Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMC4

Gene Name Gene ID Reads Annotation
SMC4 ENSGALG00000009553 15715 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]











Genes with expression patterns similar to SMC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMC4 ENSGALG00000009553 15715 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
2. SPDL1 ENSGALG00000001942 4403 2.507 - - 0.733 - - - 0.804 - - 0.970 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
3. CAMSAP1 ENSGALG00000001692 2617 2.499 - - 0.894 - - - 0.733 - - 0.872 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
4. CRCP ENSGALG00000002587 8809 2.464 - - 0.819 - - - 0.716 - - 0.929 CGRP receptor component [Source:NCBI gene;Acc:396022]
5. NAA30 ENSGALG00000012098 4681 2.461 - - 0.787 - - - 0.769 - - 0.905 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
6. RAB10 ENSGALG00000016535 5272 2.44 - - 0.776 - - - 0.830 - - 0.834 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
7. SP3 ENSGALG00000031796 8997 2.426 - - 0.824 - - - 0.733 - - 0.869 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
8. ERCC6 ENSGALG00000006254 3452 2.383 - - 0.764 - - - 0.720 - - 0.899 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
9. NUBP1 ENSGALG00000007241 3791 2.339 - - 0.844 - - - 0.719 - - 0.776 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
10. RBBP8 ENSGALG00000014982 3255 2.33 - - 0.818 - - - 0.700 - - 0.812 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
11. LIPA ENSGALG00000006378 4414 2.267 - - 0.795 - - - 0.734 0.738 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
12. FTD FTD 3041 2.22 - - 0.781 - - - 0.719 - - 0.720
13. CTSA ENSGALG00000006876 5380 2.171 - - 0.734 - - - 0.729 0.708 - - cathepsin A [Source:NCBI gene;Acc:428163]
14. WHSC1 1712 1.895 - - 0.934 - - - - - - 0.961 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
15. HYAL3 ENSGALG00000029000 712 1.834 - - 0.874 - - - - - - 0.960 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
16. MRPL50 ENSGALG00000015543 11649 1.834 - - - - - - 0.873 - - 0.961 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
17. ATP6V0C ENSGALG00000009229 125870 1.807 - - 0.884 - - - - - - 0.923 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
18. BMS1 ENSGALG00000002624 8339 1.806 - - 0.895 - - - 0.911 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
19. UCHL3 ENSGALG00000016921 16208 1.802 - - - - - - 0.862 - - 0.940 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
20. NEO1 ENSGALG00000001774 10165 1.793 - - - - - - 0.848 - - 0.945 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
21. PPFIA1 ENSGALG00000035774 5258 1.784 - - - - - - 0.840 - - 0.944 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
22. RAD18 ENSGALG00000008368 7214 1.778 - - 0.874 - - - - - - 0.904 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
23. CNTRL ENSGALG00000001513 1773 1.777 - - 0.818 - - - - - - 0.959 centriolin [Source:NCBI gene;Acc:417121]
24. PRPF38B ENSGALG00000001972 2009 1.772 - - 0.864 - - - - - - 0.908 pre-mRNA processing factor 38B
25. ENSGALG00000009044 ENSGALG00000009044 14492 1.771 - - - - - - 0.828 - - 0.943
26. SLK ENSGALG00000008318 2220 1.769 - - 0.883 - - - - - - 0.886 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
27. CCNA2 ENSGALG00000011881 2574 1.769 - - 0.844 - - - - - - 0.925 cyclin A2 [Source:NCBI gene;Acc:396172]
28. GGA.31975 GGA.31975 8825 1.765 - - - - - - 0.864 - - 0.901
29. GORASP1 ENSGALG00000006033 4033 1.752 - - - - - - 0.801 - - 0.951 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
30. SENP6 ENSGALG00000015901 8013 1.751 - - 0.922 - - - 0.829 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
31. ARHGAP21 ENSGALG00000007721 3961 1.747 - - - - - - 0.787 - - 0.960 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
32. GXYLT1 ENSGALG00000009532 5682 1.745 - - - - - - 0.781 - - 0.964 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
33. PCNP ENSGALG00000015330 15750 1.732 - - - - - - 0.805 - - 0.927 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
34. FANCL ENSGALG00000030022 7423 1.729 - - - - - - 0.866 - - 0.863 FA complementation group L [Source:NCBI gene;Acc:421202]
35. CBLL1 ENSGALG00000038981 6725 1.726 - - 0.874 - - - 0.852 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
36. TWSG1 ENSGALG00000008400 1869 1.725 - - 0.856 - - - - - - 0.869 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
37. TMEM167A ENSGALG00000027332 13862 1.724 - - 0.826 - - - 0.898 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
38. SPTSSA ENSGALG00000025755 3361 1.72 - - - - - - 0.793 - - 0.927 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
39. CPT2 ENSGALG00000010681 3211 1.715 - - 0.772 - - - - - - 0.943 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
40. DGCR2 ENSGALG00000005891 8405 1.71 - - - - - - 0.842 - - 0.868 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
41. MAN2A1 ENSGALG00000000255 4543 1.706 - - - - - - 0.807 - - 0.899 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
42. GABARAPL2 ENSGALG00000003208 9195 1.705 - - 0.765 - - - 0.940 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
43. QDPR ENSGALG00000030070 6953 1.704 - - - - - - 0.790 - - 0.914 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
44. HNRNPLL ENSGALG00000008504 14719 1.702 - - 0.881 - - - - - - 0.821 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
45. NCAPD2 ENSGALG00000039448 8658 1.7 - - 0.848 - - - 0.852 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
46. TMLHE ENSGALG00000007443 3619 1.699 - - 0.775 - - - - - - 0.924 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
47. ODF2 ENSGALG00000004767 3972 1.699 - - - - - - 0.771 - - 0.928 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
48. BZW2 ENSGALG00000010809 29213 1.698 - - 0.780 - - - - - - 0.918 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
49. ECI2 ENSGALG00000012809 3692 1.695 - - - - - - 0.782 - - 0.913 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
50. WBP4 ENSGALG00000016949 5858 1.692 - - 0.820 - - - - - - 0.872 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
51. RBX1 ENSGALG00000011993 26090 1.685 - - 0.831 - - - - - - 0.854 ring-box 1 [Source:NCBI gene;Acc:418001]
52. STRADA ENSGALG00000000550 6912 1.685 - - - - - - 0.771 - - 0.914 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
53. WASF1 ENSGALG00000015066 5628 1.684 - - - - - - 0.794 - - 0.890 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
54. SMC5 ENSGALG00000015118 1799 1.683 - - 0.800 - - - - - - 0.883 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
55. SLC39A6 ENSGALG00000013209 1754 1.683 - - 0.803 - - - - - - 0.880 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
56. UBR2 ENSGALG00000009906 7717 1.683 - - 0.898 - - - 0.785 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
57. CIB1 ENSGALG00000008302 13946 1.683 - - - - - - 0.830 - - 0.853 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
58. SNRNP40 ENSGALG00000000615 32298 1.681 - - - - - - 0.926 - - 0.755 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
59. GTF2E1 ENSGALG00000042320 7712 1.681 - - 0.874 - - - - - - 0.807 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
60. SLC12A4 ENSGALG00000034179 5674 1.679 - - 0.803 - - - - - - 0.876 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
61. HDAC2 ENSGALG00000014991 23458 1.679 - - 0.726 - - - - - - 0.953 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
62. WDR53 ENSGALG00000006395 4938 1.675 - - - - - - 0.785 - - 0.890 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
63. TMX3 ENSGALG00000013757 6387 1.674 - - - - - - 0.841 - - 0.833 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
64. MTMR8 ENSGALG00000007590 6022 1.668 - - - - - - 0.844 - - 0.824 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
65. EBNA1BP2 ENSGALG00000009045 17453 1.667 - - - - - - 0.897 - - 0.770 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
66. FNBP1L ENSGALG00000005850 9219 1.663 - - - - - - 0.804 - - 0.859 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
67. PTTG1 17936 1.663 - - 0.809 - - - 0.854 - - - pituitary tumor-transforming 1, transcript variant X1
68. PTP4A2 ENSGALG00000003265 24826 1.663 - - - - - - 0.814 - - 0.849 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
69. GTF2H2 ENSGALG00000002399 2361 1.662 - - 0.928 - - - 0.734 - - - general transcription factor IIH subunit 2, transcript variant X2
70. TMEM115 ENSGALG00000026965 13050 1.661 - - - - - - 0.788 - - 0.873 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
71. KIF11 ENSGALG00000030597 5528 1.661 - - - - - - 0.704 - - 0.957 kinesin family member 11 [Source:NCBI gene;Acc:423809]
72. ATP6V0A2 ENSGALG00000003194 4824 1.659 - - 0.905 - - - 0.754 - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
73. KMT2C 6306 1.659 - - - - - - 0.750 - - 0.909 lysine methyltransferase 2C, transcript variant X14
74. SLC30A5 ENSGALG00000014787 5573 1.659 - - - - - - 0.717 - - 0.942 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
75. NOC4L ENSGALG00000002272 9644 1.658 - - - - - - 0.862 - - 0.796 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
76. CLIC4 ENSGALG00000001262 11497 1.658 - - - - - - 0.761 - - 0.897 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
77. ADIPOR2 ENSGALG00000035533 6523 1.658 - - 0.876 - - - - - - 0.782 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
78. FZD6 ENSGALG00000030626 3336 1.657 - - 0.760 - - - - - - 0.897 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
79. GSPT1 15580 1.657 - - 0.817 - - - 0.840 - - - G1 to S phase transition 1, transcript variant X1
80. COX5A ENSGALG00000014121 55281 1.657 - - - - - - 0.817 - - 0.840 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
81. BAG5 ENSGALG00000031062 4498 1.655 - - 0.857 - - - 0.798 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
82. GTF2F2 ENSGALG00000016974 7524 1.655 - - - - - - 0.741 - - 0.914 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
83. MIB1 ENSGALG00000014974 3583 1.653 - - 0.892 - - - 0.761 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
84. FBXO5 ENSGALG00000013607 6156 1.651 - - - - - - 0.821 - - 0.830 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
85. WFDC1 ENSGALG00000005503 6152 1.651 - - - - - - 0.708 - - 0.943 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
86. COX17 ENSGALG00000014981 5646 1.65 - - - - - - 0.765 - - 0.885 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
87. ZRANB1 ENSGALG00000031474 3909 1.65 - - - - - - 0.746 - - 0.904 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
88. LSM6 ENSGALG00000009985 18582 1.648 - - - - - - 0.848 - - 0.800 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
89. NUPL1 NUPL1 8197 1.648 - - 0.770 - - - 0.878 - - -
90. TRRAP ENSGALG00000003596 6032 1.648 - - - - - - 0.748 - - 0.900 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
91. WTAP ENSGALG00000011660 10811 1.648 - - 0.848 - - - 0.800 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
92. COL5A2 ENSGALG00000031112 18358 1.647 - - - - - - 0.756 - - 0.891 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
93. UBE2E3 ENSGALG00000020793 9517 1.647 - - 0.827 - - - - - - 0.820 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
94. RPF2 ENSGALG00000037087 12788 1.646 - - - - - - 0.868 - - 0.778 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
95. ATG5 ENSGALG00000015387 7752 1.645 - - 0.787 - - - 0.858 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
96. COMMD7 ENSGALG00000006630 11491 1.644 - - - - - - 0.788 - - 0.856 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
97. LGALS1 ENSGALG00000012420 13993 1.643 - - 0.805 - - - 0.838 - - - galectin 1 [Source:NCBI gene;Acc:396491]
98. RAD50 ENSGALG00000006794 4308 1.643 - - 0.706 - - - - - - 0.937 RAD50 double strand break repair protein, transcript variant X4
99. PIGK ENSGALG00000009015 7942 1.643 - - 0.876 - - - 0.767 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
100. GSTAL2 ENSGALG00000028551 4899 1.642 - - - - - - 0.741 - - 0.901 glutathione S-transferase alpha-like 2, transcript variant X4

There are 1826 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA