Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCC2

Gene Name Gene ID Reads Annotation
SMARCC2 ENSDARG00000077946 702 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]










Genes with expression patterns similar to SMARCC2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMARCC2 ENSDARG00000077946 702 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
2. rnf44 ENSDARG00000068582 1612 2.274 - - 0.832 - - - 0.733 0.709 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
3. isoc1 ENSDARG00000060069 1621 2.171 - - - - - - 0.713 0.722 0.736 isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
4. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.643 - - - - - - - 0.808 0.835 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
5. bcl11ba ENSDARG00000062510 169 1.597 - 0.861 - - - - - - 0.736 B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
6. adora1 adora1 149 1.588 - 0.861 - - - - 0.727 - -
7. irf2bpl ENSDARG00000004297 1861 1.585 - - - - - - - 0.880 0.705 interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
8. unc13c 197 1.56 0.712 - - - - - 0.848 - - unc-13 homolog C (C. elegans)
9. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.556 - - - - - - - 0.771 0.785 T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
10. tmem198a ENSDARG00000042115 1694 1.551 - - 0.736 - - - - 0.815 - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
11. gap43 ENSDARG00000099744 4114 1.55 - - - - - - - 0.787 0.763 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
12. dpysl5a ENSDARG00000011141 1827 1.548 - 0.770 - - - - - - 0.778 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
13. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.543 - - - - - - - 0.760 0.783 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
14. atp1a3a ENSDARG00000018259 5393 1.516 - 0.758 - - - - - 0.758 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
15. C24H17orf96 C24H17orf96 1538 1.515 - - 0.777 - - - - - 0.738
16. PBLD_1 PBLD_1 585 1.494 0.709 0.785 - - - - - - -
17. tuba2 ENSDARG00000045014 1490 1.481 - - - - - - - 0.750 0.731 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
18. FAM171A2 FAM171A2 707 1.469 - 0.723 0.746 - - - - - -
19. fzd5 ENSDARG00000025420 1082 1.466 - - - - - - - 0.731 0.735 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
20. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.458 - 0.725 - - - - - - 0.733 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
21. olfm1a ENSDARG00000018270 107 1.453 0.729 - - - - - 0.724 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
22. pcdh19 ENSDARG00000034344 2378 1.443 - - - 0.712 - - - - 0.731 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
23. insm1b ENSDARG00000053301 2032 1.435 - - 0.722 - - - - - 0.713 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
24. bmi1b ENSDARG00000013076 1020 1.405 0.700 - - - - - - - 0.705 bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
25. mapk8ip2 ENSDARG00000063157 467 1 - 1.000 - - - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
26. zgc:174310 ENSDARG00000076442 112 0.972 - 0.972 - - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
27. TMEM100 TMEM100 258 0.927 - 0.927 - - - - - - -
28. lrrk2 ENSDARG00000006169 82 0.926 - 0.926 - - - - - - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
29. CABZ01026370.1 CABZ01026370.1 286 0.922 - 0.922 - - - - - - -
30. megf11 ENSDARG00000062686 230 0.921 - - - - - - 0.921 - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
31. si:dkey-262g12.3 ENSDARG00000094612 41 0.919 - 0.919 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
32. COL27A1 COL27A1 94 0.911 - 0.911 - - - - - - -
33. ovca2 ENSDARG00000103748 38 0.904 - 0.904 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
34. parp12a ENSDARG00000042496 82 0.904 - 0.904 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
35. TMEM116 TMEM116 96 0.904 - 0.904 - - - - - - -
36. si:ch211-76l23.6 si:ch211-76l23.6 68 0.904 - 0.904 - - - - - - -
37. rtn4r ENSDARG00000090035 46 0.904 - 0.904 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
38. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.904 - 0.904 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
39. nmnat2 ENSDARG00000004580 370 0.903 - 0.903 - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
40. fam20c fam20c 603 0.893 - 0.893 - - - - - - -
41. dsel dsel 96 0.892 - 0.892 - - - - - - -
42. rims3 ENSDARG00000062305 202 0.885 - - - - - - 0.885 - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
43. nell2b ENSDARG00000062797 854 0.879 - 0.879 - - - - - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
44. FP565458.1 FP565458.1 61 0.879 - 0.879 - - - - - - -
45. gdf6b ENSDARG00000005510 106 0.879 - 0.879 - - - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
46. FAM163A ENSDARG00000093021 86 0.879 - 0.879 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
47. si:dkey-97a13.9 si:dkey-97a13.9 169 0.879 - 0.879 - - - - - - -
48. gria2b ENSDARG00000052765 188 0.879 - 0.879 - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
49. jmjd4 ENSDARG00000058995 199 0.877 - 0.877 - - - - - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
50. ankrd10b ENSDARG00000004771 654 0.874 - - - - - - 0.874 - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
51. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.873 - 0.873 - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
52. dixdc1a ENSDARG00000025302 716 0.872 - 0.872 - - - - - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
53. sall3b ENSDARG00000057586 982 0.87 - 0.870 - - - - - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. prkrira 971 0.865 - - - - - - 0.865 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
55. CDHR2_1 CDHR2_1 12 0.865 - 0.865 - - - - - - -
56. BX548021.2 BX548021.2 4 0.861 - 0.861 - - - - - - -
57. si:dkey-191j3.2 ENSDARG00000101997 1 0.861 - 0.861 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
58. si:ch211-10j20.7 si:ch211-10j20.7 8 0.861 - 0.861 - - - - - - -
59. galnt13 ENSDARG00000099227 1059 0.861 - 0.861 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
60. CABZ01065506.1 CABZ01065506.1 204 0.861 - 0.861 - - - - - - -
61. BX649497.1 BX649497.1 0 0.861 - 0.861 - - - - - - -
62. si:ch73-27e22.7 ENSDARG00000093345 2 0.861 - 0.861 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
63. thada ENSDARG00000053082, ENSDARG00000112761 2 0.861 - 0.861 - - - - - - - thyroid adenoma associated [Source:ZFIN;Acc:ZDB-GENE-050320-49]
64. zgc:194665 ENSDARG00000004577 136 0.861 - 0.861 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
65. si:ch211-57f7.7 ENSDARG00000093131 8 0.861 - 0.861 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
66. BX000430.1 ENSDARG00000112057 135 0.861 - 0.861 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
67. BX649415.4 BX649415.4 3 0.861 - 0.861 - - - - - - -
68. SSBP2 ENSDARG00000099727 22 0.861 - 0.861 - - - - - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
69. CU928854.1 CU928854.1 3 0.861 - 0.861 - - - - - - -
70. zgc:77112 ENSDARG00000015657 24 0.861 - 0.861 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
71. CABZ01038313.1 CABZ01038313.1 79 0.861 - 0.861 - - - - - - -
72. lzts1 ENSDARG00000075565 23 0.861 - 0.861 - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
73. vwc2 ENSDARG00000076495 22 0.861 - 0.861 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
74. CMA1_11 CMA1_11 0 0.861 - 0.861 - - - - - - -
75. si:dkey-287f10.2 si:dkey-287f10.2 3 0.861 - 0.861 - - - - - - -
76. igsf21b ENSDARG00000056084 6 0.861 - 0.861 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
77. si:dkey-11c5.14 si:dkey-11c5.14 15 0.861 - 0.861 - - - - - - -
78. slc2a15b ENSDARG00000053269 899 0.861 - 0.861 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
79. si:ch73-290k24.5 ENSDARG00000076310 39 0.861 - 0.861 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
80. camta1a ENSDARG00000077428, ENSDARG00000116922 176 0.861 - 0.861 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
81. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 0.861 - 0.861 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
82. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.861 - 0.861 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
83. CU695076.1 CU695076.1 7 0.861 - 0.861 - - - - - - -
84. dnajb2 ENSDARG00000058644 30 0.861 - 0.861 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
85. XKR7 ENSDARG00000026333 175 0.861 - 0.861 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
86. si:ch73-49p17.1 69 0.861 - 0.861 - - - - - - - si:ch73-49p17.1
87. CABZ01087562.1 CABZ01087562.1 80 0.861 - 0.861 - - - - - - -
88. si:ch211-237c9.3 si:ch211-237c9.3 17 0.861 - 0.861 - - - - - - -
89. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 0.861 - 0.861 - - - - - - -
90. BX511006.2 BX511006.2 29 0.861 - 0.861 - - - - - - -
91. GRIK1 GRIK1 1 0.861 - 0.861 - - - - - - -
92. fabp10a ENSDARG00000038439 4 0.861 - 0.861 - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
93. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.861 - 0.861 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
94. CU694254.1 CU694254.1 4 0.861 - 0.861 - - - - - - -
95. cdx1b ENSDARG00000116139 113 0.861 - 0.861 - - - - - - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
96. si:ch211-113a14.26_3 6 0.861 - 0.861 - - - - - - - si:ch211-113a14.26
97. cldnj ENSDARG00000058880 59 0.861 - 0.861 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
98. tyro3 ENSDARG00000005356 4 0.861 - 0.861 - - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
99. c3c c3c 174 0.861 - 0.861 - - - - - - -
100. si:ch211-213i16.4 8 0.861 - 0.861 - - - - - - - si:ch211-213i16.4, transcript variant X1

There are 855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA