Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMIM13

Gene Name Gene ID Reads Annotation
SMIM13 ENSDARG00000089204, ENSDARG00000113880 457 small integral membrane protein 13 [Source:ZFIN;Acc:ZDB-GENE-141212-279]










Genes with expression patterns similar to SMIM13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMIM13 ENSDARG00000089204, ENSDARG00000113880 457 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small integral membrane protein 13 [Source:ZFIN;Acc:ZDB-GENE-141212-279]
2. eif4a2 ENSDARG00000016477 665 2.262 - - - 0.713 - 0.773 0.776 - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]
3. iqcb1 ENSDARG00000101032 310 1.717 - - - 0.886 - 0.831 - - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
4. GPN1 ENSDARG00000043928 566 1.689 - - - 0.846 - - 0.843 - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
5. zdhhc17 ENSDARG00000070441 1073 1.626 - - - 0.883 - - 0.743 - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
6. dgcr14 1608 1.617 - - - 0.839 - - 0.778 - - DiGeorge syndrome critical region gene 14
7. far1 ENSDARG00000006899 204 1.603 - - - 0.867 - 0.736 - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
8. C12H10orf88 C12H10orf88 449 1.6 - - - 0.837 - 0.763 - - -
9. ANK1_1 ANK1_1 507 1.574 0.736 - - 0.838 - - - - -
10. lrrc40 ENSDARG00000017708 1156 1.573 - 0.753 - - - - 0.820 - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
11. eya4 ENSDARG00000012397, ENSDARG00000117039 887 1.572 0.851 - - - - 0.721 - - - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
12. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.563 - - - 0.802 - 0.761 - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
13. samd1a ENSDARG00000102810 1037 1.551 - - - 0.774 - - 0.777 - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
14. FBXL3 FBXL3 1769 1.551 - - - 0.814 - - 0.737 - -
15. GANAB_1 GANAB_1 685 1.545 - 0.764 - 0.781 - - - - -
16. lrrfip2 ENSDARG00000010400 2633 1.532 - - - 0.810 - - 0.722 - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
17. cwc27 ENSDARG00000043727 690 1.519 - - - 0.806 - - 0.713 - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
18. cnp_1 ENSDARG00000070822 249 1.519 - - - - - 0.799 0.720 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
19. SNCAIP ENSDARG00000100198 522 1.514 - - - 0.757 - - 0.757 - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
20. zmym4 ENSDARG00000035823 347 1.507 - - - 0.801 - - 0.706 - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
21. lppr3a lppr3a 1294 1.502 - 0.732 - 0.770 - - - - -
22. pop4 ENSDARG00000101472, ENSDARG00000112497 749 1.495 0.764 - - - - 0.731 - - - POP4 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050522-505]
23. als2b ENSDARG00000076924 738 1.493 - - - 0.758 - - 0.735 - - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
24. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.472 - - - - - 0.720 0.752 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
25. SLC41A2 SLC41A2 202 1.466 - - - - - 0.737 0.729 - -
26. uck2a ENSDARG00000006074 1554 1.463 0.722 - - - - 0.741 - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
27. RNASEH2C ENSDARG00000089637 1673 1.46 - - - 0.734 - - 0.726 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
28. RANBP2 ENSDARG00000093125 1854 1.46 - - - 0.744 - 0.716 - - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
29. waca ENSDARG00000012577 1794 1.458 - 0.723 - 0.735 - - - - - WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
30. MRPS17 ENSDARG00000054164 971 1.403 - 0.701 - - - 0.702 - - - mitochondrial ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-050522-390]
31. CHCHD4 CHCHD4 185 0.944 - - - 0.944 - - - - -
32. zgc:113364 ENSDARG00000037192 339 0.926 - - - 0.926 - - - - - zgc:113364 [Source:ZFIN;Acc:ZDB-GENE-050410-5]
33. COQ5 ENSDARG00000035618 556 0.916 - - - - - 0.916 - - - coenzyme Q5, methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040912-5]
34. pik3c3 ENSDARG00000054829 559 0.915 - - - 0.915 - - - - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
35. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.914 - - - - - 0.914 - - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
36. ythdf3 ENSDARG00000057939 475 0.909 - - - 0.909 - - - - - YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
37. polr3a ENSDARG00000102569 1072 0.904 - - - 0.904 - - - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
38. VPS37B_1 VPS37B_1 1816 0.896 - - - 0.896 - - - - -
39. GNAL ENSDARG00000045415 568 0.893 - - - 0.893 - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
40. irf2bp2b ENSDARG00000098635 1961 0.891 - - - 0.891 - - - - - interferon regulatory factor 2 binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2574]
41. arhgef7b ENSDARG00000073848 1249 0.889 - - - 0.889 - - - - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
42. eif2b4 ENSDARG00000014004 2213 0.885 - - - 0.885 - - - - - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
43. hif1an ENSDARG00000031915 2098 0.884 - - - 0.884 - - - - - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
44. CABZ01073424.1 ENSDARG00000107858 688 0.883 - - - 0.883 - - - - -
45. FAM114A2 ENSDARG00000079508 1226 0.882 - - - 0.882 - - - - - family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
46. cnot11 ENSDARG00000068596 829 0.882 - - - 0.882 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
47. CABZ01088061.1 CABZ01088061.1 695 0.881 - - - - - 0.881 - - -
48. si:ch211-282j22.3 ENSDARG00000010524 1007 0.88 - - - 0.880 - - - - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
49. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.876 - - - 0.876 - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
50. CT574587.1 ENSDARG00000097915 383 0.873 - - - 0.873 - - - - -
51. scube3 ENSDARG00000011490 227 0.872 - - - 0.872 - - - - - signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]
52. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 0.872 - - - 0.872 - - - - - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
53. ulk3 ENSDARG00000101661 69 0.872 - - - 0.872 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
54. SYNGAP1_1 SYNGAP1_1 66 0.872 - - - 0.872 - - - - -
55. ftr65 202 0.871 - - - 0.871 - - - - - finTRIM family, member 65
56. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.871 - - - 0.871 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
57. ctdspla ENSDARG00000071673 1447 0.87 - - - 0.870 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
58. HTRA4 ENSDARG00000005943 77 0.87 - - - 0.870 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
59. ZCCHC2 ENSDARG00000067950 204 0.87 - - - 0.870 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
60. nr4a2b ENSDARG00000044532 103 0.869 - - - 0.869 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
61. aanat2 ENSDARG00000079802 175 0.869 - - - 0.869 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
62. CABZ01029822.1 ENSDARG00000086931 1654 0.869 - - - 0.869 - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
63. trmt2b ENSDARG00000033967 127 0.869 - - - 0.869 - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
64. TP53BP2 TP53BP2 217 0.868 - - - 0.868 - - - - -
65. CU639413.2 CU639413.2 33 0.868 - - - 0.868 - - - - -
66. ADCY3 ADCY3 537 0.868 - - - 0.868 - - - - -
67. DTX3 DTX3 303 0.868 - - - 0.868 - - - - -
68. ppfia2 ENSDARG00000013000 45 0.868 - - - 0.868 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
69. zgc:165525 zgc:165525 207 0.868 - - - 0.868 - - - - -
70. ptk6b ENSDARG00000059956 44 0.868 - - - 0.868 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
71. slc3a1 ENSDARG00000017165 136 0.868 - - - 0.868 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
72. med19b ENSDARG00000009472 936 0.868 - - - 0.868 - - - - - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
73. tuba7l ENSDARG00000104643 33 0.868 - - - 0.868 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
74. si:dkey-176f19.6 si:dkey-176f19.6 373 0.867 - - - - - 0.867 - - -
75. gng2_1 ENSDARG00000056831 113 0.867 - - - 0.867 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
76. phf10 ENSDARG00000070084 1210 0.867 - - - 0.867 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
77. JMJD1C JMJD1C 289 0.867 - - - 0.867 - - - - -
78. SHISA9 SHISA9 154 0.867 - - - 0.867 - - - - -
79. zgc:165515 ENSDARG00000116300 182 0.867 - - - 0.867 - - - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
80. eef1a1a ENSDARG00000039502 234 0.867 - - - 0.867 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
81. orc3 ENSDARG00000008805 444 0.867 - - - 0.867 - - - - - origin recognition complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6247]
82. si:dkey-283b15.3 si:dkey-283b15.3 81 0.866 - - - 0.866 - - - - -
83. rxrba ENSDARG00000078954 85 0.866 - - - 0.866 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
84. wasb ENSDARG00000026350 139 0.866 - - - 0.866 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
85. TTC17 ENSDARG00000044812 124 0.866 - - - 0.866 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
86. pomcb ENSDARG00000069307 72 0.866 - - - 0.866 - - - - - proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
87. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.866 - - - 0.866 - - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
88. gnav1 ENSDARG00000043006 305 0.866 - - - 0.866 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
89. tmem104 ENSDARG00000088560 859 0.865 - - - 0.865 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
90. si:ch1073-127d16.1 ENSDARG00000087674 105 0.865 - - - 0.865 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
91. rs1 rs1 70 0.865 - - - 0.865 - - - - -
92. si:dkey-100n10.2 101 0.864 - - - 0.864 - - - - - si:dkey-100n10.2
93. cep76 ENSDARG00000058319 143 0.864 - - - 0.864 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
94. dpf2 ENSDARG00000012219 666 0.864 - - - 0.864 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
95. BX000999.4_1 BX000999.4_1 222 0.864 - - - 0.864 - - - - -
96. tpbga ENSDARG00000099609 1051 0.864 - - - 0.864 - - - - - trophoblast glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-030827-4]
97. mctp2a ENSDARG00000001414 307 0.864 - - - 0.864 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
98. rexo1 ENSDARG00000026986 770 0.864 - - - 0.864 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
99. rapgef5a ENSDARG00000075271 282 0.864 - - - 0.864 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
100. dcp1a ENSDARG00000100136 714 0.863 - - - 0.863 - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]

There are 948 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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