Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMOC1

Gene Name Gene ID Reads Annotation
SMOC1 ENSDARG00000088255 507 SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]










Genes with expression patterns similar to SMOC1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMOC1 ENSDARG00000088255 507 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
2. shha ENSDARG00000068567, ENSDARG00000111447 1497 2.285 0.860 0.709 - - - - 0.716 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
3. CABZ01079764.1 CABZ01079764.1 12103 2.178 0.731 0.733 - - - - 0.714 - -
4. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 1.679 0.935 - - - - - 0.744 - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
5. BX323459.1 ENSDARG00000109508 1476 1.597 0.766 0.831 - - - - - - -
6. EXD1 ENSDARG00000098669 27 1.582 - 0.872 - 0.710 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
7. MYL2 MYL2 7 1.572 - 0.862 - 0.710 - - - - -
8. mcm5_1 ENSDARG00000019507 10 1.572 - 0.862 - 0.710 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
9. lgals1l1 ENSDARG00000088711 4515 1.555 0.734 - - - - - 0.821 - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
10. tspan12 ENSDARG00000032389 419 1.549 0.800 0.749 - - - - - - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
11. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.541 0.806 - - - - - 0.735 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
12. ntla ntla 926 1.536 0.823 - - - - - 0.713 - -
13. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 1.528 0.796 - - - - - 0.732 - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
14. casq1b ENSDARG00000018105 2643 1.522 0.736 0.786 - - - - - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
15. col11a2 ENSDARG00000012422 3204 1.516 0.784 - - - - - 0.732 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
16. mxra8a ENSDARG00000062222 530 1.511 0.743 - - - - - - 0.768 - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
17. PAQR4 PAQR4 2150 1.51 0.802 - - - - - 0.708 - -
18. tgfb3 ENSDARG00000019367 2327 1.507 0.765 - - - - - 0.742 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
19. nkx3.2 ENSDARG00000037639 575 1.502 0.740 - - - - - 0.762 - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
20. chad ENSDARG00000045071 903 1.497 0.770 - - - - - 0.727 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
21. si:ch1073-184j22.2 ENSDARG00000078598 707 1.496 - 0.793 - - - 0.703 - - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
22. notum2 ENSDARG00000088411 823 1.478 0.762 - - - - - 0.716 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
23. BX470254.1 ENSDARG00000097402 1389 1.477 0.770 - - - - - 0.707 - -
24. loxl3b ENSDARG00000039563 1657 1.467 0.766 - - - - 0.701 - - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
25. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.46 0.729 - - - - - 0.731 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
26. efemp2a ENSDARG00000094324 39261 1.458 0.744 - - - - - - 0.714 - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
27. TENC1 TENC1 1729 1.455 0.720 - - - - - 0.735 - -
28. myh7bb ENSDARG00000035322 287 1.446 - 0.742 - - - - 0.704 - - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
29. BX842614.2 BX842614.2 799 1.436 0.701 - - - - - 0.735 - -
30. zgc:113142 ENSDARG00000038969 74 1.43 - 0.723 - - - - 0.707 - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
31. si:dkey-203c4.2 si:dkey-203c4.2 4 1.422 - 0.712 - 0.710 - - - - -
32. CABZ01074309.1 CABZ01074309.1 121 1.415 - 0.710 - - - - 0.705 - -
33. pax7b ENSDARG00000070818 282 0.93 - 0.930 - - - - - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
34. ZBTB40 ENSDARG00000091762 57 0.925 - 0.925 - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
35. s100a1 ENSDARG00000015543 274 0.923 - 0.923 - - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
36. spsb4a ENSDARG00000016084, ENSDARG00000116235 544 0.907 - 0.907 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]
37. C17H15orf41 C17H15orf41 313 0.906 - 0.906 - - - - - - -
38. b3galnt2 ENSDARG00000046133 68 0.905 - 0.905 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
39. nhlh2 ENSDARG00000025495 1860 0.904 - 0.904 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
40. bhlhe22 ENSDARG00000058039 1673 0.904 - 0.904 - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
41. ROBO3_1 ROBO3_1 468 0.903 - 0.903 - - - - - - -
42. pkmb ENSDARG00000099860 25094 0.896 0.896 - - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
43. heca ENSDARG00000042877 200 0.894 - 0.894 - - - - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
44. MUSTN1 MUSTN1 1882 0.893 0.893 - - - - - - - -
45. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.889 - 0.889 - - - - - - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
46. mapk15 ENSDARG00000100822 157 0.888 - 0.888 - - - - - - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
47. slc22a7a ENSDARG00000056028 2426 0.886 - 0.886 - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
48. dlg2 ENSDARG00000099323 162 0.886 - 0.886 - - - - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
49. UBASH3B_1 UBASH3B_1 28 0.883 - 0.883 - - - - - - -
50. col9a2 ENSDARG00000024492 20234 0.88 0.880 - - - - - - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
51. cmn ENSDARG00000055527 14039 0.879 0.879 - - - - - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
52. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 0.878 0.878 - - - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
53. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 0.878 - 0.878 - - - - - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
54. ZNF784 ZNF784 51 0.875 - 0.875 - - - - - - -
55. zgc:110130 ENSDARG00000039203 352 0.875 - 0.875 - - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
56. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 0.874 0.874 - - - - - - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
57. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 0.874 - 0.874 - - - - - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
58. si:dkey-10f21.16 si:dkey-10f21.16 252 0.872 - 0.872 - - - - - - -
59. PDGFB PDGFB 259 0.867 - 0.867 - - - - - - -
60. CABZ01074435.1 CABZ01074435.1 4551 0.865 0.865 - - - - - - - -
61. dmrt1 ENSDARG00000007349 16 0.862 - 0.862 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
62. RNaseP_nuc RNaseP_nuc 7 0.862 - 0.862 - - - - - - -
63. cacng2a ENSDARG00000032565 99 0.862 - 0.862 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
64. fermt3a fermt3a 56 0.862 - 0.862 - - - - - - -
65. MLLT4 MLLT4 67 0.862 - 0.862 - - - - - - -
66. scg2b ENSDARG00000038574 345 0.862 - 0.862 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
67. zgc:165627 zgc:165627 4 0.862 - 0.862 - - - - - - -
68. CABZ01057951.1 CABZ01057951.1 10 0.862 - 0.862 - - - - - - -
69. si:ch211-57m13.9 ENSDARG00000095884 10 0.862 - 0.862 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
70. il12bb ENSDARG00000054542 6 0.862 - 0.862 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
71. RFESD ENSDARG00000058725 27 0.862 - 0.862 - - - - - - - Rieske (Fe-S) domain containing [Source:ZFIN;Acc:ZDB-GENE-050417-254]
72. thbs2a ENSDARG00000060410 0 0.862 - 0.862 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]
73. SNORD30 SNORD30 34 0.862 - 0.862 - - - - - - -
74. kif20a ENSDARG00000044491 12 0.862 - 0.862 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
75. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 0.862 - 0.862 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
76. si:ch1073-143l10.2 ENSDARG00000094899 32 0.862 - 0.862 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
77. hsp70l_1 ENSDARG00000055723 72 0.862 - 0.862 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
78. NFATC4 ENSDARG00000054162 44 0.862 - 0.862 - - - - - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
79. fez1 ENSDARG00000023174 701 0.862 - 0.862 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
80. erap2 ENSDARG00000098618 16 0.862 - 0.862 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
81. alp3 ENSDARG00000098063 0 0.862 - 0.862 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
82. SMARCA4 ENSDARG00000104339 48 0.862 - 0.862 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
83. ABHD12B_1 ABHD12B_1 57 0.862 - 0.862 - - - - - - -
84. ZNF337_11 ZNF337_11 11 0.862 - 0.862 - - - - - - -
85. si:dkey-199m13.8 si:dkey-199m13.8 61 0.862 - 0.862 - - - - - - -
86. fam5b fam5b 45 0.862 - 0.862 - - - - - - -
87. zgc:173593 ENSDARG00000077360 10 0.862 - 0.862 - - - - - - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
88. kcnc3b ENSDARG00000098816 0 0.862 - 0.862 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 3b [Source:ZFIN;Acc:ZDB-GENE-100901-2]
89. igsf5 igsf5 85 0.862 - 0.862 - - - - - - -
90. pja2 ENSDARG00000100296 1 0.862 - 0.862 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
91. pcbp3 ENSDARG00000054378 74 0.862 - 0.862 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
92. ABCC6 ABCC6 5 0.862 - 0.862 - - - - - - -
93. CABZ01021538.1 CABZ01021538.1 67 0.862 - 0.862 - - - - - - -
94. urgcp ENSDARG00000036767 6 0.862 - 0.862 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
95. PTGR2 ENSDARG00000070673 43 0.862 - 0.862 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
96. n6amt2 7 0.862 - 0.862 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
97. ccr6a ENSDARG00000087474 10 0.862 - 0.862 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
98. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 0.862 - 0.862 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
99. galr1 galr1 9 0.862 - 0.862 - - - - - - -
100. FBXO40_1 FBXO40_1 59 0.862 - 0.862 - - - - - - -

There are 899 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA