Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCC2

Gene Name Gene ID Reads Annotation
SMARCC2 ENSDARG00000077946 702 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]










Genes with expression patterns similar to SMARCC2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMARCC2 ENSDARG00000077946 702 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
2. rnf44 ENSDARG00000068582 1612 2.274 - - 0.832 - - - 0.733 0.709 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
3. isoc1 ENSDARG00000060069 1621 2.171 - - - - - - 0.713 0.722 0.736 isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
4. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.643 - - - - - - - 0.808 0.835 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
5. bcl11ba ENSDARG00000062510 169 1.597 - 0.861 - - - - - - 0.736 B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
6. adora1 adora1 149 1.588 - 0.861 - - - - 0.727 - -
7. irf2bpl ENSDARG00000004297 1861 1.585 - - - - - - - 0.880 0.705 interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
8. unc13c 197 1.56 0.712 - - - - - 0.848 - - unc-13 homolog C (C. elegans)
9. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.556 - - - - - - - 0.771 0.785 T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
10. tmem198a ENSDARG00000042115 1694 1.551 - - 0.736 - - - - 0.815 - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
11. gap43 ENSDARG00000099744 4114 1.55 - - - - - - - 0.787 0.763 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
12. dpysl5a ENSDARG00000011141 1827 1.548 - 0.770 - - - - - - 0.778 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
13. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.543 - - - - - - - 0.760 0.783 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
14. atp1a3a ENSDARG00000018259 5393 1.516 - 0.758 - - - - - 0.758 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
15. C24H17orf96 C24H17orf96 1538 1.515 - - 0.777 - - - - - 0.738
16. PBLD_1 PBLD_1 585 1.494 0.709 0.785 - - - - - - -
17. tuba2 ENSDARG00000045014 1490 1.481 - - - - - - - 0.750 0.731 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
18. FAM171A2 FAM171A2 707 1.469 - 0.723 0.746 - - - - - -
19. fzd5 ENSDARG00000025420 1082 1.466 - - - - - - - 0.731 0.735 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
20. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.458 - 0.725 - - - - - - 0.733 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
21. olfm1a ENSDARG00000018270 107 1.453 0.729 - - - - - 0.724 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
22. pcdh19 ENSDARG00000034344 2378 1.443 - - - 0.712 - - - - 0.731 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
23. insm1b ENSDARG00000053301 2032 1.435 - - 0.722 - - - - - 0.713 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
24. bmi1b ENSDARG00000013076 1020 1.405 0.700 - - - - - - - 0.705 bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
25. mapk8ip2 ENSDARG00000063157 467 1 - 1.000 - - - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
26. zgc:174310 ENSDARG00000076442 112 0.972 - 0.972 - - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
27. TMEM100 TMEM100 258 0.927 - 0.927 - - - - - - -
28. lrrk2 ENSDARG00000006169 82 0.926 - 0.926 - - - - - - - leucine-rich repeat kinase 2 [Source:ZFIN;Acc:ZDB-GENE-071218-6]
29. CABZ01026370.1 CABZ01026370.1 286 0.922 - 0.922 - - - - - - -
30. megf11 ENSDARG00000062686 230 0.921 - - - - - - 0.921 - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
31. si:dkey-262g12.3 ENSDARG00000094612 41 0.919 - 0.919 - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
32. COL27A1 COL27A1 94 0.911 - 0.911 - - - - - - -
33. si:ch211-76l23.6 si:ch211-76l23.6 68 0.904 - 0.904 - - - - - - -
34. rtn4r ENSDARG00000090035 46 0.904 - 0.904 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
35. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.904 - 0.904 - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
36. TMEM116 TMEM116 96 0.904 - 0.904 - - - - - - -
37. parp12a ENSDARG00000042496 82 0.904 - 0.904 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
38. ovca2 ENSDARG00000103748 38 0.904 - 0.904 - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
39. nmnat2 ENSDARG00000004580 370 0.903 - 0.903 - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
40. fam20c fam20c 603 0.893 - 0.893 - - - - - - -
41. dsel dsel 96 0.892 - 0.892 - - - - - - -
42. rims3 ENSDARG00000062305 202 0.885 - - - - - - 0.885 - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
43. FP565458.1 FP565458.1 61 0.879 - 0.879 - - - - - - -
44. nell2b ENSDARG00000062797 854 0.879 - 0.879 - - - - - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
45. si:dkey-97a13.9 si:dkey-97a13.9 169 0.879 - 0.879 - - - - - - -
46. gria2b ENSDARG00000052765 188 0.879 - 0.879 - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
47. FAM163A ENSDARG00000093021 86 0.879 - 0.879 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
48. gdf6b ENSDARG00000005510 106 0.879 - 0.879 - - - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
49. jmjd4 ENSDARG00000058995 199 0.877 - 0.877 - - - - - - - jumonji domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-636]
50. ankrd10b ENSDARG00000004771 654 0.874 - - - - - - 0.874 - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
51. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.873 - 0.873 - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
52. dixdc1a ENSDARG00000025302 716 0.872 - 0.872 - - - - - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
53. sall3b ENSDARG00000057586 982 0.87 - 0.870 - - - - - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. prkrira 971 0.865 - - - - - - 0.865 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
55. CDHR2_1 CDHR2_1 12 0.865 - 0.865 - - - - - - -
56. si:dkey-3d4.1 si:dkey-3d4.1 37 0.861 - 0.861 - - - - - - -
57. BX936303.1 ENSDARG00000103105 26 0.861 - 0.861 - - - - - - -
58. GRIK1 GRIK1 1 0.861 - 0.861 - - - - - - -
59. ccdc64 ccdc64 2 0.861 - 0.861 - - - - - - -
60. si:dkey-103i16.2 si:dkey-103i16.2 492 0.861 - 0.861 - - - - - - -
61. BX649497.1 BX649497.1 0 0.861 - 0.861 - - - - - - -
62. nyx ENSDARG00000061791 2 0.861 - 0.861 - - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
63. lepa ENSDARG00000091085 11 0.861 - 0.861 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
64. camta1a ENSDARG00000077428, ENSDARG00000116922 176 0.861 - 0.861 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
65. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 0.861 - 0.861 - - - - - - -
66. ppp1r3db ENSDARG00000076248 32 0.861 - 0.861 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
67. SGSM1 SGSM1 254 0.861 - 0.861 - - - - - - -
68. si:dkeyp-33c10.5 11 0.861 - 0.861 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
69. zgc:77112 ENSDARG00000015657 24 0.861 - 0.861 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
70. CR762480.3 CR762480.3 3 0.861 - 0.861 - - - - - - -
71. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 0.861 - 0.861 - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
72. rab14l ENSDARG00000035188 18 0.861 - 0.861 - - - - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
73. nitr3a_1 ENSDARG00000110676 44 0.861 - 0.861 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
74. evlb ENSDARG00000099720 245 0.861 - 0.861 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
75. MSRA ENSDARG00000029587 30 0.861 - 0.861 - - - - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
76. si:ch211-232k18.2 si:ch211-232k18.2 2 0.861 - 0.861 - - - - - - -
77. ME1 ENSDARG00000053215 8 0.861 - 0.861 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
78. ftr76 ENSDARG00000076093 1 0.861 - 0.861 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
79. zbtb20 ENSDARG00000005586 195 0.861 - - - - - - 0.861 - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
80. gdf10a ENSDARG00000095378 12 0.861 - 0.861 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
81. si:ch73-91k6.8 si:ch73-91k6.8 37 0.861 - 0.861 - - - - - - -
82. igsf21b ENSDARG00000056084 6 0.861 - 0.861 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
83. pcsk5a ENSDARG00000067537 44 0.861 - 0.861 - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
84. RGS9BP ENSDARG00000086756 65 0.861 - 0.861 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
85. syt9a ENSDARG00000003994 298 0.861 - 0.861 - - - - - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
86. thada ENSDARG00000053082, ENSDARG00000112761 2 0.861 - 0.861 - - - - - - - thyroid adenoma associated [Source:ZFIN;Acc:ZDB-GENE-050320-49]
87. klhl6 ENSDARG00000026990 24 0.861 - 0.861 - - - - - - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
88. si:dkey-21o19.6 si:dkey-21o19.6 18 0.861 - 0.861 - - - - - - -
89. fbxo41 ENSDARG00000078908 95 0.861 - 0.861 - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
90. tnfaip8l2a ENSDARG00000075592 90 0.861 - 0.861 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
91. foxg1d ENSDARG00000070053 32 0.861 - 0.861 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
92. si:ch211-57f7.7 ENSDARG00000093131 8 0.861 - 0.861 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
93. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 0.861 - 0.861 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
94. SSX2IP SSX2IP 316 0.861 - 0.861 - - - - - - -
95. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.861 - 0.861 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
96. si:ch211-214p13.3 ENSDARG00000087403 0 0.861 - 0.861 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
97. l3mbtl3 ENSDARG00000025983 12 0.861 - 0.861 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
98. PPFIA3 ENSDARG00000077053 310 0.861 - 0.861 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
99. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 0.861 - 0.861 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
100. rhobtb2b ENSDARG00000089340 4 0.861 - 0.861 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]

There are 855 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA