Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMNDC1

Gene Name Gene ID Reads Annotation
SMNDC1 ENSGALG00000008561 14415 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]











Genes with expression patterns similar to SMNDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMNDC1 ENSGALG00000008561 14415 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
2. LUC7L2 ENSGALG00000036238 11817 1.892 - - - - 0.949 - - 0.943 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
3. ZEB1 ENSGALG00000007260 9277 1.852 - - - - 0.943 - - 0.909 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
4. VPS39 ENSGALG00000008991 4018 1.844 - - - - - - 0.957 0.887 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
5. MED1 ENSGALG00000001708 9556 1.835 - - - - 0.955 - - 0.880 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
6. MARCKSL1 ENSGALG00000032335 88728 1.82 - - - - 0.897 - 0.923 - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
7. RAB14 ENSGALG00000001474 12617 1.799 - - - - - - 0.957 0.842 - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
8. M6PR ENSGALG00000031681 9442 1.75 - - - - 0.950 - - - - 0.800 mannose-6-phosphate receptor, cation dependent, transcript variant X3
9. PSMD14 ENSGALG00000011128 13335 1.689 - - 0.742 - 0.947 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
10. RUNX1T1 ENSGALG00000033091 17529 1.686 - - - - 0.908 - - 0.778 - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
11. HEXA ENSGALG00000043828 4789 1.669 - - - - - - - 0.872 - 0.797 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
12. RAB21 ENSGALG00000010183 7718 1.658 - - 0.715 - 0.943 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
13. WDR92 ENSGALG00000008760 3934 1.637 - - 0.741 - - - - 0.896 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
14. ATP5C1 53961 1.629 - - - - 0.921 - - - - 0.708 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
15. SNX12 ENSGALG00000005659 9503 1.619 - - - - 0.816 - - - - 0.803 sorting nexin 12 [Source:NCBI gene;Acc:428704]
16. MIPEP ENSGALG00000017118 8666 1.613 - - - - - - - 0.833 - 0.780 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
17. COX5A ENSGALG00000014121 55281 1.581 - - - - 0.832 - - - - 0.749 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
18. CPT2 ENSGALG00000010681 3211 1.581 - - 0.773 - - - - - - 0.808 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
19. FZD6 ENSGALG00000030626 3336 1.581 - - - - - - - 0.880 - 0.701 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
20. BZW2 ENSGALG00000010809 29213 1.566 - - 0.832 - - - - - - 0.734 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
21. TXNDC12 ENSGALG00000010569 13822 1.565 - - - - - - - 0.758 - 0.807 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
22. WHSC1 1712 1.535 - - 0.715 - - - - - - 0.820 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
23. NRSN1 ENSGALG00000037811 11424 1.507 - - - - 0.734 - - - - 0.773 neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
24. KIF11 ENSGALG00000030597 5528 1.489 - - 0.737 - - - - - - 0.752 kinesin family member 11 [Source:NCBI gene;Acc:423809]
25. ETFDH ENSGALG00000009442 7671 1.464 - - 0.759 - - - - - - 0.705 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
26. ZNF639 ENSGALG00000005944 6387 1.462 - - 0.703 - 0.759 - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
27. MSX2 ENSGALG00000038848 6950 0.997 - - - - - - 0.997 - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
28. FAM98A ENSGALG00000010428 9585 0.959 - - - - 0.959 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
29. INCENP ENSGALG00000007537 16617 0.959 - - - - 0.959 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
30. SPG21 ENSGALG00000007262 8050 0.958 - - - - 0.958 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
31. RAE1 ENSGALG00000007653 8930 0.958 - - - - 0.958 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
32. C15H12ORF49 C15H12ORF49 13250 0.958 - - - - 0.958 - - - - -
33. CDC5L ENSGALG00000016704 22893 0.958 - - - - 0.958 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
34. RBM26 ENSGALG00000016910 13769 0.958 - - - - 0.958 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
35. MCM4 ENSGALG00000012915 13151 0.958 - - - - 0.958 - - - - - minichromosome maintenance complex component 4
36. EPFIP1L ENSGALG00000007683 18050 0.958 - - - - 0.958 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
37. CREPT CREPT 17142 0.958 - - - - 0.958 - - - - -
38. NEDD4L ENSGALG00000034584 5881 0.957 - - - - - - 0.957 - - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
39. CCDC59 ENSGALG00000028648 9272 0.957 - - - - 0.957 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
40. PSMD9 ENSGALG00000004352 7284 0.957 - - - - - - 0.957 - - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
41. IL17RD ENSGALG00000005499 5844 0.957 - - - - - - 0.957 - - - interleukin 17 receptor D [Source:NCBI gene;Acc:395186]
42. PASK ENSGALG00000006016 3096 0.957 - - - - - - 0.957 - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
43. ENSGALG00000003150 ENSGALG00000003150 10001 0.957 - - - - - - 0.957 - - -
44. WNT7B ENSGALG00000036255 3343 0.957 - - - - - - 0.957 - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
45. PTGR2 ENSGALG00000009269 4991 0.957 - - - - - - 0.957 - - - prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
46. ARHGEF28 ENSGALG00000014923 2523 0.957 - - - - - - 0.957 - - - Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]
47. POLDIP3 ENSGALG00000011863 6424 0.957 - - - - - - 0.957 - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
48. TTLL5 ENSGALG00000010340 4875 0.957 - - - - - - 0.957 - - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
49. SNX24 ENSGALG00000018874 4482 0.957 - - - - - - 0.957 - - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
50. ING3 ENSGALG00000009023 4961 0.957 - - - - - - 0.957 - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
51. RNF114 ENSGALG00000008021 6078 0.957 - - - - - - 0.957 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
52. CCNY ENSGALG00000007076 3921 0.957 - - - - - - 0.957 - - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
53. DGKD ENSGALG00000001730 4456 0.957 - - - - - - 0.957 - - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
54. TNPO3 ENSGALG00000039420 5178 0.956 - - - - 0.956 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
55. ERP29 ENSGALG00000023510 47100 0.956 - - - - - - 0.956 - - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
56. ISCA1 ENSGALG00000012606 10342 0.956 - - - - - - 0.956 - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
57. GNA13 ENSGALG00000036028 9791 0.956 - - - - - - 0.956 - - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
58. SEC61A2 ENSGALG00000036300 4235 0.956 - - - - 0.956 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
59. MMP2 ENSGALG00000003580 13120 0.956 - - - - - - 0.956 - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
60. SULF1 ENSGALG00000039553 5115 0.956 - - - - - - 0.956 - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
61. KIF4A ENSGALG00000004195 25487 0.956 - - - - - - 0.956 - - - kinesin family member 4A [Source:NCBI gene;Acc:395823]
62. NUP37 ENSGALG00000012759 9985 0.955 - - - - 0.955 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
63. HOXB3 ENSGALG00000043219 5198 0.955 - - - - 0.955 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
64. NT5DC2 ENSGALG00000035596 27633 0.955 - - - - - - 0.955 - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
65. NSG1 ENSGALG00000015010 5829 0.955 - - - - 0.955 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
66. UQCRC2 ENSGALG00000002490 23477 0.955 - - - - 0.955 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
67. EPB41L1 ENSGALG00000034171 3616 0.955 - - - - 0.955 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
68. VPS8 ENSGALG00000006704 5419 0.955 - - - - 0.955 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
69. AGPAT3 ENSGALG00000031932 6903 0.955 - - - - 0.955 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
70. OPTC ENSGALG00000003554 3698 0.954 - - - - 0.954 - - - - - opticin [Source:NCBI gene;Acc:395130]
71. TMEM39B ENSGALG00000003287 4125 0.954 - - - - 0.954 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
72. WHSC1L1 4065 0.954 - - - - 0.954 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
73. MRPL46 ENSGALG00000006782 5033 0.954 - - - - 0.954 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
74. PRRC1 ENSGALG00000014703 9962 0.954 - - - - - - 0.954 - - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
75. UBE2G2 ENSGALG00000005667 12689 0.953 - - - - 0.953 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
76. MRPL22 ENSGALG00000003919 2760 0.953 - - - - 0.953 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
77. USP1 ENSGALG00000010957 8297 0.953 - - - - 0.953 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
78. SEC63 ENSGALG00000015308 11596 0.953 - - - - 0.953 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
79. NDST2 ENSGALG00000005107 4224 0.953 - - - - 0.953 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
80. EIF3L ENSGALG00000012296 42627 0.953 - - - - 0.953 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
81. NUP93 ENSGALG00000003010 16504 0.953 - - - - - - 0.953 - - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
82. TBC1D7 ENSGALG00000012731 4891 0.953 - - - - 0.953 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
83. TM2D2 ENSGALG00000003356 7088 0.952 - - - - 0.952 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
84. RILPL2 ENSGALG00000003321 5632 0.952 - - - - 0.952 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
85. THBS1 ENSGALG00000009626 3521 0.952 - - - - 0.952 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
86. WDFY3 10775 0.952 - - - - - - 0.952 - - - WD repeat and FYVE domain containing 3, transcript variant X7
87. Sep-02_1 Sep-02_1 19203 0.951 - - - - - - 0.951 - - -
88. BCL9 ENSGALG00000037655 4620 0.951 - - - - 0.951 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
89. HMGB3 ENSGALG00000009071 12011 0.951 - - - - 0.951 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
90. NOL6 ENSGALG00000030730 7191 0.951 - - - - 0.951 - - - - - nucleolar protein 6
91. PRKACB ENSGALG00000028530 12506 0.951 - - - - - - 0.951 - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
92. IBA57 ENSGALG00000005328 4362 0.951 - - - - 0.951 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
93. MAP1B ENSGALG00000014999 6288 0.951 - - - - 0.951 - - - - - microtubule associated protein 1B
94. DNAJC2 ENSGALG00000008249 28064 0.951 - - - - 0.951 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
95. MYEOV2 MYEOV2 5155 0.951 - - - - 0.951 - - - - -
96. HTRA3 ENSGALG00000034673 512 0.95 - - - - 0.950 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
97. ABCC1 ENSGALG00000006646 2596 0.95 - - - - 0.950 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
98. gga-mir-6584 ENSGALG00000028834 1481 0.949 - - - - 0.949 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
99. ACTN1 ENSGALG00000042458 10477 0.949 - - - - - - - 0.949 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
100. MRPS11 ENSGALG00000006777 16009 0.949 - - - - 0.949 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]

There are 608 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA