Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMC2

Gene Name Gene ID Reads Annotation
SMC2 ENSGALG00000015691 34013 structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]











Genes with expression patterns similar to SMC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMC2 ENSGALG00000015691 34013 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
2. ATRX ENSGALG00000007843 34172 2.388 0.846 - 0.771 - - 0.771 - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
3. ATP2A2 ENSGALG00000032287 12734 1.804 - - - - 0.901 - 0.903 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
4. KNOP1 ENSGALG00000002042 6251 1.652 0.771 - - - 0.881 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
5. NAP1L1 ENSGALG00000010238 14506 1.649 0.762 - - - 0.887 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
6. SURF6 ENSGALG00000038413 11178 1.467 0.749 - - - - - - 0.718 - - surfeit 6 [Source:NCBI gene;Acc:417160]
7. PFDN4 ENSGALG00000007792 26514 0.991 - - - - - - 0.991 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
8. EIF3J ENSGALG00000008187 43570 0.991 - - - - - - 0.991 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
9. DENR ENSGALG00000003795 30805 0.991 - - - - - - 0.991 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
10. ATP5MC1 ENSGALG00000001330 37766 0.99 - - - - - - 0.990 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
11. POLR2D ENSGALG00000002057 14548 0.988 - - - - - - 0.988 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
12. FBN3 ENSGALG00000037625 23313 0.988 - - - - - - 0.988 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
13. IMP4 ENSGALG00000029152 11669 0.987 - - - - - - 0.987 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
14. ENSGALG00000004773 ENSGALG00000004773 10418 0.986 - - - - - - 0.986 - - -
15. MOB3A ENSGALG00000031729 9690 0.986 - - - - - - 0.986 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
16. FAM103A1 17380 0.984 - - - - - - 0.984 - - - family with sequence similarity 103 member A1, transcript variant X2
17. M6PR ENSGALG00000031681 9442 0.983 - - - - - - 0.983 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
18. POLR1C ENSGALG00000010349 7059 0.982 - - - - - - 0.982 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
19. HOXD8 ENSGALG00000037272 4338 0.981 - - - - - - 0.981 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
20. PHGDH ENSGALG00000002988 6912 0.981 - - - - - - 0.981 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
21. CTU2 4818 0.981 - - - - - - 0.981 - - - cytosolic thiouridylase subunit 2, transcript variant X3
22. DDX21 ENSGALG00000004144 13105 0.981 - - - - - - 0.981 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
23. MRPL32 ENSGALG00000037258 6861 0.981 - - - - - - 0.981 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
24. CAND1 4541 0.979 - - - - - - 0.979 - - - cullin associated and neddylation dissociated 1
25. PTBP2 ENSGALG00000005552 3443 0.979 - - - - - - 0.979 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
26. ENSGALG00000014190 ENSGALG00000014190 5735 0.979 - - - - - - 0.979 - - -
27. PRDX6 ENSGALG00000003053 17928 0.979 - - - - - - 0.979 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
28. EGFLAM ENSGALG00000003726 4588 0.979 - - - - - - 0.979 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
29. TMC1 ENSGALG00000015145 1180 0.978 - - - - - - 0.978 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
30. TMEM62 ENSGALG00000009260 1170 0.978 - - - - - - 0.978 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
31. TMEM120B ENSGALG00000004254 2819 0.978 - - - - - - 0.978 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
32. TMEM97 ENSGALG00000005702 2037 0.978 - - - - - - 0.978 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
33. ABCC10 2213 0.978 - - - - - - 0.978 - - - ATP binding cassette subfamily C member 10, transcript variant X10
34. BMP3 ENSGALG00000035052 3260 0.978 - - - - - - 0.978 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
35. DYNLL2 ENSGALG00000005522 17107 0.978 - - - - - - 0.978 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
36. MCM2 ENSGALG00000006037 13458 0.976 - - - - - - 0.976 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
37. ITGA1 ENSGALG00000014891 11378 0.973 - - - - - - 0.973 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
38. CALM_1 CALM_1 57812 0.967 - - - - - - 0.967 - - -
39. CHNTHL1 CHNTHL1 4976 0.965 - - - - - - 0.965 - - -
40. ALDH1A2 ENSGALG00000004270 49483 0.936 - - - - - - 0.936 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
41. UQCRFS1 ENSGALG00000025819 66637 0.932 - - - - - - 0.932 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
42. OLA1 ENSGALG00000009325 26414 0.928 - - - - 0.928 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
43. TBCA ENSGALG00000004353 18510 0.909 - - - - 0.909 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
44. RPL24 ENSGALG00000015339 227460 0.909 - - - - 0.909 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
45. PSMC2 ENSGALG00000008236 25980 0.908 - - - - 0.908 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
46. SOD1 ENSGALG00000015844 35836 0.907 - - - - - - - 0.907 - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
47. CCT4 ENSGALG00000008812 78267 0.907 - - - - 0.907 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
48. SRSF3 ENSGALG00000000533 51281 0.9 - - - - 0.900 - - - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
49. STRAP ENSGALG00000013092 13100 0.899 - - - - 0.899 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
50. MRPL23 ENSGALG00000006561 13737 0.897 - - - - 0.897 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
51. KPNA3 ENSGALG00000017009 17330 0.897 - - - - 0.897 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
52. NOP58 ENSGALG00000008454 34630 0.896 - - - - 0.896 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
53. PUM1 ENSGALG00000042598 9392 0.896 - - - - 0.896 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
54. TK2 ENSGALG00000034216 5394 0.895 - - - - 0.895 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
55. PNRC2 ENSGALG00000004122 19228 0.895 - - - - 0.895 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
56. RANGAP1 ENSGALG00000011966 20170 0.895 - - - - 0.895 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
57. METTL23 ENSGALG00000001790 7906 0.894 - - - - 0.894 - - - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
58. NFASC ENSGALG00000031776 4264 0.893 - - - - 0.893 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
59. IGDCC4 ENSGALG00000007410 5457 0.892 - - - - 0.892 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
60. MRPS25 ENSGALG00000008506 12131 0.891 - - - - 0.891 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
61. DYNLRB1 ENSGALG00000034509 28361 0.89 - - - - 0.890 - - - - - dynein light chain roadblock-type 1
62. GBAS 18453 0.89 - - - - 0.890 - - - - - glioblastoma amplified sequence
63. ENSGALG00000014852 ENSGALG00000014852 15288 0.89 - - - - 0.890 - - - - -
64. OGT ENSGALG00000005425 31074 0.889 - - - - 0.889 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
65. PSPC1 ENSGALG00000017142 13036 0.888 - - - - 0.888 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
66. PCBP4 ENSGALG00000027695 7937 0.888 - - - - 0.888 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
67. MKI67 ENSGALG00000025996 28136 0.888 - - - - 0.888 - - - - - marker of proliferation Ki-67, transcript variant X3
68. ATG5 ENSGALG00000015387 7752 0.887 - - - - 0.887 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
69. SFSWAP ENSGALG00000002487 9977 0.887 - - - - 0.887 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
70. RAP1B ENSGALG00000009927 26562 0.887 - - - - 0.887 - - - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
71. PAPOLA ENSGALG00000033099 20532 0.886 - - - - 0.886 - - - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
72. TLK2 ENSGALG00000000410 4690 0.886 - - - - 0.886 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
73. CSNK1G1 ENSGALG00000030812 31618 0.886 - - - - 0.886 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
74. SAR1B ENSGALG00000038753 6493 0.885 - - - - 0.885 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
75. IGBP1 ENSGALG00000044628 9200 0.885 - - - - 0.885 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
76. LARP1 ENSGALG00000040109 14808 0.885 - - - - 0.885 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
77. AATF ENSGALG00000005420 6501 0.884 - - - - 0.884 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
78. C20H20ORF24 ENSGALG00000001054 22026 0.883 - - - - 0.883 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
79. SKP2 ENSGALG00000003547 14637 0.882 - - - - 0.882 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
80. COMMD8 ENSGALG00000026279 13509 0.881 - - - - 0.881 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
81. GFPT1 ENSGALG00000036391 14025 0.881 - - - - 0.881 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
82. POLR2B ENSGALG00000011387 4864 0.88 - - - - 0.880 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
83. COIL ENSGALG00000003158 7806 0.88 - - - - 0.880 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
84. DHFR ENSGALG00000026757 18478 0.879 - - - - 0.879 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
85. FH ENSGALG00000013165 13669 0.879 - - - - 0.879 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
86. UBE2N ENSGALG00000030515 32059 0.879 - - - - 0.879 - - - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
87. NAA25 ENSGALG00000041821 12729 0.878 - - - - 0.878 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
88. CBWD1 ENSGALG00000010147 2765 0.877 - - - - 0.877 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
89. CZH9ORF41 CZH9ORF41 3492 0.877 - - - - 0.877 - - - - -
90. NDUFA8 ENSGALG00000040987 49453 0.877 - - - - 0.877 - - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
91. EXO1 ENSGALG00000010748 7572 0.877 - - - - 0.877 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
92. EAPP ENSGALG00000010007 5080 0.876 - - - - 0.876 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
93. TRAPPC12 ENSGALG00000016387 2593 0.875 - - - - 0.875 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
94. SSR2 ENSGALG00000000764 32190 0.875 - - - - 0.875 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
95. BAG4 ENSGALG00000003254 5751 0.874 - - - - 0.874 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
96. STK3 ENSGALG00000032850 6339 0.874 - - - - 0.874 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
97. SHROOM2 ENSGALG00000030802 4517 0.874 - - - - 0.874 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
98. TLCD1 ENSGALG00000003973 17569 0.874 - - - - 0.874 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
99. MRPS27 ENSGALG00000015002 6541 0.873 - - - - 0.873 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
100. PLAA ENSGALG00000001782 5459 0.873 - - - - 0.873 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA