Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCC2

Gene Name Gene ID Reads Annotation
SMARCC2 ENSDARG00000077946 702 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]










Genes with expression patterns similar to SMARCC2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMARCC2 ENSDARG00000077946 702 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
2. rnf44 ENSDARG00000068582 1612 2.274 - - 0.832 - - - 0.733 0.709 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
3. isoc1 ENSDARG00000060069 1621 2.171 - - - - - - 0.713 0.722 0.736 isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
4. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.643 - - - - - - - 0.808 0.835 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
5. bcl11ba ENSDARG00000062510 169 1.597 - 0.861 - - - - - - 0.736 B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
6. adora1 adora1 149 1.588 - 0.861 - - - - 0.727 - -
7. irf2bpl ENSDARG00000004297 1861 1.585 - - - - - - - 0.880 0.705 interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
8. unc13c 197 1.56 0.712 - - - - - 0.848 - - unc-13 homolog C (C. elegans)
9. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.556 - - - - - - - 0.771 0.785 T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
10. tmem198a ENSDARG00000042115 1694 1.551 - - 0.736 - - - - 0.815 - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
11. gap43 ENSDARG00000099744 4114 1.55 - - - - - - - 0.787 0.763 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
12. dpysl5a ENSDARG00000011141 1827 1.548 - 0.770 - - - - - - 0.778 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
13. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.543 - - - - - - - 0.760 0.783 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
14. atp1a3a ENSDARG00000018259 5393 1.516 - 0.758 - - - - - 0.758 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
15. C24H17orf96 C24H17orf96 1538 1.515 - - 0.777 - - - - - 0.738
16. PBLD_1 PBLD_1 585 1.494 0.709 0.785 - - - - - - -
17. tuba2 ENSDARG00000045014 1490 1.481 - - - - - - - 0.750 0.731 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
18. FAM171A2 FAM171A2 707 1.469 - 0.723 0.746 - - - - - -
19. fzd5 ENSDARG00000025420 1082 1.466 - - - - - - - 0.731 0.735 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
20. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.458 - 0.725 - - - - - - 0.733 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
21. olfm1a ENSDARG00000018270 107 1.453 0.729 - - - - - 0.724 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
22. pcdh19 ENSDARG00000034344 2378 1.443 - - - 0.712 - - - - 0.731 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
23. insm1b ENSDARG00000053301 2032 1.435 - - 0.722 - - - - - 0.713 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
24. bmi1b ENSDARG00000013076 1020 1.405 0.700 - - - - - - - 0.705 bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
25. mapk8ip2 ENSDARG00000063157 467 1 - 1.000 - - - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
26. zgc:174310 ENSDARG00000076442 112 0.972 - 0.972 - - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
27. TMEM100 TMEM100 258 0.927 - 0.927 - - - - - - -
28. lrrk2 ENSDARG00000006169 82 0.926 - 0.926 - - - - - - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
29. CABZ01026370.1 CABZ01026370.1 286 0.922 - 0.922 - - - - - - -
30. megf11 ENSDARG00000062686 230 0.921 - - - - - - 0.921 - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
31. si:dkey-262g12.3 ENSDARG00000094612 41 0.919 - 0.919 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
32. COL27A1 COL27A1 94 0.911 - 0.911 - - - - - - -
33. si:ch211-76l23.6 si:ch211-76l23.6 68 0.904 - 0.904 - - - - - - -
34. TMEM116 TMEM116 96 0.904 - 0.904 - - - - - - -
35. rtn4r ENSDARG00000090035 46 0.904 - 0.904 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
36. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.904 - 0.904 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
37. ovca2 ENSDARG00000103748 38 0.904 - 0.904 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
38. parp12a ENSDARG00000042496 82 0.904 - 0.904 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
39. nmnat2 ENSDARG00000004580 370 0.903 - 0.903 - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
40. fam20c fam20c 603 0.893 - 0.893 - - - - - - -
41. dsel dsel 96 0.892 - 0.892 - - - - - - -
42. rims3 ENSDARG00000062305 202 0.885 - - - - - - 0.885 - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
43. gdf6b ENSDARG00000005510 106 0.879 - 0.879 - - - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
44. FAM163A ENSDARG00000093021 86 0.879 - 0.879 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
45. si:dkey-97a13.9 si:dkey-97a13.9 169 0.879 - 0.879 - - - - - - -
46. gria2b ENSDARG00000052765 188 0.879 - 0.879 - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
47. nell2b ENSDARG00000062797 854 0.879 - 0.879 - - - - - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
48. FP565458.1 FP565458.1 61 0.879 - 0.879 - - - - - - -
49. jmjd4 ENSDARG00000058995 199 0.877 - 0.877 - - - - - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
50. ankrd10b ENSDARG00000004771 654 0.874 - - - - - - 0.874 - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
51. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.873 - 0.873 - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
52. dixdc1a ENSDARG00000025302 716 0.872 - 0.872 - - - - - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
53. sall3b ENSDARG00000057586 982 0.87 - 0.870 - - - - - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. CDHR2_1 CDHR2_1 12 0.865 - 0.865 - - - - - - -
55. prkrira 971 0.865 - - - - - - 0.865 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
56. RECK ENSDARG00000090039 15 0.861 - 0.861 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
57. MOV10L1 MOV10L1 21 0.861 - 0.861 - - - - - - -
58. fbxo41 ENSDARG00000078908 95 0.861 - 0.861 - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
59. U1_8 U1_8 1 0.861 - 0.861 - - - - - - -
60. syt9a ENSDARG00000003994 298 0.861 - 0.861 - - - - - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
61. lepa ENSDARG00000091085 11 0.861 - 0.861 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
62. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 0.861 - 0.861 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
63. smcr8b ENSDARG00000015803 3 0.861 - 0.861 - - - - - - - Smith-Magenis syndrome chromosome region, candidate 8b [Source:ZFIN;Acc:ZDB-GENE-061122-1]
64. chst1 ENSDARG00000088593, ENSDARG00000112011 102 0.861 - 0.861 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
65. grid2 ENSDARG00000055302, ENSDARG00000110593 1 0.861 - 0.861 - - - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
66. pappab ENSDARG00000059858 11 0.861 - 0.861 - - - - - - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
67. ggt1a ENSDARG00000023526 26 0.861 - 0.861 - - - - - - - gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
68. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 0.861 - 0.861 - - - - - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
69. BX005305.4 ENSDARG00000114385 6 0.861 - 0.861 - - - - - - - legumain [Source:NCBI gene;Acc:569153]
70. star ENSDARG00000006137 149 0.861 - 0.861 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
71. rgs5b ENSDARG00000017860 55 0.861 - 0.861 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
72. nrcam nrcam 397 0.861 - 0.861 - - - - - - -
73. akt3a_1 ENSDARG00000104810 12 0.861 - 0.861 - - - - - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
74. gdf10a ENSDARG00000095378 12 0.861 - 0.861 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
75. si:rp71-1f1.4 ENSDARG00000092476 11 0.861 - 0.861 - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
76. l3mbtl3 ENSDARG00000025983 12 0.861 - 0.861 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
77. BX571969.1 BX571969.1 8 0.861 - 0.861 - - - - - - -
78. cbx7b ENSDARG00000087181 5 0.861 - 0.861 - - - - - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
79. CT573494.2 CT573494.2 58 0.861 - 0.861 - - - - - - -
80. CABZ01085177.1 ENSDARG00000104644 6 0.861 - 0.861 - - - - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
81. zgc:92137 ENSDARG00000009443 0 0.861 - 0.861 - - - - - - - zgc:92137 [Source:ZFIN;Acc:ZDB-GENE-040801-179]
82. CR847906.1 ENSDARG00000099493 88 0.861 - 0.861 - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
83. mir301c 84 0.861 - 0.861 - - - - - - - microRNA 301c
84. si:dkey-31e10.5 ENSDARG00000070502 4 0.861 - 0.861 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
85. GRAMD3 GRAMD3 4 0.861 - 0.861 - - - - - - -
86. aldh1a3 ENSDARG00000076933 95 0.861 - 0.861 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
87. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 0.861 - 0.861 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
88. rnf213b ENSDARG00000103551 63 0.861 - 0.861 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
89. grm2a ENSDARG00000004150 64 0.861 - 0.861 - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
90. bsk146 ENSDARG00000099069 274 0.861 - 0.861 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
91. zgc:171445 ENSDARG00000115205 3 0.861 - 0.861 - - - - - - - zgc:171445 [Source:ZFIN;Acc:ZDB-GENE-080205-2]
92. si:dkey-56m15.4 si:dkey-56m15.4 39 0.861 - 0.861 - - - - - - -
93. CT867973.1 ENSDARG00000114801 13 0.861 - 0.861 - - - - - - -
94. si:ch73-269g14.1 si:ch73-269g14.1 0 0.861 - 0.861 - - - - - - -
95. zmiz2 ENSDARG00000098683 1 0.861 - 0.861 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
96. CABZ01074423.1 CABZ01074423.1 8 0.861 - 0.861 - - - - - - -
97. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 0.861 - 0.861 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
98. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 0.861 - 0.861 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
99. TENM2 ENSDARG00000037122 48 0.861 - 0.861 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
100. CR556708.1 ENSDARG00000100565 6 0.861 - 0.861 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]

There are 855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA