Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMC1B

Gene Name Gene ID Reads Annotation
SMC1B ENSGALG00000014228 19 structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]











Genes with expression patterns similar to SMC1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMC1B ENSGALG00000014228 19 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
2. SRMS ENSGALG00000005852 174 1.872 - - - - - - - 0.994 - 0.878 src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
3. UCP3 ENSGALG00000017316 30 1.841 - - - - - - - 0.994 - 0.847 uncoupling protein 3 [Source:NCBI gene;Acc:373896]
4. GAR1 ENSGALG00000020164 149 1.732 - - - - - 0.787 - 0.945 - - GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]
5. ZBTB33 ENSGALG00000008611 15 1.585 - - - - - 0.735 - - - 0.850 zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
6. ADAMTS15 ENSGALG00000001407 11 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
7. LIPML4 ENSGALG00000006302 2 1 - - - - - 1.000 - - - - lipase member M-like 4
8. EGF ENSGALG00000012155 8 1 - - - - - 1.000 - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
9. GAK ENSGALG00000015352 99 1 - - - - - 1.000 - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
10. PIK3R4 ENSGALG00000040917 10 1 - - - - - 1.000 - - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
11. CRYAA ENSGALG00000016199 12 1 - - - - - 1.000 - - - - crystallin alpha A [Source:NCBI gene;Acc:418546]
12. ENSGALG00000011449 ENSGALG00000011449 2 1 - - - - - 1.000 - - - -
13. SPP2 ENSGALG00000004129 34 1 - - - - - - - - - 1.000 secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
14. TOR3A ENSGALG00000004216 1 1 - - - - - 1.000 - - - - torsin family 3 member A [Source:HGNC Symbol;Acc:HGNC:11997]
15. CAPN3 ENSGALG00000009050 3 1 - - - - - 1.000 - - - - calpain 3 [Source:NCBI gene;Acc:423233]
16. ENSGALG00000021517 ENSGALG00000021517 7 1 - - - - - 1.000 - - - -
17. PBEF1 PBEF1 25 0.997 - - - - - 0.997 - - - -
18. ARHGAP39 ENSGALG00000001536 15 0.994 - - - - - - - 0.994 - - Rho GTPase activating protein 39, transcript variant X2
19. ENSGALG00000018875 ENSGALG00000018875 6 0.994 - - - - - - - 0.994 - -
20. UPK3A ENSGALG00000014227 7 0.994 - - - - - - - 0.994 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
21. GPR183 ENSGALG00000016881 5 0.994 - - - - - - - 0.994 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
22. SLC35A3 12 0.994 - - - - - - - 0.994 - - solute carrier family 35 member A3, transcript variant X7
23. C11ORF61 C11ORF61 41 0.994 - - - - - - - 0.994 - -
24. CELSR1 ENSGALG00000043355 19 0.994 - - - - - - - 0.994 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
25. F13B ENSGALG00000002369 1 0.994 - - - - - - - 0.994 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
26. ENSGALG00000028428 ENSGALG00000028428 3 0.994 - - - - - - - 0.994 - -
27. GRK7 ENSGALG00000002800 0 0.994 - - - - - - - 0.994 - - G protein-coupled receptor kinase 7 [Source:HGNC Symbol;Acc:HGNC:17031]
28. SERPING1 ENSGALG00000007381 144 0.994 - - - - - - - 0.994 - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
29. VDHAP ENSGALG00000010417 9 0.994 - - - - - - - 0.994 - - vitamin D3 hydroxylase associated protein [Source:NCBI gene;Acc:395824]
30. MID2 ENSGALG00000003860 3 0.994 - - - - - - - 0.994 - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
31. EFHC2 ENSGALG00000016221 8 0.994 - - - - - - - 0.994 - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
32. HHIPL2 ENSGALG00000045729 9 0.994 - - - - - - - 0.994 - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
33. KREMEN1 ENSGALG00000005808 5 0.994 - - - - - - - 0.994 - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
34. GRID2 ENSGALG00000010397 6 0.994 - - - - - - - 0.994 - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
35. SI ENSGALG00000009511 5 0.994 - - - - - - - 0.994 - - sucrase-isomaltase
36. LRRTM1 ENSGALG00000015967 85 0.994 - - - - - - - 0.994 - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
37. MLH1 ENSGALG00000039169 19 0.994 - - - - - - - 0.994 - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
38. GAL9 GAL9 1 0.994 - - - - - - - 0.994 - -
39. BTBD17 ENSGALG00000023359 87 0.994 - - - - - - - 0.994 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
40. gga-mir-6561 ENSGALG00000026650 135 0.994 - - - - - - - 0.994 - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
41. ITGA2 ENSGALG00000014903 31 0.994 - - - - - - - 0.994 - - integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]
42. FNIP1 ENSGALG00000017462 4 0.994 - - - - - - - 0.994 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
43. CMTR1 ENSGALG00000010149 12 0.994 - - - - - - - 0.994 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
44. ABHD14A 174 0.994 - - - - - - - 0.994 - - abhydrolase domain containing 14A
45. ENSGALG00000007420 ENSGALG00000007420 7 0.994 - - - - - - - 0.994 - -
46. SH3BP4 ENSGALG00000004140 4 0.994 - - - - - - - 0.994 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
47. WDR27 ENSGALG00000037464 9 0.994 - - - - - - - 0.994 - - WD repeat domain 27
48. CRIP2 ENSGALG00000026471 4 0.994 - - - - - - - 0.994 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
49. VIL1 ENSGALG00000037286 5 0.994 - - - - - - - 0.994 - - villin 1 [Source:NCBI gene;Acc:396423]
50. C17orf105 C17orf105 11 0.994 - - - - - - - 0.994 - -
51. GIPC2 ENSGALG00000008902 6 0.994 - - - - - - - 0.994 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
52. RNF215 ENSGALG00000040925 19 0.994 - - - - - - - 0.994 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
53. PABPN1L ENSGALG00000006242 3 0.994 - - - - - - - 0.994 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
54. OLFM4 ENSGALG00000016943 7 0.994 - - - - - - - 0.994 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
55. SLC17A8 ENSGALG00000041122 57 0.994 - - - - - - - 0.994 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
56. LPGAT1 ENSGALG00000009848 33 0.994 - - - - - - - 0.994 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
57. ENSGALG00000026501 ENSGALG00000026501 39 0.994 - - - - - - - 0.994 - -
58. SNAPC1 ENSGALG00000011868 65 0.994 - - - - - - - 0.994 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
59. MAVS ENSGALG00000040428 1 0.994 - - - - - - - 0.994 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
60. EPN3 ENSGALG00000023279 10 0.994 - - - - - - - 0.994 - - epsin 3 [Source:HGNC Symbol;Acc:HGNC:18235]
61. TNS3 ENSGALG00000039139 63 0.994 - - - - - - - 0.994 - - tensin 3 [Source:NCBI gene;Acc:420792]
62. TOR1BL ENSGALG00000023709 1 0.994 - - - - - - - 0.994 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
63. U2_1 U2_1 13 0.994 - - - - - - - 0.994 - -
64. ECT2 ENSGALG00000009157 31 0.994 - - - - - - - 0.994 - - epithelial cell transforming 2, transcript variant X7
65. SCN3A ENSGALG00000011040 62 0.994 - - - - - - - 0.994 - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
66. KCNS3 ENSGALG00000016470 4 0.986 - - - - - 0.986 - - - - potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
67. TLR15 ENSGALG00000008166 29 0.982 - - - - - 0.982 - - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
68. ATRN ENSGALG00000016034 16 0.979 - - - - - 0.979 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]
69. ENSGALG00000027164 ENSGALG00000027164 8 0.979 - - - - - 0.979 - - - -
70. ENSGALG00000027367 ENSGALG00000027367 7 0.975 - - - - - 0.975 - - - -
71. FAM150B 44 0.971 - - - - - 0.971 - - - - family with sequence similarity 150 member B, transcript variant X2
72. ZNF804A ENSGALG00000023886 52 0.963 - - - - 0.963 - - - - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
73. SLC22A18 ENSGALG00000006454 24 0.962 - - - - - 0.962 - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
74. A1CF ENSGALG00000003765 36 0.96 - - - - - 0.960 - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
75. CRYBA4 ENSGALG00000005634 56 0.96 - - - - - 0.960 - - - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
76. CCDC125 ENSGALG00000015572 51 0.958 - - - - - 0.958 - - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
77. TDRP ENSGALG00000016356 36 0.955 - - - - - 0.955 - - - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
78. PKD2 ENSGALG00000010921 55 0.953 - - - - - 0.953 - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
79. DND1 2 0.951 - - - - - - - - - 0.951 DND microRNA-mediated repression inhibitor 1
80. EDAR ENSGALG00000016809 81 0.949 - - - - - - - 0.949 - - ectodysplasin A receptor [Source:NCBI gene;Acc:428015]
81. SNORA3 SNORA3 14 0.948 - - - - - 0.948 - - - -
82. NAALADL2 ENSGALG00000023670 39 0.947 - - - - - 0.947 - - - - N-acetylated alpha-linked acidic dipeptidase like 2 [Source:HGNC Symbol;Acc:HGNC:23219]
83. SNORD103 SNORD103 25 0.945 - - - - - - - 0.945 - -
84. MLC1 ENSGALG00000040038 206 0.945 - - - - - - - 0.945 - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
85. CELA2A ENSGALG00000004568 10 0.945 - - - - - - - 0.945 - - chymotrypsin like elastase family member 2A [Source:NCBI gene;Acc:419486]
86. ENSGALG00000015321 ENSGALG00000015321 18 0.945 - - - - - - - 0.945 - -
87. KIAA2022 43 0.945 - - - - - - - 0.945 - - KIAA2022, transcript variant X4
88. GRK6 ENSGALG00000014054 6 0.937 - - - - - 0.937 - - - - G protein-coupled receptor kinase 6 [Source:HGNC Symbol;Acc:HGNC:4545]
89. ANKRD40L ENSGALG00000026189 887 0.932 - - - - - 0.932 - - - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
90. ACE2 ENSGALG00000016554 7 0.929 - - - - - 0.929 - - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
91. RTKN2 ENSGALG00000002980 50 0.924 - - - - - 0.924 - - - - rhotekin 2 [Source:NCBI gene;Acc:423660]
92. OCA2 ENSGALG00000016740 421 0.92 - - - - - - - 0.920 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
93. ENSGALG00000026135 ENSGALG00000026135 16 0.919 - - - - - - - - - 0.919
94. IL8 ENSGALG00000026098 16 0.919 - - - - - - - - - 0.919 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
95. LY96 ENSGALG00000032701 18 0.919 - - - - - - - - - 0.919 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
96. VSTM2A ENSGALG00000041764 2 0.919 - - - - - - - - - 0.919 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
97. ENSGALG00000014502 ENSGALG00000014502 2 0.919 - - - - - - - - - 0.919
98. GTSF1 ENSGALG00000001109 15 0.919 - - - - - - - - - 0.919 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
99. SLC4A5 ENSGALG00000032146 3 0.919 - - - - - - - - - 0.919 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
100. NMU ENSGALG00000020151 29 0.919 - - - - - - - - - 0.919 neuromedin U [Source:NCBI gene;Acc:422748]

There are 214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA