Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMEK1

Gene Name Gene ID Reads Annotation
SMEK1 SMEK1 95











Genes with expression patterns similar to SMEK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMEK1 SMEK1 95 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. BOK ENSGALG00000005772 117 1.887 - - - - - - - 0.913 - 0.974 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
3. ALDH6A1 ENSGALG00000010211 29 1.807 - - - - - - - 0.913 - 0.894 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
4. AKAP11 ENSGALG00000022739 82 1.792 - - - - - - - 0.823 - 0.969 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
5. CREB5 ENSGALG00000038265 92 1.655 - - - - - - - 0.734 - 0.921 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
6. SLC45A4 ENSGALG00000034971 142 1.593 - - 0.874 - - - - - - 0.719 solute carrier family 45 member 4 [Source:HGNC Symbol;Acc:HGNC:29196]
7. RNF215 ENSGALG00000040925 19 1.521 - - 0.705 - - - - - - 0.816 ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
8. ROGDI ENSGALG00000001841 313 0.983 - - - - - - - - - 0.983 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
9. C3orf58 ENSGALG00000002347 27 0.979 - - - - - - - - - 0.979 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
10. TRAK2 ENSGALG00000008370 46 0.979 - - - - - - - - - 0.979 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
11. TNFAIP3 ENSGALG00000013861 11 0.978 - - - - - - - - - 0.978 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
12. gga-mir-6544 ENSGALG00000027916 19 0.978 - - - - - - - - - 0.978 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
13. NMBR ENSGALG00000013813 15 0.975 - - - - - - - - - 0.975 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
14. TNFAIP2 ENSGALG00000011446 32 0.974 - - - - - - - - - 0.974 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
15. ING5 ENSGALG00000006317 149 0.97 - - - - - - - - - 0.970 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
16. TBX5 ENSGALG00000008253 820 0.969 - - - - - - - - - 0.969 T-box 5 [Source:NCBI gene;Acc:373988]
17. KAT6B ENSGALG00000005035 301 0.967 - - - - - - - - - 0.967 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
18. TNN ENSGALG00000004538 21 0.967 - - - - - - - - - 0.967 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
19. PKD2 ENSGALG00000010921 55 0.966 - - - - - - - - - 0.966 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
20. TRMT61A ENSGALG00000011522 14 0.965 - - - - - - - - - 0.965 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
21. SLC7A2 ENSGALG00000013627 58 0.964 - - - - - - - - - 0.964 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
22. CLIC3 ENSGALG00000038789 233 0.964 - - - - - - - - - 0.964 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
23. ZMYND10 ENSGALG00000035883 58 0.964 - - - - - - - - - 0.964 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
24. TM6SF1 ENSGALG00000006027 20 0.962 - - - - - - - - - 0.962 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
25. INADL INADL 51 0.96 - - - - - - - - - 0.960
26. TMEM200B ENSGALG00000024318 117 0.959 - - - - - - - - - 0.959 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
27. KIAA0895 ENSGALG00000036301 280 0.959 - - - - - - - - - 0.959 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
28. PHF11 ENSGALG00000019094 770 0.958 - - - - - - - - - 0.958 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
29. FAM154B FAM154B 175 0.958 - - - - - - - - - 0.958
30. ZNF385B ENSGALG00000009012 290 0.957 - - - - - - - - - 0.957 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
31. GSS ENSGALG00000003281 57 0.955 - - - - - - - - - 0.955 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
32. ERRFI1 ENSGALG00000000535 83 0.954 - - - - - - - - - 0.954 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
33. SENP7 ENSGALG00000044642 48 0.953 - - - - - - - - - 0.953 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
34. BMP2K ENSGALG00000010885 37 0.951 - - - - - - - - - 0.951 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
35. SLC20A1 ENSGALG00000013740 40 0.95 - - - - - - - - - 0.950 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
36. PPP1R1C ENSGALG00000008896 378 0.948 - - - - - - - 0.948 - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
37. PDE3A ENSGALG00000013143 28 0.943 - - - - - - - - - 0.943 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
38. TRAF-5 TRAF-5 102 0.943 - - - - - - - - - 0.943
39. BLOC1S2 ENSGALG00000005794 544 0.942 - - - - - - - - - 0.942 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
40. KCNB1 ENSGALG00000004758 620 0.942 - - - - - - - - - 0.942 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
41. NAALAD2 202 0.941 - - - - - - - - - 0.941 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
42. LMBR1 ENSGALG00000030379 29 0.939 - - - - - - - - - 0.939 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
43. SRR ENSGALG00000003155 93 0.938 - - - - - - - - - 0.938 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
44. PXK ENSGALG00000007052 121 0.937 - - - - - - - - - 0.937 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
45. ITM2B ENSGALG00000016996 1112 0.936 - - - - - - - - - 0.936 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
46. OSBPL2 ENSGALG00000005195 94 0.936 - - - - - - - - - 0.936 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
47. NAPG ENSGALG00000013932 67 0.933 - - - - - - - - - 0.933 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
48. HS1BP3 ENSGALG00000016486 380 0.932 - - - - - - - - - 0.932 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
49. SRRD ENSGALG00000005614 234 0.93 - - - - - - - - - 0.930 SRR1 domain containing [Source:NCBI gene;Acc:416908]
50. MYCN ENSGALG00000016462 1930 0.929 - - - - - - - - - 0.929 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
51. NR5A2 ENSGALG00000002182 392 0.929 - - - - - - - - - 0.929 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
52. MYH11 ENSGALG00000006520 166 0.929 - - - - - - - - - 0.929 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
53. KIF24 ENSGALG00000005806 124 0.926 - - - - - - - - - 0.926 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
54. ZEB2 ENSGALG00000040465 315 0.925 - - - - - - - - - 0.925 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
55. SLC30A9 ENSGALG00000031415 36 0.924 - - - - - - - - - 0.924 solute carrier family 30 member 9
56. SERAC1 ENSGALG00000013732 24 0.923 - - - - - - - - - 0.923 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
57. TGFBRAP1 ENSGALG00000016795 81 0.923 - - - - - - - - - 0.923 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
58. SBF2 ENSGALG00000005716 134 0.921 - - - - - - - 0.921 - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
59. MPP3 ENSGALG00000042521 1372 0.919 - - - - - - - - - 0.919 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
60. NME6 ENSGALG00000038044 1231 0.919 - - - - - - - - - 0.919 NME/NM23 nucleoside diphosphate kinase 6
61. KCNB2 ENSGALG00000031693 31 0.918 - - - - - - - - - 0.918 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
62. SMOC2 ENSGALG00000011205 340 0.918 - - - - - - - - - 0.918 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
63. NTRK1 ENSGALG00000019019 17 0.915 - - - - - - - 0.915 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
64. TMEM255A ENSGALG00000008604 7 0.915 - - - - - - - 0.915 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
65. RELN ENSGALG00000008193 43 0.915 - - - - - - - 0.915 - - reelin [Source:NCBI gene;Acc:427850]
66. WDR16 WDR16 22 0.915 - - - - - - - 0.915 - -
67. IL13RA1 ENSGALG00000044480 24 0.915 - - - - - - - 0.915 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
68. TRIM14 ENSGALG00000015315 22 0.915 - - - - - - - 0.915 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
69. ARSA ENSGALG00000035824 299 0.914 - - - - - - - 0.914 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
70. STARD13 ENSGALG00000017065 18 0.913 - - - - - - - 0.913 - - StAR related lipid transfer domain containing 13, transcript variant X3
71. PARP12 ENSGALG00000046187 10 0.913 - - - - - - - 0.913 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
72. TTLL2 ENSGALG00000011344 14 0.913 - - - - - - - 0.913 - - tubulin tyrosine ligase like 2, transcript variant X1
73. MEST ENSGALG00000008111 1 0.913 - - - - - - - 0.913 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
74. SMAP2 ENSGALG00000029244 498 0.913 - - - - - - - 0.913 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
75. AK8 ENSGALG00000040923 10 0.913 - - - - - - - 0.913 - - adenylate kinase 8, transcript variant X1
76. FGA ENSGALG00000009266 291 0.913 - - - - - - - 0.913 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
77. SNX25 ENSGALG00000010610 31 0.913 - - - - - - - 0.913 - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
78. RPS6KA6 ENSGALG00000007097 94 0.913 - - - - - - - 0.913 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
79. MCM9 ENSGALG00000014883 8 0.913 - - - - - - - 0.913 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
80. PALM ENSGALG00000026055 8 0.913 - - - - - - - 0.913 - - paralemmin [Source:NCBI gene;Acc:101750199]
81. FBXO16 7 0.913 - - - - - - - 0.913 - - F-box protein 16, transcript variant X1
82. TFRC 31 0.913 - - - - - - - 0.913 - - transferrin receptor, transcript variant X1
83. AK7 ENSGALG00000011093 9 0.913 - - - - - - - 0.913 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
84. SEC16A ENSGALG00000002364 19 0.913 - - - - - - - 0.913 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
85. COQ2 ENSGALG00000041294 25 0.912 - - - - - - - - - 0.912 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
86. TROJANZ ENSGALG00000027747 37 0.911 - - - - - - - 0.911 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
87. MRM1 ENSGALG00000039523 2009 0.911 - - - - - - - - - 0.911 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
88. PACSIN1 ENSGALG00000002802 6 0.911 - - - - - - - 0.911 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
89. TMEM116 ENSGALG00000004760 217 0.907 - - - - - - - - - 0.907 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
90. POF1B ENSGALG00000006919 7 0.905 - - 0.905 - - - - - - - POF1B, actin binding protein [Source:HGNC Symbol;Acc:HGNC:13711]
91. MYO1E ENSGALG00000004150 40 0.903 - - - - - - - 0.903 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
92. TRAIP ENSGALG00000002908 6901 0.903 - - - - - - - - - 0.903 TRAF interacting protein [Source:NCBI gene;Acc:415927]
93. ASB12 ENSGALG00000007594 185 0.901 - - - - - - - 0.901 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
94. ATF2 ENSGALG00000009287 73 0.896 - - - - - - - - - 0.896 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
95. LEO1 ENSGALG00000004696 111 0.893 - - - - - - - - - 0.893 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
96. ENDOV 121 0.888 - - - - - - - - - 0.888 endonuclease V
97. ZMIZ1 ENSGALG00000004850 114 0.888 - - - - - - - - - 0.888 zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]
98. DMXL1 ENSGALG00000002227 88 0.886 - - - - - - - - - 0.886 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
99. FAM192A ENSGALG00000021473 10213 0.885 - - - - - - - - - 0.885 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
100. RNF121 ENSGALG00000000868 452 0.882 - - - - - - - 0.882 - - ring finger protein 121 [Source:HGNC Symbol;Acc:HGNC:21070]

There are 242 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA