Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMAD4_3

Gene Name Gene ID Reads Annotation
SMAD4_3 SMAD4_3 131










Genes with expression patterns similar to SMAD4_3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SMAD4_3 SMAD4_3 131 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. npdc1 npdc1 221 1.661 - 0.840 - 0.821 - - - - -
3. luzp2 ENSDARG00000068247 80 1.661 - - - 0.815 - 0.846 - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
4. mirlet7i 192 1.659 - 0.933 0.726 - - - - - - microRNA let-7i
5. CR788231.1 CR788231.1 61 1.64 - 0.888 - 0.752 - - - - -
6. htra1b ENSDARG00000014907 146 1.627 - - - 0.826 - 0.801 - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
7. ptx3a ENSDARG00000068275 589 1.62 - 0.789 - - - 0.831 - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
8. nek2 ENSDARG00000005619 273 1.612 - - - - - 0.871 0.741 - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
9. NHSL1 NHSL1 182 1.604 - 0.735 0.869 - - - - - -
10. si:dkey-202n8.1 si:dkey-202n8.1 35 1.591 - 0.735 0.856 - - - - - -
11. acyp1 ENSDARG00000060126 2161 1.588 - 0.793 - - - - 0.795 - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
12. CR855306.1 ENSDARG00000099475 102 1.578 - 0.829 0.749 - - - - - -
13. zgc:101566 ENSDARG00000086342 363 1.577 - - 0.732 0.845 - - - - - zgc:101566 [Source:ZFIN;Acc:ZDB-GENE-041010-73]
14. exoc4 ENSDARG00000004336 32 1.568 - - 0.801 - - - 0.767 - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
15. sp5l ENSDARG00000115868 361 1.535 - - - - - 0.830 0.705 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
16. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 1.519 - - - 0.780 - - 0.739 - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
17. aak1 aak1 81 1.514 - - 0.718 - - 0.796 - - -
18. lef1 ENSDARG00000031894 492 1.51 - 0.709 - 0.801 - - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
19. slc25a3a ENSDARG00000027424 11 1.502 - - - - - 0.797 0.705 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
20. crtac1a ENSDARG00000059826 22 1.5 - 0.703 - - - 0.797 - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
21. fopnl ENSDARG00000071198 1002 1.499 - - 0.768 - 0.731 - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
22. mlh3 ENSDARG00000056334 142 1.497 - 0.712 - - - 0.785 - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
23. efnb3b ENSDARG00000042277 5823 1.453 - 0.727 - - - - 0.726 - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
24. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1.452 - - - - - 0.747 0.705 - -
25. CNOT4 CNOT4 899 1.446 - 0.720 0.726 - - - - - -
26. batf3 ENSDARG00000042577 34 1.42 - 0.707 - - - 0.713 - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
27. ZXDC ZXDC 93 0.95 - 0.950 - - - - - - -
28. chmp5a ENSDARG00000038855 129 0.919 - 0.919 - - - - - - - charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
29. gltscr1l gltscr1l 782 0.918 - - - - - - 0.918 - -
30. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 0.909 - - 0.909 - - - - - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
31. si:ch211-28p3.4 ENSDARG00000091009 280 0.906 - 0.906 - - - - - - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
32. ctgfb ENSDARG00000104292 69 0.905 - - - - - 0.905 - - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
33. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 0.9 - - - - - - 0.900 - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
34. si:dkey-177p2.18 ENSDARG00000091633 91 0.898 - - - - - 0.898 - - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
35. csk ENSDARG00000067996 834 0.896 - - - - - - 0.896 - - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
36. mboat2b ENSDARG00000042551 910 0.894 - 0.894 - - - - - - - membrane bound O-acyltransferase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-185]
37. zgc:91999 ENSDARG00000105001 129 0.894 - 0.894 - - - - - - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
38. rcn2 ENSDARG00000039378, ENSDARG00000110051, ENSDARG00000113764 61 0.893 - - - - - - 0.893 - - reticulocalbin 2 [Source:ZFIN;Acc:ZDB-GENE-050706-62]
39. AL935029.1 AL935029.1 514 0.892 - 0.892 - - - - - - -
40. svilb_1 ENSDARG00000014651 60 0.89 - - - - - - 0.890 - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
41. nkx3.2 ENSDARG00000037639 575 0.888 - 0.888 - - - - - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
42. gro1 gro1 81 0.887 - - - - - 0.887 - - -
43. trmt5 ENSDARG00000069278 228 0.884 - - - - - 0.884 - - - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
44. cox4i2 ENSDARG00000022509 362 0.881 - 0.881 - - - - - - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
45. ybey_1 ENSDARG00000011999, ENSDARG00000110510 75 0.881 - 0.881 - - - - - - - ybeY metalloendoribonuclease [Source:ZFIN;Acc:ZDB-GENE-030131-437]
46. MAP1S_1 MAP1S_1 1117 0.876 - - - 0.876 - - - - -
47. si:ch211-255f4.8 ENSDARG00000103571 91 0.875 - - - - - 0.875 - - - si:ch211-255f4.8 [Source:ZFIN;Acc:ZDB-GENE-050208-709]
48. dfnb31a 166 0.874 - - - - - - 0.874 - - deafness, autosomal recessive 31a, transcript variant X3
49. CU571255.1 CU571255.1 902 0.872 - 0.872 - - - - - - -
50. syt8 syt8 82 0.872 - 0.872 - - - - - - -
51. NSMCE2 ENSDARG00000076379 2133 0.87 - 0.870 - - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
52. si:dkey-260c8.4 si:dkey-260c8.4 106 0.869 - - - - - - 0.869 - -
53. tyr ENSDARG00000039077 568 0.869 - 0.869 - - - - - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
54. asic1a ENSDARG00000008329 347 0.867 - - 0.867 - - - - - - acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]
55. trim23 ENSDARG00000069420 103 0.867 - - - - - 0.867 - - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
56. cherp ENSDARG00000021812 286 0.865 - - - - - 0.865 - - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
57. ncbp2 ENSDARG00000014898 232 0.865 - - - - - 0.865 - - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
58. wrnip1 ENSDARG00000005218 695 0.864 - - 0.864 - - - - - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
59. si:ch211-231i17.5 si:ch211-231i17.5 154 0.864 - - 0.864 - - - - - -
60. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.863 - - 0.863 - - - - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
61. mkxa ENSDARG00000075450, ENSDARG00000114299 233 0.863 - 0.863 - - - - - - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
62. nlgn1 ENSDARG00000077710 72 0.861 - - - - - 0.861 - - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
63. cep135 ENSDARG00000002991 164 0.861 - - - - - - 0.861 - - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
64. si:dkey-199m13.2 si:dkey-199m13.2 31 0.86 - - 0.860 - - - - - -
65. hltf ENSDARG00000026053 115 0.859 - - - 0.859 - - - - - helicase-like transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-3306]
66. tsc1b ENSDARG00000057918 738 0.858 - - - - - 0.858 - - - TSC complex subunit 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3404]
67. fgd 377 0.857 - 0.857 - - - - - - - faciogenital dysplasia
68. ARHGAP42 ARHGAP42 53 0.856 - - - 0.856 - - - - -
69. socs8 socs8 128 0.852 - - 0.852 - - - - - -
70. CU694319.1 CU694319.1 72 0.852 - - 0.852 - - - - - -
71. atat1 ENSDARG00000004472 700 0.852 - - - - - - 0.852 - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
72. glcci1 496 0.85 - - - - - 0.850 - - - glucocorticoid induced 1
73. TRPC4 TRPC4 18 0.848 - - 0.848 - - - - - -
74. znf710a ENSDARG00000014680 582 0.847 - - - - - - 0.847 - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
75. TXNRD2 TXNRD2 14 0.847 - - 0.847 - - - - - -
76. CPNE8 ENSDARG00000025189 11 0.846 - - 0.846 - - - - - - copine VIII [Source:ZFIN;Acc:ZDB-GENE-100809-1]
77. si:ch211-9d9.1 ENSDARG00000099839 75 0.846 - - - - - 0.846 - - - si:ch211-9d9.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2657]
78. LPXN ENSDARG00000079315 12 0.845 - - 0.845 - - - - - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
79. si:dkey-94e7.2 ENSDARG00000068474 14 0.845 - - 0.845 - - - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
80. zgc:158464 ENSDARG00000100342 18 0.845 - - 0.845 - - - - - - zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
81. mir457b 21 0.845 - - 0.845 - - - - - - microRNA 457b
82. LAMB3 LAMB3 31 0.845 - - 0.845 - - - - - -
83. ankrd1b ENSDARG00000076192 204 0.845 - - 0.845 - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
84. spata2l ENSDARG00000068814 152 0.844 - 0.844 - - - - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
85. st6galnac5a ENSDARG00000039220 76 0.844 - 0.844 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
86. PEX5L PEX5L 179 0.844 - - - 0.844 - - - - -
87. zgc:92594 ENSDARG00000089517 83 0.844 - 0.844 - - - - - - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
88. cep128 ENSDARG00000103771 75 0.844 - 0.844 - - - - - - - centrosomal protein 128 [Source:ZFIN;Acc:ZDB-GENE-070410-34]
89. tcf19l ENSDARG00000040036 369 0.844 - 0.844 - - - - - - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
90. KIF13A ENSDARG00000069594 352 0.842 - 0.842 - - - - - - - kinesin family member 13A [Source:ZFIN;Acc:ZDB-GENE-090901-1]
91. CEP152 ENSDARG00000075725 391 0.842 - - - - - 0.842 - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
92. PRC1 PRC1 583 0.841 - - - - - - 0.841 - -
93. cdk10 ENSDARG00000034256 166 0.838 - 0.838 - - - - - - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
94. inpp5e ENSDARG00000103926 567 0.838 - - - - - 0.838 - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
95. nmrk1 ENSDARG00000037913 18 0.837 - - 0.837 - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
96. CABZ01032467.1 CABZ01032467.1 400 0.836 - - - - - 0.836 - - -
97. lbx1b ENSDARG00000018611 399 0.836 - - - 0.836 - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
98. fbxo32 ENSDARG00000040277 93 0.835 - - - 0.835 - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
99. ENSDARG00000023499 ENSDARG00000023499 395 0.835 - - - 0.835 - - - - -
100. RNF39 RNF39 52 0.835 - - - 0.835 - - - - -

There are 915 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA