Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMCHD1

Gene Name Gene ID Reads Annotation
SMCHD1 ENSDARG00000104374 2 structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]










Genes with expression patterns similar to SMCHD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 3 1.000 - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. SNORA42 SNORA42 24 1.922 0.922 - - - 1.000 - - - -
4. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
5. SNORA62 SNORA62 39 1.844 1.000 - - - 0.844 - - - -
6. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
7. CACNA1H CACNA1H 34 1.678 0.923 - - - 0.755 - - - -
8. mapkap1 ENSDARG00000091777 8 1.574 0.752 - - - 0.822 - - - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
9. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
10. cdk4 ENSDARG00000087937 80 1 1.000 - - - - - - - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
11. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
12. SMU1 SMU1 3 1 - - 1.000 - - - - - -
13. AKNA_1 AKNA_1 2 1 - - 1.000 - - - - - -
14. AKAP13 ENSDARG00000079994 1 1 - - 1.000 - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
15. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
16. CABZ01024686.1 CABZ01024686.1 1 1 - - 1.000 - - - - - -
17. PBLD ENSDARG00000016704, ENSDARG00000111119, ENSDARG00000111431 30 1 1.000 - - - - - - - - phenazine biosynthesis like protein domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-217]
18. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - 1.000 - - - - - -
19. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
20. BX511182.1 BX511182.1 8 1 - - 1.000 - - - - - -
21. CU693378.1 CU693378.1 0 1 - - 1.000 - - - - - -
22. ODF2 ODF2 6 1 - - - - 1.000 - - - -
23. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
24. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
25. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
26. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
27. DXO ENSDARG00000036852 16 1 - - 1.000 - - - - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
28. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
29. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
30. zgc:165627 zgc:165627 4 1 1.000 - - - - - - - -
31. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
32. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
33. CT583679.2 CT583679.2 10 1 1.000 - - - - - - - -
34. socs1a ENSDARG00000038095 20 1 - - 1.000 - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
35. F13A1 F13A1 1 1 - - - - 1.000 - - - -
36. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
37. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
38. si:dkey-253d23.1 si:dkey-253d23.1 2 1 1.000 - - - - - - - -
39. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
40. ern2 ENSDARG00000058475 0 1 - - 1.000 - - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:ZFIN;Acc:ZDB-GENE-090312-15]
41. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
42. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
43. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
44. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
45. CU013533.1 CU013533.1 108 1 1.000 - - - - - - - -
46. SCAMP5 SCAMP5 19 1 - - 1.000 - - - - - -
47. si:ch211-113a14.26_1 5 1 - - 1.000 - - - - - - si:ch211-113a14.26
48. si:dkey-241l7.5 ENSDARG00000088989 6 1 1.000 - - - - - - - - si:dkey-241l7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-237]
49. CR790363.3 CR790363.3 5 1 - - 1.000 - - - - - -
50. si:ch211-11i5.3 si:ch211-11i5.3 7 1 - - 1.000 - - - - - -
51. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
52. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
53. kcnh8 ENSDARG00000062640 10 1 - - 1.000 - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
54. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
55. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
56. U1_51 U1_51 0 1 - - 1.000 - - - - - -
57. wibg wibg 2 1 - - - - 1.000 - - - -
58. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
59. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
60. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
61. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
62. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
63. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
64. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
65. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
66. guca1c ENSDARG00000030758 9 1 - - 1.000 - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
67. agbl5 ENSDARG00000045900 2 1 - - 1.000 - - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
68. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
69. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
70. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
71. si:busm1-180g5.7_1 si:busm1-180g5.7_1 0 1 - - 1.000 - - - - - -
72. cart1 ENSDARG00000070930 46 1 1.000 - - - - - - - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
73. si:ch211-152f22.2 si:ch211-152f22.2 0 1 - - 1.000 - - - - - -
74. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
75. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
76. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
77. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
78. crha ENSDARG00000093401 1 1 1.000 - - - - - - - - corticotropin releasing hormone a [Source:ZFIN;Acc:ZDB-GENE-070912-371]
79. viml ENSDARG00000044501 5 1 - - 1.000 - - - - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
80. thap7 ENSDARG00000070704 225 1 1.000 - - - - - - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
81. TOR4A TOR4A 70 1 1.000 - - - - - - - -
82. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
83. il2rgb ENSDARG00000053702 0 1 - - 1.000 - - - - - - interleukin 2 receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-080402-2]
84. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
85. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
86. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
87. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
88. RECK ENSDARG00000090039 15 1 - - 1.000 - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
89. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
90. SBK3_1 SBK3_1 21 1 1.000 - - - - - - - -
91. CU638737.1 CU638737.1 17 1 1.000 - - - - - - - -
92. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - 1.000 - - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
93. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
94. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
95. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
96. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
97. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
98. btk ENSDARG00000004433 106 1 1.000 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
99. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
100. tenc1a tenc1a 3 1 - - 1.000 - - - - - -

There are 578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA