Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMOC1

Gene Name Gene ID Reads Annotation
SMOC1 ENSGALG00000009415 2403 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]











Genes with expression patterns similar to SMOC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMOC1 ENSGALG00000009415 2403 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
2. CYP1B1 ENSGALG00000025822 3143 2.646 - - 0.889 - - - - - 0.946 0.811 cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
3. COL9A3 ENSGALG00000005628 2842 2.391 - - 0.824 - - - - - 0.834 0.733 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
4. ACTC1 ENSGALG00000009844 20914 2.374 - - 0.787 - - - - - 0.742 0.845 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
5. gga-mir-7474 ENSGALG00000033766 5727 2.338 - - 0.724 - - - - - 0.799 0.815 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
6. LECT1 LECT1 12694 2.314 - - 0.761 - - - - - 0.774 0.779
7. WWP2 ENSGALG00000000699 5040 2.23 - - 0.722 - - - - - 0.760 0.748 WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
8. PAX1 ENSGALG00000039040 3339 1.702 - - 0.850 - - - - - - 0.852 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
9. TRIM55 ENSGALG00000041327 1097 1.632 - - 0.791 - - - - - - 0.841 tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
10. MYL3 ENSGALG00000005448 3379 1.63 - - 0.759 - - - - - 0.871 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
11. SOX9 ENSGALG00000004386 14802 1.585 - - 0.829 - - - - - 0.756 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
12. SHH ENSGALG00000006379 1943 1.558 - - 0.796 - - - - - 0.762 - sonic hedgehog [Source:NCBI gene;Acc:395615]
13. LIMCH1 ENSGALG00000014258 1987 1.557 - - - - - - 0.760 - 0.797 - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
14. TNNC2 ENSGALG00000006835 2963 1.556 - - 0.787 - - - - - 0.769 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
15. EMILIN3 ENSGALG00000030012 6200 1.552 - - 0.816 - - - - - 0.736 - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
16. JSC JSC 7982 1.55 - - - - - 0.775 - - - 0.775
17. MYOG ENSGALG00000000172 460 1.55 - - - - - - - - 0.821 0.729 myogenin [Source:NCBI gene;Acc:374004]
18. MYOD1 ENSGALG00000006216 568 1.545 - - 0.701 - - - - - - 0.844 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
19. C9H2ORF82 ENSGALG00000040264 4201 1.539 - - 0.751 - - - - - 0.788 - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
20. TMEM182 ENSGALG00000038936 274 1.532 - - 0.764 - - - - - 0.768 - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
21. COL8A1 ENSGALG00000015253 2505 1.528 - - 0.743 - - - - - 0.785 - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
22. NTM ENSGALG00000001437 584 1.521 - - 0.742 - - 0.779 - - - - neurotrimin [Source:NCBI gene;Acc:395450]
23. TNNT3 ENSGALG00000006572 1652 1.52 - - 0.746 - - - - - - 0.774 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
24. TNNI1 ENSGALG00000000313 4069 1.508 - - 0.753 - - - - - - 0.755 troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
25. SCARA3 ENSGALG00000026651 2559 1.497 - - 0.755 - - - - - 0.742 - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
26. TIMP3 ENSGALG00000028627 8706 1.489 - - 0.744 - - - - - 0.745 - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
27. SPOCK1 ENSGALG00000006258 2892 1.482 - - 0.715 - - - - - - 0.767 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]
28. LYAR ENSGALG00000015000 10756 1.476 - - - - - 0.735 0.741 - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
29. OPTC ENSGALG00000003554 3698 1.467 - - - - - 0.728 0.739 - - - opticin [Source:NCBI gene;Acc:395130]
30. CCDC141 ENSGALG00000020788 606 1.465 - - - - - - - - 0.755 0.710 coiled-coil domain containing 141, transcript variant X5
31. TMEM108 ENSGALG00000036412 2903 1.44 - - - - - 0.708 - - - 0.732 transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
32. B4GALT3 ENSGALG00000022891 2825 0.917 - - - - - - 0.917 - - - beta-1,4-galactosyltransferase 3
33. ITSN1 ENSGALG00000036677 5727 0.905 - - - - - - 0.905 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
34. SPG11 ENSGALG00000008180 1890 0.902 - - - - - - 0.902 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
35. GAS6 ENSGALG00000016820 481 0.902 - - - - - - 0.902 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
36. LDHB ENSGALG00000035836 169726 0.898 - - - - - 0.898 - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
37. SCAF4 ENSGALG00000033965 2027 0.896 - - - - - - 0.896 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
38. TUBA4A ENSGALG00000000433 1367 0.895 - - - - - - 0.895 - - - tubulin alpha 4a
39. WDSUB1 ENSGALG00000012574 2038 0.893 - - - - - - 0.893 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
40. UBE3B ENSGALG00000013851 1672 0.89 - - - - - - 0.890 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
41. FTSJ2 FTSJ2 2951 0.889 - - - - - - 0.889 - - -
42. PGAP2 ENSGALG00000027762 2583 0.888 - - - - - - 0.888 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
43. RPIA ENSGALG00000015960 2784 0.886 - - - - - - 0.886 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
44. SDK2 ENSGALG00000031895 2682 0.885 - - - - - - 0.885 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
45. BPHL ENSGALG00000029659 501 0.884 - - - - - - 0.884 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
46. ZFYVE19 ENSGALG00000008460 2750 0.883 - - - - - - 0.883 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
47. NSMCE4A ENSGALG00000009504 1302 0.882 - - - - - - 0.882 - - - NSE4 homolog A, SMC5-SMC6 complex component
48. ENSGALG00000013233 ENSGALG00000013233 3265 0.879 - - - - - - 0.879 - - -
49. FAM183A 242 0.879 - - - - - - 0.879 - - - family with sequence similarity 183 member A, transcript variant 2
50. DNAJC16 ENSGALG00000032832 750 0.876 - - - - - - 0.876 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
51. GPN3 ENSGALG00000003807 6320 0.875 - - - - - - 0.875 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
52. PKN3 532 0.874 - - - - - - 0.874 - - - protein kinase N3, transcript variant X2
53. ENSGALG00000002852 ENSGALG00000002852 2687 0.873 - - - - - - 0.873 - - -
54. CEP290 ENSGALG00000011177 1559 0.872 - - - - - - 0.872 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
55. ENSGALG00000016099 ENSGALG00000016099 138 0.87 - - - - - - 0.870 - - -
56. SNORA31 SNORA31 183 0.87 - - - - - - 0.870 - - -
57. NCAPG2 ENSGALG00000006525 2319 0.87 - - - - - - 0.870 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
58. ENSGALG00000003619 ENSGALG00000003619 58 0.869 - - - - - - 0.869 - - -
59. MBTPS1 ENSGALG00000003293 4843 0.868 - - - - - - 0.868 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
60. NSRP1 ENSGALG00000004186 1683 0.868 - - - - - - 0.868 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
61. GRB14 ENSGALG00000020703 42 0.868 - - - - - - 0.868 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
62. HESX1 ENSGALG00000005506 203 0.867 - - - - - - 0.867 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
63. TOP3B ENSGALG00000030051 5953 0.867 - - - - - - 0.867 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
64. MXRA5 ENSGALG00000016635 352 0.866 - - - - - - 0.866 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
65. METTL24 ENSGALG00000041120 60 0.865 - - - - - - 0.865 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
66. COPS8 ENSGALG00000033385 10166 0.865 - - - - - - 0.865 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
67. HEMK1 ENSGALG00000002253 40 0.865 - - - - - - 0.865 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
68. PLCE1 ENSGALG00000039528 151 0.864 - - - - - - 0.864 - - - phospholipase C epsilon 1
69. SGSM3 ENSGALG00000012033 1839 0.864 - - - - - - 0.864 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
70. SCUBE1 ENSGALG00000014178 91 0.864 - - - - - - 0.864 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
71. PTN ENSGALG00000040493 864 0.864 - - - - - - 0.864 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
72. ENSGALG00000026925 ENSGALG00000026925 119 0.864 - - - - - - 0.864 - - -
73. TCTE1 ENSGALG00000010165 65 0.864 - - - - - - 0.864 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
74. MPST ENSGALG00000040840 2122 0.864 - - - - - - 0.864 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
75. TM2D3 ENSGALG00000026271 2566 0.863 - - - - - - 0.863 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
76. ACTN2 ENSGALG00000014463 1724 0.862 - - - - - - - - 0.862 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
77. ECHDC3 ENSGALG00000006690 1299 0.862 - - - - - - 0.862 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
78. MIF ENSGALG00000006326 109683 0.861 - - - - - 0.861 - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
79. MBNL2 ENSGALG00000016890 3162 0.861 - - - - - - 0.861 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
80. LFNG ENSGALG00000038515 5178 0.86 - - - - - - 0.860 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
81. NIN ENSGALG00000012361 2284 0.859 - - - - - - 0.859 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
82. PLEKHA3 ENSGALG00000009135 1700 0.859 - - - - - - 0.859 - - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
83. MESDC1 1013 0.859 - - - - - - 0.859 - - - mesoderm development candidate 1
84. ERMP1 ENSGALG00000000438 1136 0.858 - - - - - - 0.858 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
85. EN1 ENSGALG00000042389 3051 0.858 - - 0.858 - - - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
86. PIK3R3 ENSGALG00000010335 374 0.857 - - - - - - 0.857 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
87. ENTPD8L ENSGALG00000008936 731 0.856 - - - - - - 0.856 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
88. ENSGALG00000028164 ENSGALG00000028164 3325 0.855 - - - - - - 0.855 - - -
89. C1QTNF3 ENSGALG00000027887 8646 0.855 - - 0.855 - - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
90. TCF15 ENSGALG00000026276 3646 0.854 - - 0.854 - - - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
91. GGA.8379 GGA.8379 4419 0.854 - - - - - - 0.854 - - -
92. RBM34 ENSGALG00000029915 5618 0.854 - - - - - - 0.854 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
93. MORC3 ENSGALG00000036556 2976 0.852 - - - - - - 0.852 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
94. COL9A2 ENSGALG00000027526 4685 0.852 - - 0.852 - - - - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
95. FAM57A ENSGALG00000004820 1492 0.852 - - - - - - 0.852 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
96. DNAJC12 ENSGALG00000002769 1418 0.851 - - - - - - 0.851 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
97. OCRL ENSGALG00000003920 1812 0.851 - - - - - - 0.851 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
98. CCNL1 ENSGALG00000009699 1033 0.85 - - - - - - 0.850 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
99. UPK3BL ENSGALG00000001885 1650 0.848 - - - - - - 0.848 - - - uroplakin 3B-like
100. BHMT ENSGALG00000004518 4700 0.848 - - - - - - - - - 0.848 betaine--homocysteine S-methyltransferase

There are 294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA