Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMCHD1

Gene Name Gene ID Reads Annotation
SMCHD1 ENSDARG00000104374 2 structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]










Genes with expression patterns similar to SMCHD1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMCHD1 ENSDARG00000104374 2 3 1.000 - 1.000 - 1.000 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050211-6]
2. 5S_rRNA_5 5S_rRNA_5 1 2 - - 1.000 - 1.000 - - - -
3. SNORA42 SNORA42 24 1.922 0.922 - - - 1.000 - - - -
4. si:dkey-151m22.9 si:dkey-151m22.9 6 1.877 - - 1.000 - 0.877 - - - -
5. SNORA62 SNORA62 39 1.844 1.000 - - - 0.844 - - - -
6. si:ch211-214p13.9 ENSDARG00000091411 2 1.755 - - 1.000 - 0.755 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
7. CACNA1H CACNA1H 34 1.678 0.923 - - - 0.755 - - - -
8. mapkap1 ENSDARG00000091777 8 1.574 0.752 - - - 0.822 - - - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
9. sema6e ENSDARG00000000189 35 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
10. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
11. TMEM241 ENSDARG00000090685 11 1 - - 1.000 - - - - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
12. or137-1 ENSDARG00000105789 2 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
13. si:ch211-100p3.1 si:ch211-100p3.1 1 1 - - 1.000 - - - - - -
14. phox2bb ENSDARG00000091029 2 1 - - 1.000 - - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
15. ODF2 ODF2 6 1 - - - - 1.000 - - - -
16. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
17. card9 ENSDARG00000067672 33 1 1.000 - - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
18. btk ENSDARG00000004433 106 1 1.000 - - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
19. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - - 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
20. BX663613.3 ENSDARG00000117521 1 1 - - - - 1.000 - - - -
21. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
22. CU638737.1 CU638737.1 17 1 1.000 - - - - - - - -
23. FP236851.1 FP236851.1 10 1 1.000 - - - - - - - -
24. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - 1.000 - - - - - -
25. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
26. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
27. CABZ01048021.1 CABZ01048021.1 15 1 1.000 - - - - - - - -
28. nsmfb ENSDARG00000101234 4 1 - - - - 1.000 - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
29. PEG3_28 PEG3_28 0 1 - - 1.000 - - - - - -
30. si:dkey-240n22.3 ENSDARG00000095013 0 1 - - - - 1.000 - - - - si:dkey-240n22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-409]
31. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
32. pias4b ENSDARG00000042215 12 1 1.000 - - - - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
33. prkacbb_1 ENSDARG00000059125 83 1 1.000 - - - - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
34. BX005082.1 ENSDARG00000098558 2 1 - - 1.000 - - - - - -
35. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
36. CABZ01078849.1 CABZ01078849.1 0 1 - - 1.000 - - - - - -
37. SFT2D2_1 SFT2D2_1 219 1 1.000 - - - - - - - -
38. si:dkey-256e7.8 ENSDARG00000092022 4 1 1.000 - - - - - - - - si:dkey-256e7.8 [Source:ZFIN;Acc:ZDB-GENE-090313-283]
39. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - 1.000 - - - - - -
40. si:dkey-153k10.6 10 1 - - 1.000 - - - - - - si:dkey-153k10.6, transcript variant X1
41. AL929092.1_1 ENSDARG00000092217 3 1 - - 1.000 - - - - - -
42. si:ch211-155o21.4 ENSDARG00000096567 25 1 1.000 - - - - - - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
43. LRRC3C LRRC3C 0 1 - - 1.000 - - - - - -
44. si:ch211-227p7.5 ENSDARG00000099046 1 1 1.000 - - - - - - - - si:ch211-227p7.5 [Source:ZFIN;Acc:ZDB-GENE-120703-10]
45. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
46. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - 1.000 - - - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
47. si:dkey-26g8.12 si:dkey-26g8.12 3 1 - - - - 1.000 - - - -
48. CT583625.1 ENSDARG00000093788 10 1 - - - - 1.000 - - - -
49. si:dkey-56m15.8 ENSDARG00000098426 2 1 1.000 - - - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
50. MPZL2 MPZL2 31 1 1.000 - - - - - - - -
51. U8 U8 11 1 - - - - 1.000 - - - -
52. U1_15 U1_15 1 1 - - - - 1.000 - - - -
53. CLPX CLPX 2 1 - - 1.000 - - - - - -
54. per1a ENSDARG00000056885 0 1 - - 1.000 - - - - - - period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1]
55. si:ch211-223f7.1 si:ch211-223f7.1 38 1 1.000 - - - - - - - -
56. si:ch73-290k24.5 ENSDARG00000076310 39 1 1.000 - - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
57. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
58. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
59. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 1.000 - - - - - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
60. trim35-38 trim35-38 3 1 - - - - 1.000 - - - -
61. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
62. si:dkey-100h21.2 si:dkey-100h21.2 30 1 1.000 - - - - - - - -
63. si:ch73-383o19.2 si:ch73-383o19.2 3 1 - - 1.000 - - - - - -
64. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 1.000 - - - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
65. srd5a2a ENSDARG00000043587 21 1 - - 1.000 - - - - - - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
66. cmpk2 ENSDARG00000031359 1 1 - - - - 1.000 - - - - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
67. CABZ01030262.1 CABZ01030262.1 11 1 - - - - 1.000 - - - -
68. si:dkey-54i3.2 si:dkey-54i3.2 1 1 1.000 - - - - - - - -
69. si:dkey-96n2.2 si:dkey-96n2.2 0 1 - - - - 1.000 - - - -
70. SNORA62_1 SNORA62_1 1 1 - - 1.000 - - - - - -
71. MCC ENSDARG00000105237 4 1 - - 1.000 - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
72. prpf4_1 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 3 1 1.000 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
73. BX119910.10 BX119910.10 0 1 - - 1.000 - - - - - -
74. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
75. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
76. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - 1.000 - - - - - -
77. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
78. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
79. BX465848.1 ENSDARG00000114947 1 1 - - - - 1.000 - - - -
80. aldoca ENSDARG00000057661, ENSDARG00000111344 1 1 - - - - 1.000 - - - - aldolase C, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-050706-128]
81. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
82. POLR2E POLR2E 1 1 - - 1.000 - - - - - -
83. adamts18 ENSDARG00000001999 5 1 - - 1.000 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:ZFIN;Acc:ZDB-GENE-070815-1]
84. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 - - - - 1.000 - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
85. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1 - - 1.000 - - - - - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
86. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
87. gata4 ENSDARG00000098952 11 1 - - 1.000 - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
88. UBE2O 1 1 - - 1.000 - - - - - - ubiquitin-conjugating enzyme E2O
89. MOB2 MOB2 4 1 - - - - 1.000 - - - -
90. CU469509.2 CU469509.2 4 1 - - - - 1.000 - - - -
91. wibg wibg 2 1 - - - - 1.000 - - - -
92. NXPH4 11 1 1.000 - - - - - - - - neurexophilin 4
93. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
94. CR388163.4 CR388163.4 4 1 - - 1.000 - - - - - -
95. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
96. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - 1.000 - - - - - -
97. SNORD12 SNORD12 1 1 - - 1.000 - - - - - -
98. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
99. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
100. si:dkey-284p5.3 ENSDARG00000095638 4 1 1.000 - - - - - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]

There are 578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA