ENSGALG00000041626 3865 0.976 - - - - - - - 0.976 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
29. ARRDC2 ENSGALG00000003527 1797 0.976 - - - - - - - 0.976 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
30. SMAD2W ENSGALG00000014184 1773 0.975 - - - - - - - 0.975 - - SMAD family member 2-W, transcript variant X3
31. TDRD3 ENSGALG00000016936 3412 0.975 - - - - - - - 0.975 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
32. SKIV2L2 ENSGALG00000014709 2926 0.975 - - - - - - - 0.975 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
33. C4H4ORF41 C4H4ORF41 1520 0.975 - - - - - - - 0.975 - -
34. BLZF1 ENSGALG00000015225 3594 0.975 - - - - - - - 0.975 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
35. ILKAP ENSGALG00000006253 7388 0.975 - - - - - - - 0.975 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
36. ATRIP ENSGALG00000004670 3647 0.974 - - - - - - - 0.974 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
37. ARHGAP32 ENSGALG00000043511 7916 0.974 - - - - - - - 0.974 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
38. LRRFIP2 ENSGALG00000033102 8250 0.974 - - - - - - - 0.974 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
39. ARL1 ENSGALG00000011651 3230 0.974 - - - - - - - 0.974 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
40. SMAD1 ENSGALG00000009977 3540 0.974 - - - - - - - 0.974 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
41. ARID1B ENSGALG00000013683 3397 0.974 - - - - - - - 0.974 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
42. TMEM237 ENSGALG00000008381 1317 0.974 - - - - - - - 0.974 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
43. LIN28A ENSGALG00000036022 542 0.974 - - - - - - - 0.974 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
44. SPRYD7 ENSGALG00000017010 1910 0.973 - - - - - - - 0.973 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
45. PSD2 ENSGALG00000030836 236 0.973 - - - - - - - 0.973 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
46. FAAH ENSGALG00000010433 3309 0.973 - - - - - - - 0.973 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
47. SMU1 ENSGALG00000002014 8136 0.973 - - - - - - - 0.973 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
48. SEC24B ENSGALG00000035482 3430 0.972 - - - - - - - 0.972 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
49. ZUFSP 549 0.971 - - - - - - - 0.971 - - zinc finger with UFM1 specific peptidase domain
50. LEMD2 ENSGALG00000002870 2803 0.971 - - - - - - - 0.971 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
51. C11H19ORF12 C11H19ORF12 5149 0.971 - - - - - - - 0.971 - -
52. ARNT ENSGALG00000000751 3495 0.97 - - - - - - - 0.970 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
53. RERG ENSGALG00000028186 1124 0.97 - - - - - - - 0.970 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
54. GAS6 ENSGALG00000016820 481 0.97 - - - - - - - 0.970 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
55. THAP5 ENSGALG00000009494 6540 0.97 - - - - - - - 0.970 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
56. MYO3A ENSGALG00000007647 643 0.969 - - - - - - - 0.969 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
57. CDK14 ENSGALG00000009062 995 0.969 - - - - - - - 0.969 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
58. PTN ENSGALG00000040493 864 0.969 - - - - - - - 0.969 - - pleiotrophin [Source:NCBI gene;Acc:418125]
59. PIK3R3 ENSGALG00000010335 374 0.968 - - - - - - - 0.968 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
60. ARHGEF12 ENSGALG00000006663 1369 0.968 - - - - - - - 0.968 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
61. HTRA1 ENSGALG00000041140 1750 0.968 - - - - - - - 0.968 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
62. PLEKHA3 ENSGALG00000009135 1700 0.968 - - - - - - - 0.968 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
63. PCP4 ENSGALG00000022819 880 0.968 - - - - - - - 0.968 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
64. DENND1A ENSGALG00000001157 503 0.968 - - - - - - - 0.968 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
65. PRPSAP2 ENSGALG00000005064 5549 0.968 - - - - - - - 0.968 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
66. SEMA5B ENSGALG00000011686 4184 0.968 - - - - - - - 0.968 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
67. FNDC5 ENSGALG00000003567 3328 0.967 - - - - - - - 0.967 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
68. PTER ENSGALG00000008728 162 0.967 - - - - - - - 0.967 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
69. GID8 ENSGALG00000005700 3992 0.967 - - - - - - - 0.967 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
70. SEMA7A ENSGALG00000001412 1505 0.967 - - - - - - - 0.967 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
71. ENSGALG00000029113 ENSGALG00000029113 737 0.967 - - - - - - - 0.967 - -
72. GALNT2 ENSGALG00000011106 167 0.966 - - - - - - - 0.966 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
73. TMEM245 ENSGALG00000013138 501 0.966 - - - - - - - 0.966 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
74. C14orf105 C14orf105 135 0.966 - - - - - - - 0.966 - -
75. AEN ENSGALG00000044204 2633 0.966 - - - - - - - 0.966 - - apoptosis enhancing nuclease, transcript variant X1
76. RFLB RFLB 140 0.966 - - - - - - - 0.966 - -
77. H2AFY2 ENSGALG00000004794 576 0.966 - - - - - - - 0.966 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
78. MMP16 ENSGALG00000032031 827 0.966 - - - - - - - 0.966 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
79. CTNNBIP1 ENSGALG00000026306 8049 0.966 - - - - - - - 0.966 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
80. CUL4B ENSGALG00000008559 16864 0.966 - - - - - - - 0.966 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
81. TMEM47 ENSGALG00000027198 3619 0.965 - - - - - - - 0.965 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
82. TAF7 4725 0.963 - - - - - - - 0.963 - - TATA-box binding protein associated factor 7, transcript variant X1
83. HNRNPK ENSGALG00000012591 1109 0.963 - - - - - - - 0.963 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
84. HIBADH ENSGALG00000033207 3540 0.963 - - - - - - - 0.963 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
85. SYAP1 ENSGALG00000016548 3347 0.962 - - - - - - - 0.962 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
86. MLX ENSGALG00000003199 5286 0.961 - - - - - - - 0.961 - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
87. TMEM144 ENSGALG00000026253 1744 0.96 - - - - - - - 0.960 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
88. RAD50 ENSGALG00000006794 4308 0.96 - - - - - - - 0.960 - - RAD50 double strand break repair protein, transcript variant X4
89. PAXIP1 ENSGALG00000036064 3120 0.958 - - - - - - - 0.958 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
90. ENSGALG00000007355 ENSGALG00000007355 2149 0.958 - - - - - - - 0.958 - -
91. CDXB CDXB 143 0.957 - - - - - - - 0.957 - -
92. HSDL2 ENSGALG00000015663 8966 0.957 - - - - - - - 0.957 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
93. DNTTIP1 ENSGALG00000003575 4687 0.957 - - - - - - - 0.957 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
94. SGPL1 ENSGALG00000004553 4520 0.956 - - - - - - - 0.956 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
95. SPATS2L ENSGALG00000008152 3037 0.952 - - - - - - - 0.952 - - spermatogenesis associated serine rich 2 like [Source:NCBI gene;Acc:424067]
96. AHR ENSGALG00000010836 2276 0.951 - - - - - - - 0.951 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
97. NAP1L4 ENSGALG00000006446 10868 0.947 - - - - - - - 0.947 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
98. SH3GLB1 ENSGALG00000006284 12764 0.941 - - - - - - - 0.941 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
99. PRMT3 ENSGALG00000003958 14160 0.937 - - - - - - - 0.937 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
100. CZH9ORF80 CZH9ORF80 12760 0.936 - - - - - - - 0.936 - -

There are 80 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA