Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMCHD1

Gene Name Gene ID Reads Annotation
SMCHD1 ENSGALG00000014811 730 structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]











Genes with expression patterns similar to SMCHD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMCHD1 ENSGALG00000014811 730 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]
2. SLC9A9 ENSGALG00000002374 179 1.614 - - - - - 0.811 0.803 - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
3. PRKDC ENSGALG00000042469 449 0.904 - - - - - 0.904 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
4. MCC ENSGALG00000000208 61 0.893 - - - - - 0.893 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
5. POLB ENSGALG00000040828 7462 0.886 - - - - - 0.886 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
6. SMOC2 ENSGALG00000011205 340 0.883 - - - - - 0.883 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
7. SERPINB1 ENSGALG00000019555 29 0.881 - - - - - 0.881 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
8. HJURP ENSGALG00000015363 54 0.876 - - - - - 0.876 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
9. DBT ENSGALG00000005280 2893 0.873 - - - - - 0.873 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
10. GTF3C4 ENSGALG00000031016 1221 0.872 - - - - - 0.872 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
11. FAM175B 3194 0.872 - - - - - 0.872 - - - - family with sequence similarity 175 member B, transcript variant X2
12. RAC3 ENSGALG00000040606 355 0.87 - - - - - 0.870 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
13. NIPAL4 ENSGALG00000039687 29 0.87 - - - - - 0.870 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
14. KIF7 ENSGALG00000006611 33 0.869 - - - - - 0.869 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
15. GPD1L2 ENSGALG00000012061 31 0.869 - - - - - 0.869 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
16. ENSGALG00000002946 ENSGALG00000002946 56 0.868 - - - - - 0.868 - - - -
17. CARKD CARKD 2914 0.868 - - - - - 0.868 - - - -
18. SH2D1B ENSGALG00000028448 17 0.868 - - - - - 0.868 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
19. CADPS2 ENSGALG00000008926 398 0.868 - - - - - 0.868 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
20. OLFML1 ENSGALG00000027184 19 0.868 - - - - - 0.868 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
21. LOC419851 ENSGALG00000023953 80 0.866 - - - - - 0.866 - - - - complement component 4 binding protein, alpha chain
22. AQP1 ENSGALG00000005209 111 0.865 - - - - - 0.865 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
23. BLVRA ENSGALG00000031786 23 0.862 - - - - - 0.862 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
24. ACN9 ACN9 269 0.859 - - - - - 0.859 - - - -
25. DRD4 ENSGALG00000040761 79 0.857 - - - - - 0.857 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
26. C1orf168 C1orf168 98 0.856 - - - - - 0.856 - - - -
27. SCAF8 ENSGALG00000013635 421 0.852 - - - - - 0.852 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
28. CLASP1 ENSGALG00000011645 1378 0.851 - - - - - 0.851 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
29. GOLGA1 ENSGALG00000001025 334 0.849 - - - - - 0.849 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
30. SKA2 ENSGALG00000005090 24296 0.849 - - - - - 0.849 - - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
31. CRCP ENSGALG00000002587 8809 0.847 - - - - - 0.847 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
32. ADNP2 ENSGALG00000035669 318 0.845 - - - - - 0.845 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
33. LOC415478 ENSGALG00000021171 100 0.845 - - - - - 0.845 - - - - transmembrane protein 2-like, transcript variant X2
34. ELMSAN1 ENSGALG00000009282 79 0.845 - - - - - 0.845 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
35. GDE1 ENSGALG00000006916 1040 0.844 - - - - - 0.844 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
36. JAKMIP2 ENSGALG00000007593 95 0.843 - - - - - 0.843 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
37. ENSGALG00000004127 ENSGALG00000004127 566 0.843 - - - - - 0.843 - - - -
38. DIAPH3 ENSGALG00000016937 1069 0.843 - - - - - 0.843 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
39. ZNF236 ENSGALG00000013657 154 0.842 - - - - - 0.842 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
40. SERPINF2 ENSGALG00000002987 236 0.841 - - - - - 0.841 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
41. NAIF1 ENSGALG00000027734 1551 0.839 - - - - - 0.839 - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
42. ABCC3 ENSGALG00000007522 340 0.838 - - - - - 0.838 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
43. LTC4SL ENSGALG00000011450 645 0.835 - - - - - 0.835 - - - - leukotriene C4 synthase-like, transcript variant X3
44. PACSIN2 ENSGALG00000014159 601 0.834 - - - - - 0.834 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
45. ASAP2 ENSGALG00000016419 1393 0.833 - - - - - 0.833 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
46. TPCN3 ENSGALG00000008198 124 0.832 - - - - - 0.832 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
47. TTC7A ENSGALG00000010020 793 0.832 - - - - - 0.832 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
48. DSEL ENSGALG00000042505 92 0.832 - - - - - 0.832 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
49. NCAPD3 ENSGALG00000001491 221 0.831 - - - - - - 0.831 - - - non-SMC condensin II complex subunit D3, transcript variant X3
50. LRRC57 ENSGALG00000009112 1443 0.831 - - - - - 0.831 - - - - leucine rich repeat containing 57 [Source:NCBI gene;Acc:423236]
51. C19H17ORF85 C19H17ORF85 2538 0.83 - - - - - 0.830 - - - -
52. DNAJB5 ENSGALG00000001918 81 0.829 - - 0.829 - - - - - - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
53. VPRBP VPRBP 4037 0.829 - - - - - 0.829 - - - -
54. EIF2AK4 ENSGALG00000009611 2164 0.828 - - - - - 0.828 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
55. FGD4 ENSGALG00000012932 50 0.827 - - - - - 0.827 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
56. APLF ENSGALG00000008745 887 0.826 - - - - - 0.826 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
57. KCTD17 ENSGALG00000042419 90 0.824 - - - - - - - 0.824 - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
58. MXRA5 ENSGALG00000016635 352 0.823 - - - - - 0.823 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
59. SRBD1 ENSGALG00000009990 4568 0.822 - - - - - 0.822 - - - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
60. WHAMM ENSGALG00000006002 1678 0.822 - - - - - 0.822 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
61. PNPLA4 ENSGALG00000016618 142 0.822 - - - - - 0.822 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
62. COBL ENSGALG00000013102 84 0.821 - - - - - 0.821 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
63. SPSB3 ENSGALG00000002285 1329 0.82 - - - - - 0.820 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
64. KLHL40 ENSGALG00000005292 61 0.819 - - - - - 0.819 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
65. E4F1 ENSGALG00000005900 1814 0.818 - - - - - 0.818 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
66. VRK2 ENSGALG00000032770 117 0.817 - - - - - 0.817 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
67. TERF1 ENSGALG00000037453 4497 0.816 - - - - - 0.816 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
68. UTRN ENSGALG00000012256 9980 0.815 - - - - - 0.815 - - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
69. PDE5A ENSGALG00000011982 99 0.813 - - - - - - - 0.813 - - Gallus gallus phosphodiesterase 5A (PDE5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001319020]
70. DSL1 DSL1 113 0.809 - - - - - 0.809 - - - -
71. GMEB1 ENSGALG00000038488 158 0.808 - - - - - 0.808 - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
72. ENSGALG00000026461 ENSGALG00000026461 61 0.807 - - - - - 0.807 - - - -
73. FAM177A1 ENSGALG00000010046 4318 0.807 - - - - - 0.807 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
74. GYPC ENSGALG00000011566 99 0.807 - - - - - 0.807 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
75. PCSK5 ENSGALG00000033256 674 0.806 - - - - - 0.806 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
76. ASCC3 ENSGALG00000015465 259 0.806 - - - - - 0.806 - - - - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
77. PRKAR1A ENSGALG00000004237 4785 0.806 - - - - - 0.806 - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
78. PLEKHM2 ENSGALG00000003439 44 0.805 - - - - - - 0.805 - - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
79. PON2 ENSGALG00000009689 1416 0.804 - - - - - 0.804 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
80. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.804 - - - - - 0.804 - - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
81. CCDC80 ENSGALG00000015193 1387 0.801 - - - - 0.801 - - - - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
82. CDC14A ENSGALG00000005248 502 0.799 - - - - - 0.799 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
83. SNORD14 SNORD14 1032 0.799 - - - - - 0.799 - - - -
84. CCDC90B ENSGALG00000037072 5088 0.797 - - - - - 0.797 - - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
85. CEP290 ENSGALG00000011177 1559 0.797 - - - - - 0.797 - - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
86. CARD9 ENSGALG00000001889 83 0.797 - - - - - - 0.797 - - - caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
87. C9orf96 C9orf96 43 0.796 - - - - - 0.796 - - - -
88. LEMD3 ENSGALG00000009873 347 0.796 - - - - - 0.796 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
89. ATG10 ENSGALG00000027714 1100 0.795 - - - - - 0.795 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
90. gga-mir-7474 ENSGALG00000033766 5727 0.794 - - - - - 0.794 - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
91. WARS ENSGALG00000011228 193 0.794 - - - - - 0.794 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
92. EVC2 ENSGALG00000015029 51 0.793 - - - - - 0.793 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
93. C20ORF7 C20ORF7 2383 0.792 - - - - - 0.792 - - - -
94. ORMDL3 ENSGALG00000029142 165 0.791 - - - - - 0.791 - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:HGNC Symbol;Acc:HGNC:16038]
95. CREB1 ENSGALG00000008494 2219 0.788 - - - - - 0.788 - - - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
96. TEAD4 ENSGALG00000014342 6123 0.787 - - - - - 0.787 - - - - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
97. BRAT1 ENSGALG00000004348 158 0.785 - - - - - 0.785 - - - - BRCA1 associated ATM activator 1, transcript variant X3
98. ENSGALG00000014545 ENSGALG00000014545 285 0.785 - - - - - 0.785 - - - -
99. DENND2A ENSGALG00000012857 350 0.784 - - - - - - - - - 0.784 DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
100. COX7C ENSGALG00000027963 84312 0.783 - - - - - 0.783 - - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA