Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMC5

Gene Name Gene ID Reads Annotation
SMC5 ENSGALG00000015118 1799 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]











Genes with expression patterns similar to SMC5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMC5 ENSGALG00000015118 1799 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
2. CNTRL ENSGALG00000001513 1773 2.508 - - 0.903 0.752 - - - - - 0.853 centriolin [Source:NCBI gene;Acc:417121]
3. DBN1 ENSGALG00000033405 216 1.724 - - 0.866 0.858 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
4. SLK ENSGALG00000008318 2220 1.721 - - 0.870 - - - - - - 0.851 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
5. WHSC1 1712 1.707 - - 0.867 - - - - - - 0.840 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
6. HYAL3 ENSGALG00000029000 712 1.693 - - 0.827 - - - - - - 0.866 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
7. SMC4 ENSGALG00000009553 15715 1.683 - - 0.800 - - - - - - 0.883 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
8. ITGA9 ENSGALG00000029378 415 1.683 - - - 0.839 - - - - - 0.844 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
9. PRPF38B ENSGALG00000001972 2009 1.677 - - 0.842 - - - - - - 0.835 pre-mRNA processing factor 38B
10. HINT3 ENSGALG00000044342 5674 1.675 - - 0.809 0.866 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
11. INTS10 ENSGALG00000010130 6320 1.655 - - - 0.816 - - - - - 0.839 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
12. BAG5 ENSGALG00000031062 4498 1.652 - - 0.810 0.842 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
13. GTF2F2 ENSGALG00000016974 7524 1.652 - - - 0.789 - - - - - 0.863 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
14. PGD ENSGALG00000002797 15115 1.64 - - - 0.794 - - - - - 0.846 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
15. MYCBP2 ENSGALG00000016915 2374 1.639 - - 0.808 - - - - - - 0.831 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
16. BTG1L ENSGALG00000004676 2293 1.633 - - 0.828 0.805 - - - - - - protein BTG1-like
17. QSER1 ENSGALG00000012030 4490 1.63 - - 0.753 - - - - - - 0.877 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
18. PPFIA1 ENSGALG00000035774 5258 1.63 - - - 0.764 - - - - - 0.866 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
19. FTD FTD 3041 1.628 - - 0.790 0.838 - - - - - -
20. ASB9 ENSGALG00000016563 2780 1.627 - - - 0.762 - - - - - 0.865 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
21. ZC3H11A ENSGALG00000000541 2712 1.623 - - 0.836 - - - - - - 0.787 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
22. SESN1 ENSGALG00000015286 2387 1.612 - - 0.802 0.810 - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
23. SELK SELK 15022 1.611 - - 0.830 0.781 - - - - - -
24. CCNA2 ENSGALG00000011881 2574 1.611 - - 0.788 - - - - - - 0.823 cyclin A2 [Source:NCBI gene;Acc:396172]
25. SPDL1 ENSGALG00000001942 4403 1.607 - - 0.756 - - - - - - 0.851 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
26. HPS5 ENSGALG00000027716 2466 1.607 - - 0.794 0.813 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
27. COG7 ENSGALG00000006156 4072 1.607 - - 0.835 0.772 - - - - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
28. CAMSAP1 ENSGALG00000001692 2617 1.607 - - 0.860 - - - - - - 0.747 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
29. SP3 ENSGALG00000031796 8997 1.601 - - 0.807 - - - - - - 0.794 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
30. TIAR TIAR 2471 1.597 - - 0.862 - - - - - - 0.735
31. SLC39A6 ENSGALG00000013209 1754 1.595 - - 0.787 - - - - - - 0.808 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
32. HDAC2 ENSGALG00000014991 23458 1.594 - - 0.759 - - - - - - 0.835 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
33. ATG16L1 ENSGALG00000001619 3562 1.59 - - - 0.753 - - - - - 0.837 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
34. CKAP2 ENSGALG00000017025 25020 1.588 - - 0.711 - - - - - - 0.877 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
35. MRPL50 ENSGALG00000015543 11649 1.585 - - - - - - - 0.737 - 0.848 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
36. SSR2 ENSGALG00000000764 32190 1.584 - - - 0.730 - - - - - 0.854 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
37. PANK1 ENSGALG00000006431 2910 1.578 - - 0.777 0.801 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
38. POGZ ENSGALG00000036365 4056 1.574 - - 0.804 0.770 - - - - - - pogo transposable element with ZNF domain, transcript variant X2
39. PSMD14 ENSGALG00000011128 13335 1.574 - - 0.808 0.766 - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
40. RAD50 ENSGALG00000006794 4308 1.565 - - 0.731 - - - - - - 0.834 RAD50 double strand break repair protein, transcript variant X4
41. FECH ENSGALG00000038461 3491 1.565 - - 0.826 - - - - - - 0.739 ferrochelatase [Source:NCBI gene;Acc:374020]
42. PRDM4 ENSGALG00000012619 876 1.564 - - - 0.864 - - - - - 0.700 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
43. OVCA2 ENSGALG00000045371 2862 1.562 - - 0.746 0.816 - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
44. C18orf8 C18orf8 1512 1.56 - - 0.834 0.726 - - - - - -
45. WBP4 ENSGALG00000016949 5858 1.559 - - 0.797 - - - - - - 0.762 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
46. CPT2 ENSGALG00000010681 3211 1.558 - - 0.732 - - - - - - 0.826 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
47. LGALS1 ENSGALG00000012420 13993 1.557 - - 0.844 - - - - - - 0.713 galectin 1 [Source:NCBI gene;Acc:396491]
48. AAMP ENSGALG00000011445 2528 1.547 - - 0.797 0.750 - - - - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
49. ATP6V0C ENSGALG00000009229 125870 1.541 - - 0.765 - - - - - - 0.776 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
50. UBE2E3 ENSGALG00000020793 9517 1.533 - - 0.832 - - - - - - 0.701 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
51. RBBP8 ENSGALG00000014982 3255 1.53 - - 0.796 - - - - - - 0.734 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
52. SLC12A4 ENSGALG00000034179 5674 1.529 - - 0.756 - - - - - - 0.773 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
53. RBX1 ENSGALG00000011993 26090 1.528 - - 0.773 - - - - - - 0.755 ring-box 1 [Source:NCBI gene;Acc:418001]
54. ZNF335 ENSGALG00000041370 4740 1.527 - - 0.738 0.789 - - - - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
55. RAB20 ENSGALG00000016844 3250 1.526 - - - 0.728 - - - - - 0.798 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
56. HS2ST1 ENSGALG00000028423 4153 1.522 - - - 0.718 - - - - - 0.804 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
57. UBN1 ENSGALG00000031416 2848 1.516 - - 0.773 - - - - - - 0.743 ubinuclein 1 [Source:NCBI gene;Acc:416398]
58. NAA30 ENSGALG00000012098 4681 1.514 - - 0.775 - - - - - - 0.739 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
59. MANF ENSGALG00000002362 7518 1.512 - - 0.790 - - - - - - 0.722 mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
60. BZW2 ENSGALG00000010809 29213 1.504 - - 0.716 - - - - - - 0.788 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
61. CCNI ENSGALG00000011457 3203 1.49 - - 0.746 0.744 - - - - - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
62. CUL5 ENSGALG00000017165 2480 1.468 - - 0.759 0.709 - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
63. NPM1 ENSGALG00000002197 24109 1.459 - - 0.736 0.723 - - - - - - nucleophosmin [Source:NCBI gene;Acc:396203]
64. NDC80 ENSGALG00000014801 3237 1.454 - - 0.751 - - - - - - 0.703 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
65. TM9SF3 ENSGALG00000005534 15290 1.432 - - 0.709 0.723 - - - - - - transmembrane 9 superfamily member 3
66. LCMT1 ENSGALG00000005973 1300 0.909 - - 0.909 - - - - - - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
67. CCDC88A ENSGALG00000043587 2208 0.9 - - - - - - - - - 0.900 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
68. MIER1 ENSGALG00000011118 1418 0.899 - - - - - - - - - 0.899 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
69. ODZ3 ODZ3 2213 0.891 - - - - - - - - - 0.891
70. CIB1 ENSGALG00000008302 13946 0.89 - - - - - - - - - 0.890 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
71. SMC6 ENSGALG00000016467 3321 0.887 - - - - - - - - - 0.887 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
72. GXYLT1 ENSGALG00000009532 5682 0.886 - - - - - - - - - 0.886 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
73. SLC30A5 ENSGALG00000014787 5573 0.884 - - - - - - - - - 0.884 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
74. MED15 ENSGALG00000006430 814 0.883 - - 0.883 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
75. CGNL1 ENSGALG00000004294 1177 0.881 - - 0.881 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
76. TRAF3IP1 ENSGALG00000004236 7094 0.881 - - 0.881 - - - - - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
77. FZD6 ENSGALG00000030626 3336 0.881 - - - - - - - - - 0.881 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
78. BBX ENSGALG00000015353 1281 0.88 - - 0.880 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
79. ACADL ENSGALG00000002891 8058 0.878 - - - - - - - - - 0.878 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
80. MAN2C1 ENSGALG00000001615 2362 0.877 - - 0.877 - - - - - - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
81. KMT2C 6306 0.877 - - - - - - - - - 0.877 lysine methyltransferase 2C, transcript variant X14
82. ERI2 1087 0.874 - - - - - - - - - 0.874 ERI1 exoribonuclease family member 2, transcript variant X1
83. RIN2 ENSGALG00000008457 2661 0.873 - - - - - - - - - 0.873 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
84. LAMP2 ENSGALG00000008572 198 0.873 - - - - - - - - - 0.873 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
85. RWDD2B ENSGALG00000015807 3601 0.873 - - - - - - - - - 0.873 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
86. CA3 CA3 200 0.872 - - - 0.872 - - - - - -
87. FBXO25 ENSGALG00000016359 1547 0.872 - - - - - - - - - 0.872 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
88. SEPHS1 ENSGALG00000014575 10701 0.871 - - 0.871 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
89. LRRC42 ENSGALG00000010743 384 0.871 - - 0.871 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
90. UTP23 ENSGALG00000032400 3601 0.871 - - - - - - - - - 0.871 UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
91. AGGF1 ENSGALG00000004311 3011 0.87 - - - - - - - - - 0.870 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
92. ZDHHC7 ENSGALG00000042522 1774 0.87 - - 0.870 - - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
93. NLGN1 ENSGALG00000040938 651 0.87 - - - - - - - - - 0.870 neuroligin 1 [Source:NCBI gene;Acc:424980]
94. PCYT1B 190 0.87 - - 0.870 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
95. PHF13 ENSGALG00000028148 1240 0.869 - - - - - - - - - 0.869 PHD finger protein 13 [Source:NCBI gene;Acc:101750144]
96. SMARCAD1 ENSGALG00000037339 149 0.869 - - 0.869 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
97. ZNF106 ENSGALG00000009081 1520 0.869 - - - - - - - - - 0.869 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
98. SPC25 ENSGALG00000010900 14238 0.868 - - - - - - - - - 0.868 SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
99. CDC5L ENSGALG00000016704 22893 0.867 - - 0.867 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
100. METTL5 ENSGALG00000009676 3252 0.867 - - 0.867 - - - - - - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]

There are 878 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA