Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMCR8

Gene Name Gene ID Reads Annotation
SMCR8 ENSGALG00000024082 44 Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]











Genes with expression patterns similar to SMCR8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMCR8 ENSGALG00000024082 44 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
2. NUAK1 ENSGALG00000012662 411 1.74 - - - 0.837 0.903 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
3. OXGR1 ENSGALG00000016891 13 1.74 - - - 0.956 - - - 0.784 - - oxoglutarate receptor 1
4. LAPTM5 ENSGALG00000038636 18 1.715 - - - - 0.931 - - 0.784 - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
5. BEGAIN ENSGALG00000011236 35 1.689 - - - 0.955 - - - - - 0.734 brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
6. TNPO1 ENSGALG00000015014 57 1.682 - - - - 0.901 - - 0.781 - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
7. AGMO ENSGALG00000010792 76 1.59 - - - - 0.885 - 0.705 - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
8. SMAD7A SMAD7A 78 1.574 - - 0.750 - 0.824 - - - - -
9. RECQL5 ENSGALG00000002424 16 1.564 - - 0.780 - - - - 0.784 - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
10. ALS2CL ENSGALG00000005430 161 1.539 - - - 0.764 0.775 - - - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
11. HTR7_1 ENSGALG00000040549 86 1.505 - - - 0.782 - - 0.723 - - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
12. ZDHHC8 ENSGALG00000002124 35 0.97 - - - 0.970 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
13. HTR1E ENSGALG00000015826 11 0.968 - - - 0.968 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
14. ZPBP2 ENSGALG00000013484 14 0.968 - - - 0.968 - - - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
15. NUP160 ENSGALG00000043074 46 0.966 - - - 0.966 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
16. TNFAIP2 ENSGALG00000011446 32 0.966 - - - 0.966 - - - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
17. CP ENSGALG00000030773 119 0.966 - - - 0.966 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
18. MTERFD3 MTERFD3 20 0.963 - - - 0.963 - - - - - -
19. MMP23B ENSGALG00000001392 53 0.959 - - - - 0.959 - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
20. VEPH1 ENSGALG00000009682 51 0.959 - - - 0.959 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
21. TRAF2 ENSGALG00000042838 24 0.958 - - - 0.958 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
22. ACOX2 ENSGALG00000007132 47 0.956 - - - 0.956 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
23. ENSGALG00000015097 ENSGALG00000015097 93 0.951 - - - - 0.951 - - - - -
24. RGS16 ENSGALG00000033535 139 0.949 - - - 0.949 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
25. ENSGALG00000028652 ENSGALG00000028652 65 0.949 - - - 0.949 - - - - - -
26. ST8SIA1 ENSGALG00000013211 14 0.948 - - - - 0.948 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
27. CDH6 ENSGALG00000012917 17 0.948 - - - - 0.948 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
28. BTBD19 ENSGALG00000028978 20 0.948 - - - - 0.948 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
29. RFESD ENSGALG00000014673 198 0.942 - - - 0.942 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
30. gga-mir-454 ENSGALG00000033526 22 0.941 - - - 0.941 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
31. CLGN ENSGALG00000009826 54 0.938 - - - - 0.938 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
32. KITLG ENSGALG00000011206 71 0.938 - - - 0.938 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
33. OTUD7B ENSGALG00000013348 38 0.936 - - - 0.936 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
34. C9orf171 C9orf171 35 0.928 - - - - 0.928 - - - - -
35. CERKL ENSGALG00000008910 70 0.925 - - - - 0.925 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
36. ARHGEF5 ENSGALG00000017276 32 0.921 - - - 0.921 - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
37. CYP4A22 ENSGALG00000020688 741 0.919 - - - 0.919 - - - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
38. LHFP 167 0.918 - - - - 0.918 - - - - - lipoma HMGIC fusion partner
39. NMRK2 ENSGALG00000025751 57 0.914 - - - - 0.914 - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
40. SORCS3 ENSGALG00000008434 136 0.913 - - - - 0.913 - - - - - sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
41. MATN2 44 0.913 - - - 0.913 - - - - - - matrilin 2, transcript variant X9
42. EMP1 ENSGALG00000011803 351 0.912 - - - - 0.912 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
43. ELF5 ENSGALG00000035867 6 0.912 - - 0.912 - - - - - - - E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]
44. NLGN4 NLGN4 283 0.911 - - - 0.911 - - - - - -
45. MAML2 ENSGALG00000017199 13 0.91 - - 0.910 - - - - - - - mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]
46. ISM1 ENSGALG00000009042 196 0.908 - - - - 0.908 - - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
47. PLXNA4 ENSGALG00000006473 125 0.906 - - - - 0.906 - - - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
48. ALPI ENSGALG00000023866 19 0.903 - - - - 0.903 - - - - - alkaline phosphatase, intestinal, transcript variant X2
49. NOTCH1 ENSGALG00000002375 726 0.9 - - - 0.900 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
50. LCAT ENSGALG00000028928 484 0.898 - - - - 0.898 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
51. GRM1 ENSGALG00000012297 41 0.897 - - - - 0.897 - - - - - glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
52. DCLK1 ENSGALG00000041263 40 0.892 - - - - 0.892 - - - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
53. CHRNA7 ENSGALG00000004096 107 0.889 - - - - - - 0.889 - - - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
54. CLEC3B ENSGALG00000030969 363 0.887 - - - 0.887 - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
55. ENSGALG00000025733 ENSGALG00000025733 197 0.887 - - - 0.887 - - - - - -
56. TIGD3 TIGD3 36 0.883 - - - - 0.883 - - - - -
57. DLG2 56 0.883 - - - - - - 0.883 - - - discs large MAGUK scaffold protein 2, transcript variant X24
58. ENSGALG00000026584 ENSGALG00000026584 77 0.883 - - - - 0.883 - - - - -
59. OGDHL ENSGALG00000002266 57 0.882 - - - 0.882 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
60. LOC419390 ENSGALG00000001136 607 0.881 - - - - - - - 0.881 - - hairy and enhancer of split 5-like, transcript variant X1
61. PAK3 ENSGALG00000008058 234 0.881 - - - - - - - 0.881 - - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
62. ENSGALG00000024035 ENSGALG00000024035 544 0.88 - - - 0.880 - - - - - -
63. ATP9A ENSGALG00000007912 25 0.877 - - - - - - - 0.877 - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
64. ZNF143 ENSGALG00000005787 345 0.875 - - - 0.875 - - - - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
65. GOPC ENSGALG00000014902 352 0.875 - - - 0.875 - - - - - - golgi associated PDZ and coiled-coil motif containing, transcript variant X2
66. KCTD17 ENSGALG00000042419 90 0.874 - - - 0.874 - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
67. LRRK2 ENSGALG00000007161 66 0.872 - - - - 0.872 - - - - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
68. SMG7 ENSGALG00000004667 707 0.871 - - - 0.871 - - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
69. COG2 ENSGALG00000011114 522 0.871 - - - - 0.871 - - - - - component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
70. TMEM150C ENSGALG00000011175 218 0.87 - - - - 0.870 - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
71. TMEM177 ENSGALG00000011593 311 0.868 - - - 0.868 - - - - - - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
72. IWS1 ENSGALG00000001803 2305 0.867 - - - - 0.867 - - - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
73. PANK2 ENSGALG00000015978 753 0.866 - - - - 0.866 - - - - - pantothenate kinase 2 [Source:HGNC Symbol;Acc:HGNC:15894]
74. KCNG1 ENSGALG00000007980 26 0.866 - - - - 0.866 - - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
75. MOG ENSGALG00000022875 9 0.863 - - 0.863 - - - - - - - myelin oligodendrocyte glycoprotein, transcript variant X50
76. TRH ENSGALG00000008490 16 0.863 - - 0.863 - - - - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
77. TNR ENSGALG00000004526 6 0.863 - - 0.863 - - - - - - - tenascin R [Source:NCBI gene;Acc:396213]
78. ENSGALG00000002290 ENSGALG00000002290 6 0.863 - - 0.863 - - - - - - -
79. SLC7A4 ENSGALG00000002204 2 0.863 - - 0.863 - - - - - - - solute carrier family 7 member 4 [Source:HGNC Symbol;Acc:HGNC:11062]
80. TMEM69 ENSGALG00000010279 716 0.863 - - - 0.863 - - - - - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
81. SNORD97 SNORD97 4 0.863 - - 0.863 - - - - - - -
82. GUCY1B3 29 0.863 - - 0.863 - - - - - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
83. IGSF3 ENSGALG00000036738 1 0.863 - - 0.863 - - - - - - - immunoglobulin superfamily member 3, transcript variant X3
84. ENSGALG00000019711 ENSGALG00000019711 4 0.863 - - 0.863 - - - - - - -
85. RGS5 ENSGALG00000026572 2 0.863 - - 0.863 - - - - - - - regulator of G protein signaling 5 [Source:HGNC Symbol;Acc:HGNC:10001]
86. GEMIN8 ENSGALG00000016574 18 0.863 - - 0.863 - - - - - - - gem nuclear organelle associated protein 8 [Source:HGNC Symbol;Acc:HGNC:26044]
87. SLC6A9 ENSGALG00000010098 5 0.863 - - 0.863 - - - - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
88. PIK3CG ENSGALG00000008081 5 0.863 - - 0.863 - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
89. SNORA5 SNORA5 3 0.863 - - 0.863 - - - - - - -
90. FEM1C ENSGALG00000008204 9 0.863 - - 0.863 - - - - - - - fem-1 homolog C [Source:HGNC Symbol;Acc:HGNC:16933]
91. DNAJB13 ENSGALG00000017317 12 0.863 - - 0.863 - - - - - - - DnaJ heat shock protein family (Hsp40) member B13 [Source:HGNC Symbol;Acc:HGNC:30718]
92. SESN3 ENSGALG00000017204 7 0.863 - - 0.863 - - - - - - - sestrin 3, transcript variant X2
93. TXLNG ENSGALG00000016547 503 0.861 - - - 0.861 - - - - - - taxilin gamma [Source:HGNC Symbol;Acc:HGNC:18578]
94. STK38L ENSGALG00000014094 96 0.86 - - - - 0.860 - - - - - serine/threonine kinase 38 like [Source:NCBI gene;Acc:418217]
95. PGAP2 ENSGALG00000027762 2583 0.858 - - - 0.858 - - - - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
96. ADAMTSL2 ENSGALG00000002955 5 0.855 - - - - - - 0.855 - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
97. AHR2 ENSGALG00000023742 21 0.855 - - - - - - 0.855 - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
98. RGNL ENSGALG00000016722 3 0.855 - - - - - - 0.855 - - - regucalcin-like, transcript variant X4
99. ENSGALG00000013318 ENSGALG00000013318 8 0.855 - - - - - - 0.855 - - -
100. FGG ENSGALG00000009268 418 0.855 - - - - - - 0.855 - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]

There are 308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA