Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMAD6

Gene Name Gene ID Reads Annotation
SMAD6 ENSGALG00000025898 3144 SMAD family member 6 [Source:NCBI gene;Acc:374096]











Genes with expression patterns similar to SMAD6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMAD6 ENSGALG00000025898 3144 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 6 [Source:NCBI gene;Acc:374096]
2. DSP ENSGALG00000012790 17884 2.447 - - - 0.826 - - 0.797 - 0.824 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
3. BAMBI ENSGALG00000040993 7562 2.293 - - - 0.806 - - 0.784 - - 0.703 BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
4. GATA6 ENSGALG00000014976 3256 2.203 - - - 0.723 - - 0.744 - - 0.736 GATA binding protein 6 [Source:NCBI gene;Acc:396390]
5. B3GAT2 ENSGALG00000031590 615 2.187 - - - - - - 0.722 - 0.764 0.701 beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
6. PITX2 ENSGALG00000042492 20419 1.65 - - - 0.797 - - 0.853 - - - paired like homeodomain 2 [Source:NCBI gene;Acc:395862]
7. GATA5 ENSGALG00000005352 11876 1.56 - - - 0.785 - - - - - 0.775 GATA binding protein 5 [Source:NCBI gene;Acc:396391]
8. COL4A5 ENSGALG00000008141 15874 1.537 - - - 0.818 - - - - 0.719 - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
9. ZDHHC14 ENSGALG00000013695 2648 1.521 - - - - - - 0.703 - 0.818 - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
10. MAB21L2 4841 1.521 - - - 0.745 - - 0.776 - - - mab-21-like 2 (C. elegans)
11. SEC24C ENSGALG00000005181 11132 1.508 - - - - - - 0.742 0.766 - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
12. CDH11 ENSGALG00000039985 18212 1.506 - - - - - - 0.780 - 0.726 - cadherin 11 [Source:NCBI gene;Acc:415797]
13. AP4E1 2726 1.492 - - - - - - - 0.735 0.757 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
14. PKP2 ENSGALG00000012913 2547 1.464 - - - 0.738 0.726 - - - - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
15. CFC1 ENSGALG00000012623 3164 1.459 - - - - - - - 0.750 - 0.709 cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
16. SRP68 ENSGALG00000002062 7370 1.451 - - - - - - 0.719 0.732 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
17. ENOX1 ENSGALG00000016967 1123 1.419 - - 0.708 - - - 0.711 - - - ecto-NOX disulfide-thiol exchanger 1 [Source:HGNC Symbol;Acc:HGNC:25474]
18. CRISPLD2 ENSGALG00000032143 2122 0.904 - - - - - - - - 0.904 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
19. TMEM237 ENSGALG00000008381 1317 0.88 - - - - - - - - 0.880 - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
20. NRSN1 ENSGALG00000037811 11424 0.841 - - 0.841 - - - - - - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
21. NT5C1B ENSGALG00000016471 1378 0.828 - - - - - - - - 0.828 - 5'-nucleotidase, cytosolic IB
22. GTF2IRD1 ENSGALG00000001263 14716 0.817 - - - - - - 0.817 - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
23. NDUFS3 ENSGALG00000008084 12471 0.812 - - - - - - - 0.812 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
24. ADM ENSGALG00000046593 1837 0.81 - - - - - - 0.810 - - - adrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]
25. C1H2ORF49 ENSGALG00000016796 2976 0.808 - - - - - - - 0.808 - - chromosome 1 open reading frame, human C2orf49 [Source:NCBI gene;Acc:418725]
26. COLEC10 ENSGALG00000033144 3436 0.806 - - - 0.806 - - - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
27. MRPL1 ENSGALG00000010324 5972 0.799 - - - - - - - 0.799 - - mitochondrial ribosomal protein L1 [Source:HGNC Symbol;Acc:HGNC:14275]
28. WNT7B ENSGALG00000036255 3343 0.793 - - - - 0.793 - - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
29. ADCY8 ENSGALG00000030251 40 0.792 - - - - 0.792 - - - - - adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
30. TRIM24 ENSGALG00000012823 2725 0.79 - - 0.790 - - - - - - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
31. TET1 ENSGALG00000031604 13002 0.789 - - - - - - - - 0.789 - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
32. PTX3 ENSGALG00000028284 2984 0.787 - - - 0.787 - - - - - - pentraxin 3 [Source:NCBI gene;Acc:548626]
33. AK3 ENSGALG00000014447 1855 0.787 - - - - - - - - 0.787 - adenylate kinase 3 [Source:HGNC Symbol;Acc:HGNC:17376]
34. SLC10A7 ENSGALG00000010006 2064 0.786 - - - - - - - - 0.786 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
35. METTL16 ENSGALG00000014901 3720 0.786 - - - - - - - 0.786 - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
36. POLR3B ENSGALG00000012655 704 0.782 - - 0.782 - - - - - - - Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
37. BSDC1 ENSGALG00000003405 3701 0.781 - - - - - - - - 0.781 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
38. MME ENSGALG00000010331 757 0.78 - - - - 0.780 - - - - - membrane metalloendopeptidase [Source:NCBI gene;Acc:425031]
39. MCM3 ENSGALG00000016676 16934 0.779 - - - - - - - 0.779 - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
40. SALL4 ENSGALG00000041365 6760 0.777 - - - - - - - 0.777 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
41. GPC3 ENSGALG00000006087 3744 0.773 - - - - - - - 0.773 - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
42. COL18A1 ENSGALG00000038311 11934 0.773 - - - - - - 0.773 - - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
43. BMP5 ENSGALG00000016293 2119 0.773 - - - - - - 0.773 - - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
44. YBX1 ENSGALG00000004848 20992 0.773 - - - - - - - - 0.773 - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
45. HAND1 ENSGALG00000035104 2351 0.772 - - - - - - 0.772 - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
46. FBXO3 ENSGALG00000034029 15089 0.771 - - - - - - - 0.771 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
47. TGFB2 ENSGALG00000009612 10223 0.771 - - - - - - - - 0.771 - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
48. ENSGALG00000027154 ENSGALG00000027154 617 0.768 - - - - - - - - - 0.768
49. MFGE8 ENSGALG00000006702 6976 0.766 - - - - - - - - 0.766 - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
50. FBXW7 ENSGALG00000010103 5982 0.766 - - - - - - - 0.766 - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
51. OTUD1 ENSGALG00000026426 2120 0.766 - - - - - - 0.766 - - - OTU deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:27346]
52. PI15 ENSGALG00000029264 21 0.763 - - - - - - - - - 0.763 peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
53. SPARC ENSGALG00000004184 36410 0.763 - - - - - - 0.763 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
54. FUCA2 ENSGALG00000013773 67 0.76 - - - - - - - - - 0.760 alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
55. CTNNB1 ENSGALG00000037203 56399 0.759 - - - - - - - - - 0.759 catenin beta 1 [Source:NCBI gene;Acc:395964]
56. BMP4 ENSGALG00000012429 4306 0.758 - - - - - - - - - 0.758 bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
57. MACC1 ENSGALG00000010868 270 0.757 - - - - 0.757 - - - - - MACC1, MET transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:30215]
58. LRRC16A LRRC16A 2041 0.757 - - - - - - - 0.757 - -
59. GEM ENSGALG00000032506 439 0.757 - - - - - - 0.757 - - - GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
60. FBLN1 ENSGALG00000014233 5062 0.757 - - - - - - 0.757 - - - fibulin 1 [Source:NCBI gene;Acc:373979]
61. TMEM61 ENSGALG00000010801 171 0.756 - - 0.756 - - - - - - - transmembrane protein 61 [Source:HGNC Symbol;Acc:HGNC:27296]
62. FGF12 ENSGALG00000036971 2631 0.755 - - - - - - 0.755 - - - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
63. ZRSR2 ENSGALG00000016552 1670 0.754 - - 0.754 - - - - - - - zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 [Source:HGNC Symbol;Acc:HGNC:23019]
64. ALDH7A1 ENSGALG00000008229 5891 0.754 - - - - - - - 0.754 - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
65. EOMES ENSGALG00000027247 27 0.754 - - - - - - - - - 0.754 Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
66. PERP2 ENSGALG00000027207 1240 0.753 - - - - - - 0.753 - - - PERP2, TP53 apoptosis effector [Source:NCBI gene;Acc:421682]
67. MARK1 ENSGALG00000009483 10350 0.753 - - - - - - - - 0.753 - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
68. DNAJC18 ENSGALG00000002528 2666 0.753 - - - - - - 0.753 - - - DnaJ heat shock protein family (Hsp40) member C18 [Source:NCBI gene;Acc:416189]
69. FAR2 ENSGALG00000017291 16 0.752 - - - - - - - - - 0.752 fatty acyl-CoA reductase 2 [Source:HGNC Symbol;Acc:HGNC:25531]
70. MAB21L1 ENSGALG00000045052 1677 0.752 - - - - - - 0.752 - - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
71. EPT1 EPT1 2193 0.752 - - - - - - 0.752 - - -
72. SLC35B1 ENSGALG00000035057 10683 0.752 - - - - - - - 0.752 - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
73. ENSGALG00000011687 ENSGALG00000011687 4553 0.752 - - - 0.752 - - - - - -
74. FBXW2 ENSGALG00000000864 2995 0.752 - - - - - - - 0.752 - - F-box and WD repeat domain containing 2 [Source:NCBI gene;Acc:417088]
75. ADI1 ENSGALG00000025796 8636 0.751 - - - - - - - - 0.751 - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
76. HYOU1 ENSGALG00000007659 3555 0.75 - - - - - - - 0.750 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
77. ENSGALG00000014441 ENSGALG00000014441 1442 0.75 - - - - - - - 0.750 - -
78. VPS72 ENSGALG00000000793 329 0.749 - - - - - - - - 0.749 - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
79. EML5 ENSGALG00000010639 25 0.749 - - - - - - - - - 0.749 echinoderm microtubule associated protein like 5, transcript variant X1
80. TRAF7 ENSGALG00000005767 4615 0.748 - - - - - - - 0.748 - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
81. TPRG1L ENSGALG00000001024 9809 0.748 - - - - - - 0.748 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
82. DYM ENSGALG00000037426 1513 0.748 - - - - - - 0.748 - - - dymeclin [Source:NCBI gene;Acc:426843]
83. EP3 EP3 741 0.747 - - - - - - - - 0.747 -
84. RNF8 ENSGALG00000023256 5495 0.747 - - - - - - - 0.747 - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
85. TMLHE ENSGALG00000007443 3619 0.746 - - - - - - - 0.746 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
86. SEPSECS ENSGALG00000014386 2611 0.746 - - - - - - - 0.746 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:NCBI gene;Acc:422808]
87. RANBP10 ENSGALG00000001439 4003 0.745 - - - - - - - 0.745 - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
88. AKR1B1L ENSGALG00000003466 6237 0.745 - - - - - - - 0.745 - - aldo-keto reductase family 1 member E2 [Source:NCBI gene;Acc:418171]
89. PLIN3 ENSGALG00000044632 370 0.745 - - - - - - - - - 0.745 perilipin 3, transcript variant X2
90. PRRG3 ENSGALG00000027977 1295 0.744 - - - - - - 0.744 - - - proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]
91. SEC63 ENSGALG00000015308 11596 0.744 - - - - - - 0.744 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
92. RQCD1 RQCD1 110 0.744 - - - - - - - - - 0.744
93. gga-mir-6681 ENSGALG00000027840 546 0.744 - - - - - - - - 0.744 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
94. GBE1 ENSGALG00000042771 2323 0.744 - - - - - - - - - 0.744 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
95. ELL ENSGALG00000033513 6536 0.743 - - - - - - - 0.743 - - elongation factor for RNA polymerase II [Source:NCBI gene;Acc:420124]
96. NDUFA7 ENSGALG00000000629 14046 0.743 - - - - - - 0.743 - - - NADH:ubiquinone oxidoreductase subunit A7
97. FIBIN ENSGALG00000023904 3350 0.743 - - - - - - - - - 0.743 fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
98. EFHD1 ENSGALG00000001428 2831 0.742 - - - - - - 0.742 - - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
99. GATM ENSGALG00000023435 102 0.741 - - - - 0.741 - - - - - glycine amidinotransferase [Source:NCBI gene;Acc:395504]
100. UCHL3 ENSGALG00000016921 16208 0.74 - - - - - - 0.740 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA