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Results for SMCHD1

Gene Name Gene ID Reads Annotation
SMCHD1 ENSDARG00000104374 2 structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]










Genes with expression patterns similar to SMCHD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 3 1.000 - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. SNORA42 SNORA42 24 1.922 0.922 - - - 1.000 - - - -
4. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
5. SNORA62 SNORA62 39 1.844 1.000 - - - 0.844 - - - -
6. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
7. CACNA1H CACNA1H 34 1.678 0.923 - - - 0.755 - - - -
8. mapkap1 ENSDARG00000091777 8 1.574 0.752 - - - 0.822 - - - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
9. NMUR1 NMUR1 30 1 - - 1.000 - - - - - -
10. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
11. prf1.3 ENSDARG00000001572 1 1 1.000 - - - - - - - - perforin 1.3 [Source:ZFIN;Acc:ZDB-GENE-060503-461]
12. CMYA5 ENSDARG00000061379 65 1 - - 1.000 - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
13. si:dkey-269o24.7 si:dkey-269o24.7 28 1 1.000 - - - - - - - -
14. myo7bb ENSDARG00000077201 7 1 - - 1.000 - - - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
15. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
16. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
17. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
18. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
19. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
20. si:dkey-108f8.6 si:dkey-108f8.6 0 1 - - - - 1.000 - - - -
21. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
22. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
23. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - 1.000 - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
24. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
25. FBXO16 ENSDARG00000033949 10 1 - - 1.000 - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
26. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
27. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - 1.000 - - - - - -
28. Metazoa_SRP_14 Metazoa_SRP_14 0 1 - - 1.000 - - - - - -
29. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
30. slc18b1 ENSDARG00000044047 7 1 - - - - 1.000 - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
31. wdr27 ENSDARG00000053386 2 1 - - - - 1.000 - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
32. smchd1 ENSDARG00000104374 0 1 - - 1.000 - - - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
33. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - 1.000 - - - - - -
34. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
35. BIN1 BIN1 11 1 - - - - 1.000 - - - -
36. SCARNA1 SCARNA1 0 1 - - 1.000 - - - - - -
37. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - - 1.000 - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
38. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
39. ppp2r3a ENSDARG00000077722 7 1 - - 1.000 - - - - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
40. CR749741.2 CR749741.2 15 1 1.000 - - - - - - - -
41. sftpbb ENSDARG00000067566 13 1 - - - - 1.000 - - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
42. APEX2 ENSDARG00000008472 7 1 1.000 - - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
43. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
44. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
45. card9 ENSDARG00000067672 33 1 1.000 - - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
46. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
47. AKAP13 ENSDARG00000079994 1 1 - - 1.000 - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
48. GPBAR1 ENSDARG00000023302 2 1 1.000 - - - - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
49. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
50. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
51. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
52. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
53. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
54. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
55. si:ch211-281g2.3 si:ch211-281g2.3 1 1 - - 1.000 - - - - - -
56. TOR4A TOR4A 70 1 1.000 - - - - - - - -
57. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
58. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
59. ENSDARG00000029805 ENSDARG00000029805 4 1 1.000 - - - - - - - -
60. shpk ENSDARG00000002355 84 1 1.000 - - - - - - - - sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]
61. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
62. DIAPH2 ENSDARG00000076060 1 1 - - 1.000 - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
63. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
64. tgm2b ENSDARG00000074094 1 1 - - 1.000 - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
65. arid5a ENSDARG00000077120 26 1 1.000 - - - - - - - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
66. gzmk ENSDARG00000028780 1 1 - - 1.000 - - - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
67. PEG3_26 PEG3_26 0 1 - - 1.000 - - - - - -
68. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
69. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
70. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - - 1.000 - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
71. CLPX CLPX 2 1 - - 1.000 - - - - - -
72. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
73. si:dkey-202i12.5 si:dkey-202i12.5 20 1 1.000 - - - - - - - -
74. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
75. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
76. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
77. n6amt2 7 1 - - 1.000 - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
78. acoxl ENSDARG00000020149 14 1 - - 1.000 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
79. U8 U8 11 1 - - - - 1.000 - - - -
80. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
81. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - 1.000 - - - - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
82. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
83. MOB2 MOB2 4 1 - - - - 1.000 - - - -
84. PEG3_8 PEG3_8 1 1 - - 1.000 - - - - - -
85. ZBED1_5 ZBED1_5 1 1 - - 1.000 - - - - - -
86. rxrga ENSDARG00000005593 342 1 1.000 - - - - - - - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
87. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
88. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
89. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
90. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
91. wibg wibg 2 1 - - - - 1.000 - - - -
92. PEG3_28 PEG3_28 0 1 - - 1.000 - - - - - -
93. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
94. ifnphi3 ENSDARG00000070676 7 1 - - 1.000 - - - - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
95. si:dkey-30j10.5 ENSDARG00000093186 13 1 1.000 - - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
96. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 1.000 - - - - - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
97. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
98. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
99. si:ch211-131e11.20 si:ch211-131e11.20 0 1 - - 1.000 - - - - - -
100. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]

There are 578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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