Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMAD5

Gene Name Gene ID Reads Annotation
SMAD5 ENSGALG00000006309 1748 SMAD family member 5 [Source:NCBI gene;Acc:395679]











Genes with expression patterns similar to SMAD5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMAD5 ENSGALG00000006309 1748 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 5 [Source:NCBI gene;Acc:395679]
2. RBL1 ENSGALG00000001332 2568 1.68 - - - - - - 0.903 0.777 - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
3. USP8 ENSGALG00000005894 4499 0.958 - - - - - - 0.958 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
4. SRPK1 ENSGALG00000037546 1849 0.931 - - - - - - 0.931 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
5. MORC3 ENSGALG00000036556 2976 0.92 - - - - - - 0.920 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
6. RPIA ENSGALG00000015960 2784 0.917 - - - - - - 0.917 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
7. NSMCE4A ENSGALG00000009504 1302 0.915 - - - - - - 0.915 - - - NSE4 homolog A, SMC5-SMC6 complex component
8. GPN3 ENSGALG00000003807 6320 0.913 - - - - - - 0.913 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
9. SUGP1 ENSGALG00000042132 2771 0.905 - - - - - - 0.905 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
10. PLCE1 ENSGALG00000039528 151 0.904 - - - - - - 0.904 - - - phospholipase C epsilon 1
11. EFNB2 ENSGALG00000029175 5664 0.901 - - - - - - 0.901 - - - ephrin B2 [Source:NCBI gene;Acc:395625]
12. SLC25A21 ENSGALG00000010117 536 0.899 - - - - - - 0.899 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
13. TLCD1 ENSGALG00000003973 17569 0.897 - - - - - - 0.897 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
14. PEX6 ENSGALG00000045514 4582 0.892 - - - - - - 0.892 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
15. TLCD2 ENSGALG00000021592 1166 0.892 - - - - - - 0.892 - - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
16. PGAP2 ENSGALG00000027762 2583 0.891 - - - - - - 0.891 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
17. TAF8 ENSGALG00000003498 2071 0.89 - - - - - - 0.890 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
18. MBNL2 ENSGALG00000016890 3162 0.887 - - - - - - 0.887 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
19. WDR47 ENSGALG00000002129 2624 0.886 - - - - - - 0.886 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
20. RBM34 ENSGALG00000029915 5618 0.884 - - - - - - 0.884 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
21. TUBA4A ENSGALG00000000433 1367 0.884 - - - - - - 0.884 - - - tubulin alpha 4a
22. MBNL1 ENSGALG00000029190 3953 0.88 - - - - - - 0.880 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
23. TM9SF4 ENSGALG00000006568 567 0.879 - - - - - - 0.879 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
24. BPHL ENSGALG00000029659 501 0.874 - - - - - - 0.874 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
25. CNOT10 ENSGALG00000011494 2614 0.873 - - - - - - 0.873 - - - CCR4-NOT transcription complex subunit 10 [Source:NCBI gene;Acc:420669]
26. USP54 ENSGALG00000005232 2749 0.87 - - - - - - 0.870 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
27. JMJD7 ENSGALG00000026846 1320 0.868 - - - - - - 0.868 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
28. WDSUB1 ENSGALG00000012574 2038 0.868 - - - - - - 0.868 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
29. DIEXF ENSGALG00000009887 4782 0.865 - - - - - - 0.865 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
30. GAS2 ENSGALG00000003655 2672 0.864 - - - - - - 0.864 - - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
31. LSM10 ENSGALG00000002127 2519 0.862 - - - - - - 0.862 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
32. PTN ENSGALG00000040493 864 0.859 - - - - - - 0.859 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
33. ENSGALG00000016099 ENSGALG00000016099 138 0.859 - - - - - - 0.859 - - -
34. ENSGALG00000003619 ENSGALG00000003619 58 0.858 - - - - - - 0.858 - - -
35. SNORA31 SNORA31 183 0.858 - - - - - - 0.858 - - -
36. MPST ENSGALG00000040840 2122 0.857 - - - - - - 0.857 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
37. SCLT1 2397 0.857 - - - - - - 0.857 - - - sodium channel and clathrin linker 1, transcript variant X6
38. TCTE1 ENSGALG00000010165 65 0.857 - - - - - - 0.857 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
39. MXRA5 ENSGALG00000016635 352 0.857 - - - - - - 0.857 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
40. ENSGALG00000026925 ENSGALG00000026925 119 0.856 - - - - - - 0.856 - - -
41. HEMK1 ENSGALG00000002253 40 0.856 - - - - - - 0.856 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
42. SCUBE1 ENSGALG00000014178 91 0.856 - - - - - - 0.856 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
43. METTL24 ENSGALG00000041120 60 0.856 - - - - - - 0.856 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
44. GRB14 ENSGALG00000020703 42 0.855 - - - - - - 0.855 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
45. ENTPD8L ENSGALG00000008936 731 0.855 - - - - - - 0.855 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
46. RBM19 ENSGALG00000008289 10702 0.855 - - - - - - 0.855 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
47. HELLS ENSGALG00000005451 7094 0.855 - - - - - - 0.855 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
48. ENSGALG00000013233 ENSGALG00000013233 3265 0.855 - - - - - - 0.855 - - -
49. PIK3R3 ENSGALG00000010335 374 0.851 - - - - - - 0.851 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
50. FAM193A ENSGALG00000015667 3075 0.85 - - - - - - 0.850 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
51. FAM183A 242 0.85 - - - - - - 0.850 - - - family with sequence similarity 183 member A, transcript variant 2
52. NCAPG2 ENSGALG00000006525 2319 0.85 - - - - - - 0.850 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
53. SCAF4 ENSGALG00000033965 2027 0.85 - - - - - - 0.850 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
54. MESDC1 1013 0.847 - - - - - - 0.847 - - - mesoderm development candidate 1
55. PMPCB ENSGALG00000008280 6357 0.847 - - - - - - 0.847 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
56. HESX1 ENSGALG00000005506 203 0.847 - - - - - - 0.847 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
57. DNAJC16 ENSGALG00000032832 750 0.846 - - - - - - 0.846 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
58. ECHDC3 ENSGALG00000006690 1299 0.845 - - - - - - 0.845 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
59. ZFYVE19 ENSGALG00000008460 2750 0.844 - - - - - - 0.844 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
60. NSRP1 ENSGALG00000004186 1683 0.843 - - - - - - 0.843 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
61. CEP290 ENSGALG00000011177 1559 0.841 - - - - - - 0.841 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
62. TM2D3 ENSGALG00000026271 2566 0.841 - - - - - - 0.841 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
63. RNASEH1 ENSGALG00000016389 2694 0.839 - - - - - - 0.839 - - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
64. ZYX ENSGALG00000014688 8686 0.838 - - - - - - 0.838 - - - zyxin [Source:NCBI gene;Acc:418300]
65. UPK3BL ENSGALG00000001885 1650 0.838 - - - - - - 0.838 - - - uroplakin 3B-like
66. SQLE ENSGALG00000036915 4172 0.837 - - - - - - 0.837 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
67. INTS7 ENSGALG00000009843 2395 0.837 - - - - - - 0.837 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
68. RAB1A ENSGALG00000031582 6929 0.836 - - - - - - 0.836 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
69. GAS6 ENSGALG00000016820 481 0.836 - - - - - - 0.836 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
70. MCEE ENSGALG00000003913 1527 0.836 - - - - - - 0.836 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
71. KIAA1524 ENSGALG00000015360 3527 0.836 - - - - - - 0.836 - - - KIAA1524 [Source:NCBI gene;Acc:418410]
72. HYOU1 ENSGALG00000007659 3555 0.835 - - - - - - 0.835 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
73. LFNG ENSGALG00000038515 5178 0.834 - - - - - - 0.834 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
74. SPCS2 ENSGALG00000019036 9496 0.833 - - - - - - 0.833 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
75. PALD1 ENSGALG00000004465 3553 0.833 - - - - - - 0.833 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
76. WIPI1 ENSGALG00000004215 3359 0.832 - - - - - - 0.832 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
77. GPC3 ENSGALG00000006087 3744 0.832 - - - - - - 0.832 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
78. C14orf80 C14orf80 1921 0.832 - - - - - - 0.832 - - -
79. PKN3 532 0.832 - - - - - - 0.832 - - - protein kinase N3, transcript variant X2
80. UBE3B ENSGALG00000013851 1672 0.831 - - - - - - 0.831 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
81. FAM57A ENSGALG00000004820 1492 0.828 - - - - - - 0.828 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
82. SPAG9 ENSGALG00000034001 2314 0.827 - - - - - - 0.827 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
83. B4GALT3 ENSGALG00000022891 2825 0.827 - - - - - - 0.827 - - - beta-1,4-galactosyltransferase 3
84. CCNL1 ENSGALG00000009699 1033 0.826 - - - - - - 0.826 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
85. ENSGALG00000028164 ENSGALG00000028164 3325 0.825 - - - - - - 0.825 - - -
86. PLEKHA3 ENSGALG00000009135 1700 0.824 - - - - - - 0.824 - - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
87. OCRL ENSGALG00000003920 1812 0.824 - - - - - - 0.824 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
88. MSL3 ENSGALG00000041433 2957 0.824 - - - - - - 0.824 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
89. SDK2 ENSGALG00000031895 2682 0.822 - - - - - - 0.822 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
90. FN3KRP ENSGALG00000028979 4160 0.821 - - - - - - 0.821 - - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
91. MST1 ENSGALG00000002722 994 0.821 - - - - - - 0.821 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
92. RCAN3 ENSGALG00000004282 7778 0.82 - - - - - - 0.820 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
93. MED16 ENSGALG00000001978 2387 0.82 - - - - - - 0.820 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
94. NUP205 ENSGALG00000011662 4157 0.82 - - - - - - 0.820 - - - nucleoporin 205
95. SUN1 ENSGALG00000003781 3442 0.819 - - - - - - 0.819 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
96. SPG11 ENSGALG00000008180 1890 0.819 - - - - - - 0.819 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
97. COPS8 ENSGALG00000033385 10166 0.819 - - - - - - 0.819 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
98. TSPAN12 ENSGALG00000009029 2145 0.818 - - - - - - 0.818 - - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
99. SGSM3 ENSGALG00000012033 1839 0.817 - - - - - - 0.817 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
100. IFT74 ENSGALG00000001801 1932 0.816 - - - - - - 0.816 - - - intraflagellar transport 74 [Source:HGNC Symbol;Acc:HGNC:21424]

There are 211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA