Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMO

Gene Name Gene ID Reads Annotation
SMO ENSGALG00000036114 6559 smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]











Genes with expression patterns similar to SMO

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMO ENSGALG00000036114 6559 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
2. NDUFV1 ENSGALG00000042809 6222 0.847 - - - - - - - 0.847 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
3. gga-mir-6599 ENSGALG00000028121 4746 0.836 - - - - - - - 0.836 - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
4. SPPL3 ENSGALG00000006979 3264 0.831 - - - - - - - 0.831 - - signal peptide peptidase like 3 [Source:HGNC Symbol;Acc:HGNC:30424]
5. C14H16ORF42 C14H16ORF42 263 0.831 - - - - - - - 0.831 - -
6. CCDC86 ENSGALG00000036935 5280 0.813 - - - - - - - 0.813 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
7. SEC14L1 ENSGALG00000001684 2776 0.812 - - - - - - - 0.812 - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
8. FURIN ENSGALG00000008341 2609 0.808 - - - - - - - 0.808 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
9. HDAC11 ENSGALG00000005092 176 0.803 - - - - - - - 0.803 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
10. INA ENSGALG00000028238 208 0.801 - - - - - - - 0.801 - - internexin neuronal intermediate filament protein alpha
11. NSUN5 ENSGALG00000000891 1356 0.799 - - - - - - - 0.799 - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
12. GGA.16412 GGA.16412 846 0.798 - - - - - - - 0.798 - -
13. GFRA1 ENSGALG00000009173 371 0.798 - - - - - - - 0.798 - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
14. TRAF-5 TRAF-5 102 0.797 - - - - - - - 0.797 - -
15. ENSGALG00000023731 ENSGALG00000023731 149 0.796 - - - - - - - 0.796 - -
16. PEX12 ENSGALG00000002151 953 0.792 - - - - - - - 0.792 - - peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:HGNC:8854]
17. KRT20 ENSGALG00000019716 11 0.79 - - - - - - - 0.790 - - keratin 20 [Source:NCBI gene;Acc:420045]
18. KIAA0513 ENSGALG00000025938 46 0.789 - - - - - - - 0.789 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
19. PDGFB ENSGALG00000012178 509 0.788 - - - - - - - 0.788 - - platelet-derived growth factor beta polypeptide [Source:NCBI gene;Acc:374128]
20. CCDC50 ENSGALG00000020813 739 0.788 - - - - - - - 0.788 - - coiled-coil domain containing 50 [Source:NCBI gene;Acc:424906]
21. DZANK1 ENSGALG00000008731 120 0.786 - - - - - - - 0.786 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
22. PTPRD ENSGALG00000015058 37 0.786 - - - - - - - 0.786 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
23. KLRD1 ENSGALG00000014722 27 0.786 - - - - - - - 0.786 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
24. AQP12 AQP12 11 0.784 - - - - - - - 0.784 - -
25. ABCC4 ENSGALG00000016896 154 0.783 - - - - - - - 0.783 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
26. TP53I3 ENSGALG00000016502 178 0.783 - - - - - - - 0.783 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
27. ZIC3 ENSGALG00000031144 863 0.782 - - - - - - - 0.782 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
28. CD4 ENSGALG00000014477 19 0.781 - - - - - - - 0.781 - - CD4 molecule [Source:NCBI gene;Acc:395362]
29. MAPT ENSGALG00000000625 659 0.781 - - - - - - - 0.781 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
30. IRG1 IRG1 21 0.78 - - - - - - - 0.780 - -
31. LRSAM1 ENSGALG00000008819 2068 0.78 - - - - - - - 0.780 - - leucine rich repeat and sterile alpha motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25135]
32. GFAP ENSGALG00000000909 21 0.78 - - - - - - - 0.780 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
33. ICOS ENSGALG00000008656 27 0.779 - - - - - - - 0.779 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
34. HAVCR1 ENSGALG00000017362 25 0.779 - - - - - - - 0.779 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
35. RNASET2 ENSGALG00000011426 40 0.779 - - - - - - - 0.779 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
36. SDR42E2 ENSGALG00000006964 57 0.777 - - - - - - - 0.777 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
37. USP53 ENSGALG00000011990 12 0.777 - - - - - - - 0.777 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
38. PAK2 ENSGALG00000006426 283 0.777 - - - - - - - 0.777 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
39. GPR61 ENSGALG00000040168 70 0.776 - - - - - - - 0.776 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
40. UEVLD ENSGALG00000006342 164 0.775 - - - - - - - 0.775 - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
41. LOC417973 ENSGALG00000019325 9 0.774 - - - - - - - 0.774 - - uncharacterized LOC417973, transcript variant X1
42. CCDC96 9 0.774 - - - - - - - 0.774 - - coiled-coil domain containing 96
43. APOAIV APOAIV 5 0.774 - - - - - - - 0.774 - -
44. GINS3 ENSGALG00000031209 32 0.774 - - - - - - - 0.774 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
45. PLB1 PLB1 101 0.774 - - - - - - - 0.774 - -
46. FOXP4 ENSGALG00000033497 13 0.774 - - - - - - - 0.774 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
47. LOC419074 ENSGALG00000017336 1885 0.774 - - - - - - - 0.774 - - F-box/WD repeat-containing protein 7-like, transcript variant X3
48. STAB1 21 0.774 - - - - - - - 0.774 - - stabilin 1, transcript variant X2
49. ACAP3 ENSGALG00000033293 605 0.774 - - - - - - - 0.774 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
50. ENSGALG00000019053 ENSGALG00000019053 8 0.774 - - - - - - - 0.774 - -
51. TMCO4 ENSGALG00000004081 31 0.773 - - - - - - - 0.773 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
52. ABCA8 ENSGALG00000021399 11 0.773 - - - - - - - 0.773 - - ATP binding cassette subfamily A member 8
53. RIPK4 ENSGALG00000040189 102 0.772 - - - - - - - 0.772 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
54. ASB13 ENSGALG00000008401 181 0.771 - - - - - - - 0.771 - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
55. NXPH2 ENSGALG00000029083 353 0.771 - - - - - - - 0.771 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
56. NRIP3 ENSGALG00000005903 58 0.77 - - - - - - - 0.770 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
57. MRPL16 ENSGALG00000029419 8033 0.769 - - - - - - 0.769 - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
58. UCK1 ENSGALG00000003732 2325 0.768 - - - - - - - 0.768 - - uridine-cytidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:14859]
59. CD200R1A CD200R1A 105 0.768 - - - - - - - 0.768 - -
60. DNAI2 ENSGALG00000004495 45 0.768 - - - - - - - 0.768 - - dynein axonemal intermediate chain 2
61. STXBP1 ENSGALG00000040003 157 0.767 - - - - - - - 0.767 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
62. ENSGALG00000019522 ENSGALG00000019522 122 0.767 - - - - - - - 0.767 - -
63. ANKRD44 ENSGALG00000007996 17 0.766 - - - - - - - 0.766 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
64. LCA5L ENSGALG00000016125 99 0.766 - - - - - - - 0.766 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
65. ACTG1_1 ENSGALG00000001381 64662 0.765 - - - - - 0.765 - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
66. SGMS1 ENSGALG00000003701 2459 0.763 - - - - - - - 0.763 - - sphingomyelin synthase 1 [Source:NCBI gene;Acc:378907]
67. CX3CR1 ENSGALG00000038000 48 0.763 - - - - - - - 0.763 - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
68. ARHGAP25 ENSGALG00000035194 74 0.763 - - - - - - - 0.763 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
69. ADCYAP1R1 ENSGALG00000005223 114 0.76 - - - - - - - 0.760 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
70. TNFIP6 TNFIP6 3024 0.76 - - - - - - - 0.760 - -
71. EPB41L4A ENSGALG00000000234 113 0.758 - - - - - - - 0.758 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
72. ITGB3 ENSGALG00000000379 1969 0.757 - - - - - - - 0.757 - - integrin subunit beta 3 [Source:NCBI gene;Acc:374209]
73. HOOK3 ENSGALG00000015390 992 0.757 - - - - - - - 0.757 - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
74. RAB21 ENSGALG00000010183 7718 0.757 - - - - - - - 0.757 - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
75. SPINK4 ENSGALG00000043964 50 0.755 - - - - - - - 0.755 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
76. LRRC40 ENSGALG00000011301 3409 0.755 - - - - - - - 0.755 - - leucine rich repeat containing 40 [Source:NCBI gene;Acc:424713]
77. ENPP3 ENSGALG00000037587 25 0.755 - - - - - - - 0.755 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
78. ZFAND4 ENSGALG00000005893 1415 0.754 - - - - - - - 0.754 - - zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]
79. OSBPL8 ENSGALG00000010246 4565 0.753 - - - - - - - 0.753 - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
80. METAP1 ENSGALG00000012239 1125 0.751 - - - - - - - 0.751 - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
81. C1QTNF6 ENSGALG00000027067 493 0.749 - - - - - - - 0.749 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
82. ENSGALG00000021882 ENSGALG00000021882 63 0.748 - - - - - - - 0.748 - -
83. ARPC1B ENSGALG00000032588 2407 0.748 - - - - - - - 0.748 - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
84. OSBPL2 ENSGALG00000005195 94 0.746 - - - - - - - 0.746 - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
85. PLK2 ENSGALG00000014725 1736 0.746 - - - - - - - 0.746 - - polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]
86. LMOD1 ENSGALG00000028721 81 0.744 - - - - - - - 0.744 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
87. LEPREL2 LEPREL2 2046 0.743 - - - - - - - 0.743 - -
88. SMYD1 ENSGALG00000015935 75 0.742 - - - - - - - 0.742 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
89. INPP4A ENSGALG00000029709 48 0.741 - - - - - - - 0.741 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
90. RTN4RL2 ENSGALG00000032903 809 0.739 - - - - - - - 0.739 - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
91. SFXN4 ENSGALG00000009350 3899 0.739 - - - - - - - 0.739 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
92. IRK1 IRK1 563 0.738 - - - - - - - 0.738 - -
93. PER3 ENSGALG00000000573 590 0.738 - - - - - - - 0.738 - - period circadian clock 3 [Source:NCBI gene;Acc:419366]
94. PRNP ENSGALG00000000209 2159 0.737 - - - - - - - 0.737 - - prion protein [Source:NCBI gene;Acc:396452]
95. SNX29 ENSGALG00000039855 676 0.737 - - - - - - - 0.737 - - sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]
96. ARAP2 ENSGALG00000041373 233 0.736 - - - - - - 0.736 - - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
97. ABCB7 ENSGALG00000007788 170 0.734 - - - - - - - 0.734 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
98. CNTN1 ENSGALG00000009523 158 0.732 - - - - - - - 0.732 - - contactin 1 [Source:NCBI gene;Acc:417786]
99. METTL25 1538 0.732 - - - - - - - 0.732 - - methyltransferase like 25, transcript variant X1
100. PRSS35 ENSGALG00000015847 52 0.731 - - - - - - - 0.731 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA