Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMARCD3

Gene Name Gene ID Reads Annotation
SMARCD3 ENSGALG00000043137 401 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]











Genes with expression patterns similar to SMARCD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMARCD3 ENSGALG00000043137 401 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
2. BAAT ENSGALG00000040619 579 1.604 - - - 0.709 - - - 0.895 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
3. SLC2A9 ENSGALG00000014971 751 1.542 - - - - - - 0.841 0.701 - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
4. GANC ENSGALG00000009036 731 1.466 - - - - - - 0.740 0.726 - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
5. SELP 28 0.917 - - - - - - - 0.917 - - selectin P, transcript variant X9
6. POLR1A ENSGALG00000038160 236 0.917 - - - - - - - 0.917 - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
7. OGN ENSGALG00000026736 223 0.914 - - - - - - - 0.914 - - osteoglycin [Source:NCBI gene;Acc:374039]
8. KSR1 ENSGALG00000005685 78 0.913 - - - - - - - 0.913 - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
9. DDB1 ENSGALG00000042333 275 0.909 - - - - - - - 0.909 - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
10. GRHPR ENSGALG00000005423 1567 0.907 - - - - - - - 0.907 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
11. GLOD5 ENSGALG00000025991 17 0.905 - - - - - - - 0.905 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
12. ENSGALG00000021106 ENSGALG00000021106 35 0.904 - - - - - - - 0.904 - -
13. STK24 ENSGALG00000016885 442 0.904 - - - - - - - 0.904 - - serine/threonine kinase 24 [Source:NCBI gene;Acc:418780]
14. LOX ENSGALG00000028063 1488 0.9 - - - - - - - 0.900 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
15. RAB19 ENSGALG00000012850 155 0.898 - - - - - - - 0.898 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
16. TMEM248 ENSGALG00000033954 248 0.897 - - - - - - - 0.897 - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
17. PTDSS2 ENSGALG00000004300 682 0.896 - - - - - - - 0.896 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
18. PAPSS2 ENSGALG00000003689 278 0.895 - - - - - - - 0.895 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
19. PLXNC1 ENSGALG00000011309 69 0.893 - - - - - - - 0.893 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
20. TGM4 ENSGALG00000033171 19 0.893 - - - - - - - 0.893 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
21. P4HB ENSGALG00000038290 286 0.892 - - - - - - - 0.892 - - prolyl 4-hydroxylase subunit beta [Source:NCBI gene;Acc:374091]
22. METTL24 ENSGALG00000041120 60 0.891 - - - - - - - 0.891 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
23. AVP ENSGALG00000014117 19 0.891 - - - - - - - 0.891 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
24. ENSGALG00000026913 ENSGALG00000026913 12 0.891 - - - - - - - 0.891 - -
25. FBP1 ENSGALG00000012613 258 0.891 - - - - - - - 0.891 - - fructose-bisphosphatase 1 [Source:NCBI gene;Acc:395218]
26. WNT16 ENSGALG00000028069 157 0.891 - - - - - - - 0.891 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
27. TMEM45B ENSGALG00000001203 48 0.89 - - - - - - - 0.890 - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
28. MIF4GD ENSGALG00000026715 41 0.89 - - - - - - - 0.890 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
29. ABCA4 ENSGALG00000005752 15 0.889 - - - - - - - 0.889 - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
30. CCDC173 358 0.888 - - - - - - 0.888 - - - coiled-coil domain containing 173
31. IFT88 1241 0.888 - - - - - - - 0.888 - - intraflagellar transport 88, transcript variant X3
32. FBXL18 ENSGALG00000004611 97 0.888 - - - - - - - 0.888 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
33. FHL1 ENSGALG00000006190 22 0.886 - - - - - - - 0.886 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
34. ADAM17 ENSGALG00000016427 49 0.886 - - - - - - - 0.886 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
35. OSBP ENSGALG00000030548 439 0.885 - - - - - - - 0.885 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
36. EPHA1 ENSGALG00000014687 174 0.885 - - - - - - - 0.885 - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
37. MAT2A ENSGALG00000015366 17 0.885 - - - - - - - 0.885 - - methionine adenosyltransferase 2A, transcript variant X1
38. ENSGALG00000027352 ENSGALG00000027352 69 0.884 - - - - - - - 0.884 - -
39. KIAA1671 ENSGALG00000005512 2540 0.883 - - - - - - - 0.883 - - KIAA1671 [Source:NCBI gene;Acc:768701]
40. UGT8L ENSGALG00000005599 93 0.882 - - - - - - - 0.882 - - UDP glycosyltransferase 8-like
41. CXADR ENSGALG00000015701 96 0.881 - - - - - - 0.881 - - - coxsackie virus and adenovirus receptor, transcript variant X2
42. SOD3 ENSGALG00000018557 16 0.88 - - - - - - - 0.880 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
43. RBBP8NL ENSGALG00000045938 89 0.88 - - - - - - - 0.880 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
44. TP73 ENSGALG00000001006 335 0.879 - - - - - - 0.879 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
45. KIAA1456 230 0.878 - - - - - 0.878 - - - - KIAA1456, transcript variant X2
46. VPS29L ENSGALG00000005951 31 0.878 - - - - - - - 0.878 - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
47. PLK4 ENSGALG00000010195 514 0.877 - - - - - - 0.877 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
48. C4orf47 ENSGALG00000013287 44 0.877 - - - - - - - 0.877 - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
49. PPP2R3A ENSGALG00000034512 1091 0.875 - - - - - - 0.875 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
50. ARSD ENSGALG00000016648 33 0.874 - - - - - - - 0.874 - - arylsulfatase D, transcript variant X1
51. SERPINF2 ENSGALG00000002987 236 0.874 - - - - - - - 0.874 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
52. CYP3A4 ENSGALG00000004436 75 0.872 - - - - - - - 0.872 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
53. TMEM65 ENSGALG00000037371 776 0.872 - - - - - - 0.872 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
54. ENSGALG00000016213 ENSGALG00000016213 33 0.872 - - - - - - - 0.872 - -
55. GJB1 ENSGALG00000005541 261 0.871 - - - - - - - 0.871 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
56. SLC16A14 ENSGALG00000002897 157 0.87 - - - - - - 0.870 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
57. C1QA ENSGALG00000021569 343 0.87 - - - - - - - 0.870 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
58. LYRM1 ENSGALG00000002273 1523 0.869 - - - - - - 0.869 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
59. PC7 PC7 1105 0.867 - - - - - - - 0.867 - -
60. FOXRED1 ENSGALG00000046347 4176 0.866 - - - - - - 0.866 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
61. DAG1 ENSGALG00000037784 1012 0.864 - - - - - - - 0.864 - - dystroglycan 1 [Source:NCBI gene;Acc:100049058]
62. IQCH ENSGALG00000007909 128 0.863 - - - - - - 0.863 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
63. LGR5 ENSGALG00000010163 2931 0.862 - - - - - - - 0.862 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
64. AFG3L2 ENSGALG00000013853 1138 0.86 - - - - - - 0.860 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
65. PTPN21 ENSGALG00000010616 129 0.86 - - - - - - 0.860 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
66. C1orf159 ENSGALG00000027363 1672 0.86 - - - - - - - 0.860 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
67. IGFBP4 ENSGALG00000040672 608 0.86 - - - - - - - 0.860 - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
68. CCDC102A ENSGALG00000029999 324 0.859 - - - - - - - 0.859 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
69. ADAP2 ENSGALG00000003319 134 0.858 - - - - - - 0.858 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
70. FAM69A ENSGALG00000005918 157 0.858 - - - - - - 0.858 - - - family with sequence similarity 69 member A, transcript variant X4
71. KLHL32 68 0.858 - - - - - - - 0.858 - - kelch like family member 32, transcript variant X3
72. CENPT ENSGALG00000028900 674 0.858 - - - - - - 0.858 - - - centromere protein T [Source:NCBI gene;Acc:415654]
73. LOC769139 ENSGALG00000026754 753 0.858 - - - - - - 0.858 - - - feather keratin 1-like, transcript variant X2
74. EREG ENSGALG00000010864 46 0.857 - - - - - - - 0.857 - - epiregulin [Source:NCBI gene;Acc:408036]
75. PRKAA1 ENSGALG00000014832 547 0.856 - - - - - - - 0.856 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
76. KIAA1244 KIAA1244 62 0.855 - - - - - - 0.855 - - -
77. ORC6 ENSGALG00000004342 454 0.855 - - - - - - - 0.855 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
78. ASH1L ENSGALG00000014638 803 0.855 - - - - - - 0.855 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
79. MAP3K19 ENSGALG00000028457 17 0.854 - - - - - - 0.854 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
80. CBLN1 ENSGALG00000042664 15 0.854 - - - - - - 0.854 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
81. MBL2 ENSGALG00000002507 17 0.854 - - - - - - 0.854 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
82. FAM46C 13 0.854 - - - - - - 0.854 - - - family with sequence similarity 46 member C
83. CHST9 ENSGALG00000019489 21 0.854 - - - - - - 0.854 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
84. SCTR ENSGALG00000012106 49 0.852 - - - - - - 0.852 - - - secretin receptor [Source:NCBI gene;Acc:770943]
85. RNF170 ENSGALG00000015386 296 0.85 - - - - - - 0.850 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
86. NR0B1 ENSGALG00000016287 481 0.849 - - - - - - - 0.849 - - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
87. CAT-1 CAT-1 115 0.849 - - - - - - 0.849 - - -
88. HN1L HN1L 247 0.847 - - - - - - 0.847 - - -
89. MXRA8 ENSGALG00000001561 181 0.847 - - - - - - - 0.847 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
90. CIDEA ENSGALG00000034500 405 0.847 - - - - - - - 0.847 - - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
91. LANCL1 ENSGALG00000002921 571 0.846 - - - - - - - 0.846 - - LanC like 1 [Source:NCBI gene;Acc:424006]
92. PANX1 ENSGALG00000039751 70 0.846 - - - - - - 0.846 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
93. TFB1M ENSGALG00000013647 84 0.845 - - - - - - 0.845 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
94. TRUB1 ENSGALG00000009091 1005 0.845 - - - - - - - 0.845 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
95. TAP1 ENSGALG00000035075 54 0.845 - - - - - - 0.845 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
96. EFCAB7 ENSGALG00000010998 13 0.845 - - - - - - 0.845 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
97. RASSF8 ENSGALG00000014041 850 0.844 - - - - - - - 0.844 - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
98. ENSGALG00000001886 ENSGALG00000001886 1024 0.844 - - - - - - - 0.844 - -
99. KLF8 ENSGALG00000007570 1651 0.842 - - - - - - - 0.842 - - Kruppel-like factor 8, transcript variant X6
100. LGI2 ENSGALG00000043283 433 0.842 - - - - - - 0.842 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA