Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCC2

Gene Name Gene ID Reads Annotation
SMARCC2 ENSDARG00000077946 702 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]










Genes with expression patterns similar to SMARCC2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMARCC2 ENSDARG00000077946 702 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
2. rnf44 ENSDARG00000068582 1612 2.274 - - 0.832 - - - 0.733 0.709 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
3. isoc1 ENSDARG00000060069 1621 2.171 - - - - - - 0.713 0.722 0.736 isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
4. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.643 - - - - - - - 0.808 0.835 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
5. bcl11ba ENSDARG00000062510 169 1.597 - 0.861 - - - - - - 0.736 B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
6. adora1 adora1 149 1.588 - 0.861 - - - - 0.727 - -
7. irf2bpl ENSDARG00000004297 1861 1.585 - - - - - - - 0.880 0.705 interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
8. unc13c 197 1.56 0.712 - - - - - 0.848 - - unc-13 homolog C (C. elegans)
9. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.556 - - - - - - - 0.771 0.785 T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
10. tmem198a ENSDARG00000042115 1694 1.551 - - 0.736 - - - - 0.815 - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
11. gap43 ENSDARG00000099744 4114 1.55 - - - - - - - 0.787 0.763 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
12. dpysl5a ENSDARG00000011141 1827 1.548 - 0.770 - - - - - - 0.778 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
13. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.543 - - - - - - - 0.760 0.783 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
14. atp1a3a ENSDARG00000018259 5393 1.516 - 0.758 - - - - - 0.758 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
15. C24H17orf96 C24H17orf96 1538 1.515 - - 0.777 - - - - - 0.738
16. PBLD_1 PBLD_1 585 1.494 0.709 0.785 - - - - - - -
17. tuba2 ENSDARG00000045014 1490 1.481 - - - - - - - 0.750 0.731 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
18. FAM171A2 FAM171A2 707 1.469 - 0.723 0.746 - - - - - -
19. fzd5 ENSDARG00000025420 1082 1.466 - - - - - - - 0.731 0.735 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
20. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.458 - 0.725 - - - - - - 0.733 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
21. olfm1a ENSDARG00000018270 107 1.453 0.729 - - - - - 0.724 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
22. pcdh19 ENSDARG00000034344 2378 1.443 - - - 0.712 - - - - 0.731 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
23. insm1b ENSDARG00000053301 2032 1.435 - - 0.722 - - - - - 0.713 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
24. bmi1b ENSDARG00000013076 1020 1.405 0.700 - - - - - - - 0.705 bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
25. mapk8ip2 ENSDARG00000063157 467 1 - 1.000 - - - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
26. zgc:174310 ENSDARG00000076442 112 0.972 - 0.972 - - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
27. TMEM100 TMEM100 258 0.927 - 0.927 - - - - - - -
28. lrrk2 ENSDARG00000006169 82 0.926 - 0.926 - - - - - - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
29. CABZ01026370.1 CABZ01026370.1 286 0.922 - 0.922 - - - - - - -
30. megf11 ENSDARG00000062686 230 0.921 - - - - - - 0.921 - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
31. si:dkey-262g12.3 ENSDARG00000094612 41 0.919 - 0.919 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
32. COL27A1 COL27A1 94 0.911 - 0.911 - - - - - - -
33. si:ch211-76l23.6 si:ch211-76l23.6 68 0.904 - 0.904 - - - - - - -
34. TMEM116 TMEM116 96 0.904 - 0.904 - - - - - - -
35. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.904 - 0.904 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
36. rtn4r ENSDARG00000090035 46 0.904 - 0.904 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
37. ovca2 ENSDARG00000103748 38 0.904 - 0.904 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
38. parp12a ENSDARG00000042496 82 0.904 - 0.904 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
39. nmnat2 ENSDARG00000004580 370 0.903 - 0.903 - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
40. fam20c fam20c 603 0.893 - 0.893 - - - - - - -
41. dsel dsel 96 0.892 - 0.892 - - - - - - -
42. rims3 ENSDARG00000062305 202 0.885 - - - - - - 0.885 - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
43. nell2b ENSDARG00000062797 854 0.879 - 0.879 - - - - - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
44. gria2b ENSDARG00000052765 188 0.879 - 0.879 - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
45. si:dkey-97a13.9 si:dkey-97a13.9 169 0.879 - 0.879 - - - - - - -
46. FAM163A ENSDARG00000093021 86 0.879 - 0.879 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
47. FP565458.1 FP565458.1 61 0.879 - 0.879 - - - - - - -
48. gdf6b ENSDARG00000005510 106 0.879 - 0.879 - - - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
49. jmjd4 ENSDARG00000058995 199 0.877 - 0.877 - - - - - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
50. ankrd10b ENSDARG00000004771 654 0.874 - - - - - - 0.874 - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
51. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.873 - 0.873 - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
52. dixdc1a ENSDARG00000025302 716 0.872 - 0.872 - - - - - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
53. sall3b ENSDARG00000057586 982 0.87 - 0.870 - - - - - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. CDHR2_1 CDHR2_1 12 0.865 - 0.865 - - - - - - -
55. prkrira 971 0.865 - - - - - - 0.865 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
56. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 0.861 - 0.861 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
57. mir301c 84 0.861 - 0.861 - - - - - - - microRNA 301c
58. CT030048.2 CT030048.2 3 0.861 - 0.861 - - - - - - -
59. BX649415.4 BX649415.4 3 0.861 - 0.861 - - - - - - -
60. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 0.861 - 0.861 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
61. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 0.861 - 0.861 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
62. si:ch211-263m18.4 ENSDARG00000093353 27 0.861 - 0.861 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
63. tcf23 ENSDARG00000087381 6 0.861 - 0.861 - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
64. CR762480.3 CR762480.3 3 0.861 - 0.861 - - - - - - -
65. Mar-09 Mar-09 126 0.861 - 0.861 - - - - - - -
66. si:dkey-3d4.1 si:dkey-3d4.1 37 0.861 - 0.861 - - - - - - -
67. nitr3a_1 ENSDARG00000110676 44 0.861 - 0.861 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
68. calml4a ENSDARG00000075800 14 0.861 - 0.861 - - - - - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
69. atat1 ENSDARG00000004472 700 0.861 - 0.861 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
70. CU695076.1 CU695076.1 7 0.861 - 0.861 - - - - - - -
71. SEMA6B SEMA6B 35 0.861 - 0.861 - - - - - - -
72. ZNF648 ENSDARG00000104823 194 0.861 - 0.861 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
73. kcnj14 ENSDARG00000075914 38 0.861 - 0.861 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
74. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 0.861 - 0.861 - - - - - - - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]
75. nyx ENSDARG00000061791 2 0.861 - 0.861 - - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
76. DNAJC14 ENSDARG00000105398 20 0.861 - 0.861 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
77. chst1 ENSDARG00000088593, ENSDARG00000112011 102 0.861 - 0.861 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
78. SSX2IP SSX2IP 316 0.861 - 0.861 - - - - - - -
79. pag1 ENSDARG00000055875 21 0.861 - 0.861 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
80. igsf21b ENSDARG00000056084 6 0.861 - 0.861 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
81. si:dkey-11c5.14 si:dkey-11c5.14 15 0.861 - 0.861 - - - - - - -
82. zgc:174153 ENSDARG00000079376 12007 0.861 - 0.861 - - - - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
83. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 0.861 - 0.861 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
84. NACC1 NACC1 9 0.861 - 0.861 - - - - - - -
85. sgms2 57 0.861 - 0.861 - - - - - - - sphingomyelin synthase 2, transcript variant X1
86. ARX ARX 71 0.861 - 0.861 - - - - - - -
87. aldh1a3 ENSDARG00000076933 95 0.861 - 0.861 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
88. BX511006.2 BX511006.2 29 0.861 - 0.861 - - - - - - -
89. ccdc64 ccdc64 2 0.861 - 0.861 - - - - - - -
90. CABZ01087562.1 CABZ01087562.1 80 0.861 - 0.861 - - - - - - -
91. BTBD17 BTBD17 53 0.861 - 0.861 - - - - - - -
92. BX005305.4 ENSDARG00000114385 6 0.861 - 0.861 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
93. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 0.861 - 0.861 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
94. spred3 ENSDARG00000040358 134 0.861 - 0.861 - - - - - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
95. si:ch211-10j20.7 si:ch211-10j20.7 8 0.861 - 0.861 - - - - - - -
96. si:dkey-222f2.3 si:dkey-222f2.3 8 0.861 - 0.861 - - - - - - -
97. dusp3b ENSDARG00000060130 3 0.861 - 0.861 - - - - - - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
98. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.861 - 0.861 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
99. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 0.861 - 0.861 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
100. si:dkey-31e10.5 ENSDARG00000070502 4 0.861 - 0.861 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]

There are 855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA