Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCA1

Gene Name Gene ID Reads Annotation
SMARCA1 ENSGALG00000008431 4000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]











Genes with expression patterns similar to SMARCA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMARCA1 ENSGALG00000008431 4000 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
2. CCNC ENSGALG00000015471 6497 1.526 - - - - - - 0.769 - 0.757 - cyclin C [Source:NCBI gene;Acc:421791]
3. SALL4 ENSGALG00000041365 6760 1.503 - - - - - - 0.701 0.802 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
4. MED17 ENSGALG00000017218 5821 1.498 - - - - - - 0.754 0.744 - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
5. FIGNL1 ENSGALG00000026363 2194 1.497 - - - - - - 0.705 - - 0.792 fidgetin like 1, transcript variant X2
6. DCXR ENSGALG00000002849 5390 1.49 - - - - - - 0.726 0.764 - - dicarbonyl and L-xylulose reductase [Source:NCBI gene;Acc:374066]
7. FBXO3 ENSGALG00000034029 15089 1.482 - - - - - - 0.755 0.727 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
8. PLEKHB2 ENSGALG00000002169 3832 1.481 - - - - - - 0.709 0.772 - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
9. MRPL46 ENSGALG00000006782 5033 1.472 - - - - - - 0.712 - 0.760 - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
10. UBFD1 ENSGALG00000006117 5242 1.466 - - - - - - 0.750 - 0.716 - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
11. POP5 ENSGALG00000007124 10365 1.464 - - - - - - 0.756 0.708 - - POP5 homolog, ribonuclease P/MRP subunit [Source:HGNC Symbol;Acc:HGNC:17689]
12. PTGFRN ENSGALG00000015464 14584 1.461 - - - - - - 0.738 0.723 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
13. CNI CNI 18453 1.435 - - - - - - 0.735 0.700 - -
14. DARS2 ENSGALG00000023749 2386 1.427 - - - - - - 0.723 0.704 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
15. RARS ENSGALG00000001850 23283 1.414 - - - - - - 0.711 0.703 - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
16. WBP1L ENSGALG00000041010 3681 0.868 - - - - - - - 0.868 - - WW domain binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:23510]
17. CXorf30 CXorf30 172 0.866 - - - - - - - - - 0.866
18. NEK6 ENSGALG00000001118 20333 0.866 - - - - - - 0.866 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
19. MOCS1 ENSGALG00000010051 70 0.864 - - - - - - - - - 0.864 molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
20. DSTYK ENSGALG00000041123 12 0.859 - - - - - - - - - 0.859 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
21. DRAM1 ENSGALG00000012761 53 0.859 - - - - - - - - - 0.859 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
22. SIDT1 ENSGALG00000014812 20 0.859 - - - - - - - - - 0.859 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
23. CNTNAP4 ENSGALG00000023179 13 0.859 - - - - - - - - - 0.859 contactin associated protein like 4
24. PSTPIP1 ENSGALG00000002786 9 0.859 - - - - - - - - - 0.859 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
25. TRH ENSGALG00000008490 16 0.859 - - - - - - - - - 0.859 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
26. NAGPA 5 0.859 - - - - - - - - - 0.859 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, transcript variant X5
27. CCR4 ENSGALG00000039146 20 0.859 - - - - - - - - - 0.859 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
28. PNMT ENSGALG00000027281 14 0.858 - - - - - - - - - 0.858 phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
29. MUC6 ENSGALG00000040530 11 0.856 - - - - - - - - - 0.856 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
30. ARL15 ENSGALG00000014911 13 0.856 - - - - - - - - - 0.856 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
31. FBXL4 ENSGALG00000015490 12 0.854 - - - - - - - - - 0.854 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
32. PPP2R5A ENSGALG00000009828 10309 0.849 - - - - - - - 0.849 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
33. CALML4 ENSGALG00000007979 6395 0.847 - - - - - - - 0.847 - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
34. NOC4L ENSGALG00000002272 9644 0.847 - - - - - - 0.847 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
35. ENSGALG00000020700 ENSGALG00000020700 44 0.844 - - - - - - - - - 0.844
36. C5 ENSGALG00000001565 142 0.844 - - - - - - - - - 0.844 complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
37. ENSGALG00000026925 ENSGALG00000026925 119 0.843 - - - - - - - - - 0.843
38. SNTG2 ENSGALG00000016367 42 0.843 - - - - - - - - - 0.843 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
39. ENSGALG00000002020 ENSGALG00000002020 183 0.842 - - - - - - - - - 0.842
40. IKBIP ENSGALG00000026284 31 0.842 - - - - - - - - - 0.842 IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
41. ZDHHC20 ENSGALG00000017126 58 0.841 - - - - - - - - - 0.841 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
42. ISOC1 ENSGALG00000000161 46 0.841 - - - - - - - - - 0.841 isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
43. EIF2B5 ENSGALG00000008376 36 0.841 - - - - - - - - - 0.841 eukaryotic translation initiation factor 2B subunit epsilon [Source:HGNC Symbol;Acc:HGNC:3261]
44. ATHL1 ATHL1 16 0.84 - - - - - - - - - 0.840
45. PCDH12 ENSGALG00000002544 36 0.839 - - - - - - - - - 0.839 protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
46. AZI2 ENSGALG00000011428 24 0.836 - - - - - - - - - 0.836 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
47. QSOX1 ENSGALG00000003933 184 0.836 - - - - - - - - - 0.836 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
48. WDR43 ENSGALG00000032529 12235 0.834 - - - - - - 0.834 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
49. TAX1BP1 ENSGALG00000042822 7728 0.833 - - - - - - 0.833 - - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
50. BLM ENSGALG00000008256 6160 0.833 - - - - - - - 0.833 - - Bloom syndrome RecQ like helicase [Source:NCBI gene;Acc:415577]
51. ENSGALG00000016601 ENSGALG00000016601 16 0.831 - - - - - - - - - 0.831
52. GGA.31975 GGA.31975 8825 0.831 - - - - - - 0.831 - - -
53. GPRC5C ENSGALG00000021362 3712 0.831 - - - - - - - 0.831 - - G protein-coupled receptor class C group 5 member C [Source:HGNC Symbol;Acc:HGNC:13309]
54. NUP50 ENSGALG00000014222 11743 0.831 - - - - - - 0.831 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
55. TOR1A ENSGALG00000004165 4487 0.83 - - - - - - - 0.830 - - torsin family 1 member A [Source:NCBI gene;Acc:417190]
56. ENSGALG00000000346 ENSGALG00000000346 130 0.83 - - - - - - - - - 0.830
57. AP2A2 ENSGALG00000006799 13874 0.829 - - - - - - 0.829 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
58. LGALS3 ENSGALG00000012173 3306 0.829 - - - - - - - 0.829 - - galectin 3 [Source:NCBI gene;Acc:373917]
59. NOB1 ENSGALG00000000693 15442 0.828 - - - - - - - 0.828 - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
60. SH3RF1 ENSGALG00000009692 46 0.828 - - - - - - - - - 0.828 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
61. HSPA4 ENSGALG00000040882 20966 0.826 - - - - - - 0.826 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
62. SAPCD2 12 0.824 - - - - - - - - - 0.824 suppressor APC domain containing 2, transcript variant X1
63. PSMC3 ENSGALG00000008108 22922 0.824 - - - - - - 0.824 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
64. OPA1 ENSGALG00000007150 5488 0.824 - - - - - - 0.824 - - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
65. NCALD ENSGALG00000032518 42 0.821 - - - - - - - - - 0.821 neurocalcin delta [Source:NCBI gene;Acc:396048]
66. ALDH7A1 ENSGALG00000008229 5891 0.821 - - - - - - - 0.821 - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
67. TPD52 ENSGALG00000040167 9891 0.82 - - - - - - 0.820 - - - tumor protein D52 [Source:NCBI gene;Acc:770339]
68. NASP ENSGALG00000010255 28423 0.82 - - - - - - 0.820 - - - nuclear autoantigenic sperm protein, transcript variant X3
69. ATR ENSGALG00000002663 4626 0.82 - - - - - - 0.820 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
70. CCDC135 CCDC135 220 0.82 - - - - - - - - - 0.820
71. DPYS ENSGALG00000039011 54 0.819 - - - - - - - - - 0.819 dihydropyrimidinase [Source:NCBI gene;Acc:420266]
72. TRERF1 ENSGALG00000009896 42 0.819 - - - - - - - - - 0.819 transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
73. EXTL2 ENSGALG00000027984 808 0.819 - - - - - - - - - 0.819 exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
74. HIPK2 ENSGALG00000012792 7191 0.818 - - - - - - - 0.818 - - homeodomain interacting protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14402]
75. COMMD6 ENSGALG00000016922 24 0.818 - - - - - - - - - 0.818 COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
76. RPAP2 ENSGALG00000005953 2085 0.818 - - - - - - - - - 0.818 RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
77. SAR1B ENSGALG00000038753 6493 0.817 - - - - - - 0.817 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
78. CRLS1 ENSGALG00000009214 8652 0.817 - - - - - - 0.817 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
79. EFNA5 ENSGALG00000000280 308 0.817 - - - - - - - - - 0.817 ephrin A5 [Source:NCBI gene;Acc:396100]
80. RAB3B ENSGALG00000010567 894 0.816 - - - - - - - - - 0.816 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
81. N-RAS N-RAS 5787 0.815 - - - - - - 0.815 - - -
82. HERC2 ENSGALG00000016739 9900 0.815 - - - - - - 0.815 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
83. AHCTF1 ENSGALG00000010630 4809 0.814 - - - - - - 0.814 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
84. CASK ENSGALG00000042400 8485 0.812 - - - - - - 0.812 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
85. BET1L ENSGALG00000004172 5305 0.811 - - - - - - 0.811 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
86. PSMD6 ENSGALG00000007315 3906 0.811 - - - - - - - 0.811 - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
87. MYCT1 ENSGALG00000013603 44 0.81 - - - - - - - - - 0.810 MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
88. M6PR ENSGALG00000031681 9442 0.81 - - - - - - - 0.810 - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
89. PLRG1 ENSGALG00000009257 8613 0.809 - - - - - - 0.809 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
90. CYB5R2 ENSGALG00000032372 7967 0.808 - - - - - - 0.808 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
91. ZYX ENSGALG00000014688 8686 0.808 - - - - - - - 0.808 - - zyxin [Source:NCBI gene;Acc:418300]
92. OLFML2A ENSGALG00000001048 1329 0.808 - - - - - - - 0.808 - - olfactomedin like 2A [Source:HGNC Symbol;Acc:HGNC:27270]
93. ENPP6 ENSGALG00000010645 272 0.807 - - - - - - - 0.807 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
94. APAF1 ENSGALG00000011531 3102 0.807 - - - - - - 0.807 - - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
95. MYOF ENSGALG00000006705 793 0.806 - - - - - - - - - 0.806 myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
96. ENSGALG00000020877 ENSGALG00000020877 36 0.805 - - - - - - - - - 0.805
97. RAB2A ENSGALG00000015450 990 0.805 - - - - - - - - - 0.805 RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
98. DGUOK ENSGALG00000005961 5929 0.805 - - - - - - - 0.805 - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]
99. TXNDC17 ENSGALG00000027950 45004 0.805 - - - - - - 0.805 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
100. ATG3 ENSGALG00000015204 11277 0.805 - - - - - - 0.805 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]

There are 550 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA