Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMC6

Gene Name Gene ID Reads Annotation
SMC6 ENSGALG00000016467 3321 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]











Genes with expression patterns similar to SMC6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMC6 ENSGALG00000016467 3321 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
2. CKAP2 ENSGALG00000017025 25020 2.777 - - - - 0.894 - - 0.917 - 0.966 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
3. PROM1 ENSGALG00000014496 2494 2.44 - - 0.731 - - - 0.741 - - 0.968 prominin 1 [Source:NCBI gene;Acc:422825]
4. DNAJA1 ENSGALG00000023066 3820 1.958 - - - - 0.991 - - 0.967 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
5. ITGA9 ENSGALG00000029378 415 1.932 - - - - - - - 0.962 - 0.970 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
6. MPRIP ENSGALG00000004798 6700 1.931 - - - - 0.964 - - - - 0.967 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
7. LOC770492 ENSGALG00000027778 695 1.923 - - - - 0.994 - - - - 0.929 ras-related and estrogen-regulated growth inhibitor-like
8. FZD6 ENSGALG00000030626 3336 1.918 - - - - 0.994 - - - - 0.924 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
9. CRCP ENSGALG00000002587 8809 1.915 - - - - 0.987 - - - - 0.928 CGRP receptor component [Source:NCBI gene;Acc:396022]
10. TXNDC11 ENSGALG00000003154 2224 1.914 - - - - 0.977 - - - - 0.937 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
11. DAP3 ENSGALG00000019796 13278 1.911 - - - - 0.990 - - - - 0.921 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
12. SMARCC1 ENSGALG00000032642 4842 1.905 - - - - - - - 0.966 - 0.939 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
13. POLR1B ENSGALG00000032273 3845 1.898 - - - - 0.978 - - - - 0.920 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
14. COG6 ENSGALG00000017035 2777 1.885 - - - - 0.983 - - - - 0.902 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
15. MTERFD1 MTERFD1 3640 1.884 - - - - - - - 0.958 - 0.926
16. TXNDC5 ENSGALG00000012784 4678 1.88 - - - - - - - 0.938 - 0.942 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
17. ZFR ENSGALG00000003235 8466 1.869 - - - - 0.909 - - - - 0.960 zinc finger RNA binding protein, transcript variant X3
18. KHDRBS1 ENSGALG00000003272 4249 1.867 - - - - - - - 0.961 - 0.906 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
19. NDUFA4 ENSGALG00000025999 53323 1.855 - - - - 0.953 - - - - 0.902 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
20. PWP1 ENSGALG00000012631 10536 1.838 - - - - 0.967 - - - - 0.871 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
21. TMX4 ENSGALG00000028587 3513 1.837 - - - - 0.982 - - - - 0.855 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
22. PEX2 ENSGALG00000035752 4427 1.832 - - - - 0.976 - - - - 0.856 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
23. ZNF318 ENSGALG00000034040 1758 1.83 - - - - 0.994 - - - - 0.836 zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
24. RUVBL1 ENSGALG00000005931 9379 1.81 - - - - 0.935 - - 0.875 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
25. CAMSAP2 ENSGALG00000002145 6109 1.808 - - - - - - - 0.951 - 0.857 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
26. C1H21ORF33 ENSGALG00000019171 8910 1.794 - - - - 0.959 - - - - 0.835 chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
27. ASB9 ENSGALG00000016563 2780 1.793 - - - - - - - 0.853 - 0.940 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
28. MED24 ENSGALG00000013506 5403 1.78 - - - - - - - 0.894 - 0.886 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
29. SERINC1 ENSGALG00000014868 12484 1.732 - - - - 0.896 - - - - 0.836 serine incorporator 1 [Source:NCBI gene;Acc:421722]
30. STX2 ENSGALG00000002536 10438 1.728 - - - - 0.777 - - - - 0.951 syntaxin 2 [Source:NCBI gene;Acc:378895]
31. NCBP1 ENSGALG00000002087 8907 1.723 - - - - 0.913 - - - - 0.810 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
32. ROMO1 ENSGALG00000027416 9560 1.723 - - - - 0.965 - - - - 0.758 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
33. CCNK ENSGALG00000011138 6416 1.723 - - - - 0.945 - - - - 0.778 cyclin K [Source:NCBI gene;Acc:423446]
34. UBE2E3 ENSGALG00000020793 9517 1.719 - - - - 0.934 - - - - 0.785 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
35. BTG1L ENSGALG00000004676 2293 1.718 - - - - - - - 0.971 - 0.747 protein BTG1-like
36. PLA2G15 ENSGALG00000041787 762 1.715 - - 0.749 - - - - - - 0.966 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
37. gga-mir-1306 ENSGALG00000025271 1231 1.693 - - 0.742 - - - - 0.951 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
38. AIMP1 ENSGALG00000010553 17994 1.687 - - - - 0.933 - - - - 0.754 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
39. PRPS1 ENSGALG00000004908 27994 1.686 - - - - 0.920 - - - - 0.766 phosphoribosyl pyrophosphate synthetase 1
40. TCEA2 ENSGALG00000005976 9143 1.684 - - - - 0.960 - - - - 0.724 transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
41. TBL1XR1 ENSGALG00000039182 16983 1.678 - - - - - - - 0.929 - 0.749 transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
42. RTN4R ENSGALG00000007732 1515 1.672 - - - - - - 0.700 - - 0.972 reticulon 4 receptor
43. NDUFAF1 ENSGALG00000008587 14779 1.669 - - - - - - - 0.910 - 0.759 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
44. SPG21 ENSGALG00000007262 8050 1.641 - - - - - - - 0.805 - 0.836 SPG21, maspardin [Source:NCBI gene;Acc:415526]
45. SMDT1 ENSGALG00000011897 9360 1.637 - - - - - - - 0.893 - 0.744 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
46. ZNF326 ENSGALG00000006113 15141 1.617 - - - - - - - 0.828 - 0.789 zinc finger protein 326 [Source:NCBI gene;Acc:424512]
47. SUB1 ENSGALG00000003248 56412 1.615 - - - - 0.829 - - - - 0.786 SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
48. EFTUD2 ENSGALG00000000988 17913 1.613 - - - - - - - 0.851 - 0.762 elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
49. CCNB2 ENSGALG00000004161 50324 1.565 - - - - 0.844 - - - - 0.721 cyclin B2 [Source:NCBI gene;Acc:415400]
50. HNRNPD ENSGALG00000011184 10686 1.565 - - - - - - - 0.774 - 0.791 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
51. PPA2 ENSGALG00000010582 22301 1.557 - - - - 0.702 - - - - 0.855 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
52. CTSC ENSGALG00000017239 7651 1.553 - - 0.736 - - - - 0.817 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
53. RALGAPB ENSGALG00000001420 5112 1.522 - - - - - - - 0.765 - 0.757 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
54. WDR75 ENSGALG00000045237 9484 1.478 - - - - - - - 0.775 - 0.703 WD repeat domain 75
55. Sep-11 Sep-11 2005 0.995 - - - - 0.995 - - - - -
56. DRD2 ENSGALG00000007794 399 0.994 - - - - 0.994 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
57. RAB23 ENSGALG00000016279 597 0.994 - - - - 0.994 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
58. FANCM ENSGALG00000031182 1030 0.994 - - - - 0.994 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
59. ERICH1 ENSGALG00000031021 1495 0.994 - - - - 0.994 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
60. ADPGK ENSGALG00000001788 208 0.993 - - - - 0.993 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
61. IL4RA IL4RA 1237 0.993 - - - - 0.993 - - - - -
62. AP1S3 ENSGALG00000005171 2981 0.992 - - - - 0.992 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
63. KLF3 ENSGALG00000041717 2787 0.992 - - - - 0.992 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
64. TEL TEL 1231 0.992 - - - - 0.992 - - - - -
65. TCERG1L ENSGALG00000010470 490 0.992 - - - - 0.992 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
66. CGT CGT 948 0.991 - - - - 0.991 - - - - -
67. ZBTB8OS ENSGALG00000003517 2436 0.991 - - - - 0.991 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
68. OGFOD3 ENSGALG00000001618 2438 0.991 - - - - 0.991 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
69. CALCA CALCA 682 0.991 - - - - 0.991 - - - - -
70. NQO2 ENSGALG00000025747 2287 0.99 - - - - 0.990 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
71. COQ3 ENSGALG00000015486 3508 0.99 - - - - 0.990 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
72. ALDH18A1 ENSGALG00000034655 3038 0.99 - - - - 0.990 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
73. VCPKMT ENSGALG00000012269 2107 0.99 - - - - 0.990 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
74. TMEM203 ENSGALG00000008925 3033 0.99 - - - - 0.990 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
75. REXO5 ENSGALG00000002239 2466 0.99 - - - - 0.990 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
76. PRKCD ENSGALG00000002016 1476 0.99 - - - - 0.990 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
77. IFT172 ENSGALG00000016509 1226 0.99 - - - - 0.990 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
78. BBS2 ENSGALG00000042415 1816 0.989 - - - - 0.989 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
79. ARPP21 ENSGALG00000043240 2403 0.989 - - - - 0.989 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
80. ITPA ENSGALG00000003250 7722 0.989 - - - - 0.989 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
81. RASA2 ENSGALG00000002850 2231 0.988 - - - - 0.988 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
82. RNF207 2949 0.987 - - - - 0.987 - - - - - ring finger protein 207, transcript variant X1
83. ROCK1 ENSGALG00000014922 4020 0.987 - - - - 0.987 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
84. TMEM97 ENSGALG00000005702 2037 0.986 - - - - 0.986 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
85. DLGAP5 ENSGALG00000012165 2406 0.986 - - - - 0.986 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
86. METTL25 1538 0.985 - - - - 0.985 - - - - - methyltransferase like 25, transcript variant X1
87. MICALL1 ENSGALG00000012265 3753 0.983 - - - - 0.983 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
88. SLC25A15 ENSGALG00000017032 6773 0.983 - - - - 0.983 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
89. ATP5J 14451 0.982 - - - - 0.982 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
90. TMEM184C ENSGALG00000010019 7856 0.982 - - - - 0.982 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
91. PDHB ENSGALG00000029576 12254 0.981 - - - - 0.981 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
92. RPAP3 ENSGALG00000009743 3380 0.981 - - - - 0.981 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
93. PLS3 ENSGALG00000005930 12625 0.98 - - - - 0.980 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
94. ATAD5 ENSGALG00000003294 4830 0.979 - - - - 0.979 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
95. GLI2 ENSGALG00000011630 3347 0.979 - - - - 0.979 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
96. MDFIC ENSGALG00000026838 3881 0.979 - - - - 0.979 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
97. MYBBP1A ENSGALG00000001363 10331 0.979 - - - - 0.979 - - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
98. DHX33 ENSGALG00000001630 7783 0.978 - - - - 0.978 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
99. KIAA1524 ENSGALG00000015360 3527 0.978 - - - - 0.978 - - - - - KIAA1524 [Source:NCBI gene;Acc:418410]
100. MSI1 ENSGALG00000007227 2279 0.977 - - - - - - - - - 0.977 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]

There are 808 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA