Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMAD9

Gene Name Gene ID Reads Annotation
SMAD9 ENSGALG00000017050 11 SMAD family member 9 [Source:NCBI gene;Acc:395543]











Genes with expression patterns similar to SMAD9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMAD9 ENSGALG00000017050 11 6 - - 1.000 1.000 - 1.000 1.000 1.000 - 1.000 SMAD family member 9 [Source:NCBI gene;Acc:395543]
2. SGIP1 ENSGALG00000011113 20 1.906 - - - - - 0.972 - 0.934 - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
3. CDKL5 ENSGALG00000016529 26 1.823 - - - - - 0.823 1.000 - - - cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
4. ABCB11 ENSGALG00000010891 24 1.807 - - - 0.829 - - - 0.978 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
5. IL2RG ENSGALG00000005638 21 1.75 - - - - - 1.000 0.750 - - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
6. ENSGALG00000011273 ENSGALG00000011273 9 1.75 - - - 0.942 - - - 0.808 - -
7. IRF-4 IRF-4 19 1.749 - - - - - - 1.000 - - 0.749
8. TRPA1 ENSGALG00000034751 148 1.741 - - - - - - - 0.968 - 0.773 Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
9. CACNA1C ENSGALG00000013022 322 1.738 - - - - - - 1.000 0.738 - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
10. LPGAT1 ENSGALG00000009848 33 1.722 - - 0.780 0.942 - - - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
11. RAX1 RAX1 44 1.634 - - - 0.809 - 0.825 - - - -
12. NEU2 ENSGALG00000037467 34 1.565 - - 0.750 - - - - 0.815 - - neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
13. HOGA1 ENSGALG00000006134 25 1 - - - - - 1.000 - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
14. gga-let-7d ENSGALG00000018264 1 1 - - - - - - - - - 1.000 gga-let-7d [Source:miRBase;Acc:MI0001232]
15. ENSGALG00000004635 ENSGALG00000004635 2 1 - - - - - - - - - 1.000
16. MED12 ENSGALG00000036322 814 1 - - - - - - 1.000 - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
17. CASZ1 ENSGALG00000002888 2 1 - - - - - - - - - 1.000 castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
18. ST8SIA6 ENSGALG00000008671 8 1 - - - - - 1.000 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
19. MCOLN3 ENSGALG00000008709 21 1 - - - - - - 1.000 - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
20. AMH ENSGALG00000036346 16 1 - - - - - 1.000 - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
21. SEC61A1 ENSGALG00000005966 9 1 - - - - - 1.000 - - - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
22. ADRA2C ENSGALG00000015608 42 1 - - - - - - - 1.000 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
23. NR4A3 ENSGALG00000013568 1 1 - - - - - - 1.000 - - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
24. CITED2 ENSGALG00000013818 4 1 - - - - - - - - - 1.000 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
25. SLCO1B1 ENSGALG00000019276 7 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
26. gga-mir-92-2 ENSGALG00000025998 2 1 - - - - - 1.000 - - - - gga-mir-92-2 [Source:miRBase;Acc:MI0029335]
27. NTN1 ENSGALG00000023626 12 1 - - - - - - 1.000 - - - netrin 1 [Source:NCBI gene;Acc:396389]
28. ENSGALG00000018376 ENSGALG00000018376 11 1 - - - - - - - - - 1.000
29. ENSGALG00000005498 ENSGALG00000005498 11 1 - - - - - 1.000 - - - -
30. RAB37 ENSGALG00000027789 17 1 - - - - - - 1.000 - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
31. ENSGALG00000025765 ENSGALG00000025765 1 1 - - - - - - 1.000 - - -
32. BTBD6 ENSGALG00000033813 163 1 - - - - - - 1.000 - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
33. LVRN ENSGALG00000002318 14 1 - - - - - - 1.000 - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
34. ENSGALG00000007135 ENSGALG00000007135 3 1 - - - - - - - - - 1.000
35. AIRE AIRE 3 1 - - - - - - - - - 1.000
36. OCSTAMP ENSGALG00000044719 10 1 - - - - - - 1.000 - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
37. SLC18A2 ENSGALG00000009289 11 1 - - - - - - - - - 1.000 solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
38. KPNA7 ENSGALG00000004665 1 1 - - - - - - - - - 1.000 karyopherin subunit alpha 7 [Source:HGNC Symbol;Acc:HGNC:21839]
39. MKNK2 ENSGALG00000003845 1 1 - - - - - 1.000 - - - - MAP kinase interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:7111]
40. TEX14 ENSGALG00000005037 3 1 - - - - - - - - - 1.000 testis expressed 14, intercellular bridge forming factor [Source:HGNC Symbol;Acc:HGNC:11737]
41. RNF169 ENSGALG00000017309 8 1 - - - - - 1.000 - - - - ring finger protein 169 [Source:HGNC Symbol;Acc:HGNC:26961]
42. RHCG ENSGALG00000006635 7 1 - - - - - 1.000 - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
43. FAM3D ENSGALG00000007152 4 1 - - - - - 1.000 - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
44. TNFRSF6B ENSGALG00000006106 12 1 - - - - - - 1.000 - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
45. CRLF1 ENSGALG00000026146 1 1 - - - - - - 1.000 - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
46. SOX30 ENSGALG00000045860 5 1 - - 1.000 - - - - - - - SRY-box 30 [Source:HGNC Symbol;Acc:HGNC:30635]
47. RASSF7 ENSGALG00000044251 8 1 - - - - - 1.000 - - - - Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
48. COL15A1 ENSGALG00000034119 9 1 - - - - - 1.000 - - - - collagen type XV alpha 1 chain, transcript variant X6
49. FGFBP2 ENSGALG00000014501 12 1 - - - - - 1.000 - - - - fibroblast growth factor binding protein 2 [Source:NCBI gene;Acc:395094]
50. GRIN2A ENSGALG00000007278 17 1 - - - - - - - - - 1.000 glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
51. HSD17B14 ENSGALG00000007727 3 1 - - - - - 1.000 - - - - hydroxysteroid 17-beta dehydrogenase 14
52. APOPT1 ENSGALG00000044519 193 1 - - - - - - 1.000 - - - apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
53. ENSGALG00000009953 ENSGALG00000009953 5 1 - - - - - 1.000 - - - -
54. ENSGALG00000002290 ENSGALG00000002290 6 1 - - - - - - - - - 1.000
55. MARCO ENSGALG00000012119 5 1 - - 1.000 - - - - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
56. SNORD103 SNORD103 25 1 - - - - - - 1.000 - - -
57. RSPH1 ENSGALG00000043976 6 1 - - - - - 1.000 - - - - radial spoke head component 1 [Source:HGNC Symbol;Acc:HGNC:12371]
58. ADRB3 1 1 - - - - - 1.000 - - - - adrenoceptor beta 3
59. ENSGALG00000009041 ENSGALG00000009041 27 1 - - - - - - - - - 1.000
60. SLC6A6 ENSGALG00000006425 31 1 - - - - - - 1.000 - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
61. SLC12A5 ENSGALG00000042199 1 1 - - - - - - 1.000 - - - solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
62. MYO19 9 1 - - - - - - 1.000 - - - myosin XIX, transcript variant X5
63. RBM15 ENSGALG00000000401 22 1 - - - - - - 1.000 - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
64. KLHL30 ENSGALG00000006260 32 1 - - - - - - 1.000 - - - kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
65. CSF2RA ENSGALG00000016693 5 1 - - - - - 1.000 - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
66. gga-mir-6641 ENSGALG00000028818 1 1 - - - - - 1.000 - - - - gga-mir-6641 [Source:miRBase;Acc:MI0022460]
67. ZNF469 ENSGALG00000026534 8 1 - - - - - - 1.000 - - - zinc finger protein 469, transcript variant X3
68. ENSGALG00000008594 ENSGALG00000008594 54 1 - - - - - 1.000 - - - -
69. CFI ENSGALG00000012126 20 1 - - - - - - 1.000 - - - complement factor I [Source:NCBI gene;Acc:428773]
70. FAM71D ENSGALG00000043908 2 1 - - - - - - - - - 1.000 family with sequence similarity 71, member D
71. RAB11FIP1 41 1 - - - - - - 1.000 - - - RAB11 family interacting protein 1, transcript variant X2
72. DUPD1 ENSGALG00000005019 18 1 - - - - - 1.000 - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
73. ENSGALG00000003440 ENSGALG00000003440 42 1 - - - - - 1.000 - - - -
74. ZDHHC16 ENSGALG00000007592 19 1 - - - - - - 1.000 - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
75. CA13 ENSGALG00000033428 1 1 - - - - - - 1.000 - - - carbonic anhydrase 13 [Source:HGNC Symbol;Acc:HGNC:14914]
76. LRRC58 ENSGALG00000033186 15 1 - - - - - - 1.000 - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
77. PIRT 41 1 - - - - - - 1.000 - - - phosphoinositide-interacting regulator of transient receptor potential channels
78. CAPN9 158 1 - - - - - - 1.000 - - - calpain 9
79. CLRN1 ENSGALG00000010384 7 1 - - - - - - 1.000 - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
80. ASCL4 ENSGALG00000019304 1 1 - - - - - 1.000 - - - - achaete-scute family bHLH transcription factor 4
81. DMGDH ENSGALG00000004491 15 1 - - - - - - 1.000 - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
82. PVRL1 PVRL1 3 1 - - - - - 1.000 - - - -
83. FYCO1 ENSGALG00000040212 75 1 - - - - - - 1.000 - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
84. HMGCS2 ENSGALG00000002960 54 1 - - - - - - - - - 1.000 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
85. CEP57L1 ENSGALG00000015283 22 1 - - - - - - - - - 1.000 centrosomal protein 57 like 1 [Source:HGNC Symbol;Acc:HGNC:21561]
86. OGFR ENSGALG00000005609 3 1 - - - - - - - - - 1.000 opioid growth factor receptor [Source:HGNC Symbol;Acc:HGNC:15768]
87. Sep-12 Sep-12 4 1 - - - - - 1.000 - - - -
88. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - 1.000 - - -
89. LRCH3 ENSGALG00000007595 21 1 - - - - - - 1.000 - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
90. TBC1D20 ENSGALG00000006201 6 1 - - - - - - 1.000 - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
91. LOC426355 ENSGALG00000028985 3 1 - - - - - 1.000 - - - - t-SNARE domain-containing protein 1-like, transcript variant X2
92. CECR5 3 1 - - - - - - - - - 1.000 cat eye syndrome chromosome region, candidate 5, transcript variant X2
93. SS2 ENSGALG00000003034 277 1 - - - - - - 1.000 - - - somatostatin II [Source:NCBI gene;Acc:395106]
94. KIAA0195 KIAA0195 48 1 - - - - - 1.000 - - - -
95. SNORD65 SNORD65 3 1 - - - - - - - - - 1.000
96. PRUNE2 ENSGALG00000015167 37 1 - - - - - - - - - 1.000 prune homolog 2, transcript variant X5
97. CHFR ENSGALG00000002180 17 1 - - - - - - - 1.000 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
98. FRMD4A ENSGALG00000034992 6 1 - - - - - 1.000 - - - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
99. ENSGALG00000027945 ENSGALG00000027945 2 1 - - - - - - - - - 1.000
100. LOC396098 ENSGALG00000015461 3 1 - - - - - 1.000 - - - - B6.1

There are 272 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA