Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMAD3

Gene Name Gene ID Reads Annotation
SMAD3 ENSGALG00000035701 161 SMAD family member 3 [Source:NCBI gene;Acc:395132]











Genes with expression patterns similar to SMAD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMAD3 ENSGALG00000035701 161 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SMAD family member 3 [Source:NCBI gene;Acc:395132]
2. PLK4 ENSGALG00000010195 514 0.909 - - - - - - 0.909 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
3. ARHGAP12 ENSGALG00000007254 479 0.904 - - - - - - 0.904 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
4. NPTX2 ENSGALG00000003562 249 0.9 - - - - - - 0.900 - - - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
5. ITGB2 ENSGALG00000007511 46 0.897 - - - - - 0.897 - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
6. LYRM1 ENSGALG00000002273 1523 0.895 - - - - - - 0.895 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
7. PANX1 ENSGALG00000039751 70 0.895 - - - - - - 0.895 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
8. MTOR ENSGALG00000003339 328 0.894 - - - - - - 0.894 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
9. EFCAB7 ENSGALG00000010998 13 0.894 - - - - - - 0.894 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
10. PTPN21 ENSGALG00000010616 129 0.894 - - - - - - 0.894 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
11. HN1L HN1L 247 0.894 - - - - - - 0.894 - - -
12. FAM46C 13 0.893 - - - - - - 0.893 - - - family with sequence similarity 46 member C
13. CHST9 ENSGALG00000019489 21 0.893 - - - - - - 0.893 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
14. MBL2 ENSGALG00000002507 17 0.893 - - - - - - 0.893 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
15. CBLN1 ENSGALG00000042664 15 0.893 - - - - - - 0.893 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
16. ACBD7 ENSGALG00000019663 2328 0.893 - - - - - - 0.893 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
17. MAP3K19 ENSGALG00000028457 17 0.893 - - - - - - 0.893 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
18. ASH1L ENSGALG00000014638 803 0.892 - - - - - - 0.892 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
19. SCTR ENSGALG00000012106 49 0.892 - - - - - - 0.892 - - - secretin receptor [Source:NCBI gene;Acc:770943]
20. RNF170 ENSGALG00000015386 296 0.891 - - - - - - 0.891 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
21. IQCH ENSGALG00000007909 128 0.889 - - - - - - 0.889 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
22. CXADR ENSGALG00000015701 96 0.888 - - - - - - 0.888 - - - coxsackie virus and adenovirus receptor, transcript variant X2
23. LOC112532477 ENSGALG00000027520 40 0.886 - - - - - - 0.886 - - - fibrinogen-like protein 1-like protein
24. FAM69A ENSGALG00000005918 157 0.884 - - - - - - 0.884 - - - family with sequence similarity 69 member A, transcript variant X4
25. SYT8 ENSGALG00000006602 369 0.883 - - - - - - 0.883 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
26. TAP1 ENSGALG00000035075 54 0.883 - - - - - - 0.883 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
27. KIAA1244 KIAA1244 62 0.883 - - - - - - 0.883 - - -
28. RAB22A ENSGALG00000007554 201 0.88 - - - - - - 0.880 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
29. ADAP2 ENSGALG00000003319 134 0.879 - - - - - - 0.879 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
30. FOXRED1 ENSGALG00000046347 4176 0.879 - - - - - - 0.879 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
31. KLF4 ENSGALG00000026928 184 0.879 - - - - - - 0.879 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
32. TFB1M ENSGALG00000013647 84 0.877 - - - - - - 0.877 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
33. SLC16A14 ENSGALG00000002897 157 0.874 - - - - - - 0.874 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
34. TP73 ENSGALG00000001006 335 0.873 - - - - - - 0.873 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
35. LOC419074 ENSGALG00000017336 1885 0.872 - - - - - - 0.872 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
36. WDR35 157 0.872 - - - - - - 0.872 - - - WD repeat domain 35, transcript variant X1
37. C8orf34 ENSGALG00000034561 286 0.871 - - - - - - 0.871 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
38. AFG3L2 ENSGALG00000013853 1138 0.871 - - - - - - 0.871 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
39. CAT-1 CAT-1 115 0.87 - - - - - - 0.870 - - -
40. ANO6 ENSGALG00000009638 470 0.869 - - - - - - 0.869 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
41. GRID1 ENSGALG00000037366 159 0.866 - - - - - - 0.866 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
42. LOC769139 ENSGALG00000026754 753 0.865 - - - - - - 0.865 - - - feather keratin 1-like, transcript variant X2
43. SLC2A9 ENSGALG00000014971 751 0.864 - - - - - - 0.864 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
44. GGT7 ENSGALG00000001062 476 0.862 - - - - - - 0.862 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
45. VWDE ENSGALG00000042443 160 0.86 - - - - - - 0.860 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
46. NCOA5 ENSGALG00000007009 299 0.86 - - - - - - 0.860 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
47. ENKUR ENSGALG00000007680 637 0.856 - - - - - - 0.856 - - - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
48. KCNK2 ENSGALG00000009687 1552 0.854 - - - - - - 0.854 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
49. RASA1 ENSGALG00000017706 224 0.851 - - - - - - 0.851 - - - RAS p21 protein activator 1
50. TNFRSF1A ENSGALG00000039461 1569 0.851 - - - - - - 0.851 - - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
51. FANCA ENSGALG00000000516 250 0.842 - - - - - - 0.842 - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
52. SNX10 ENSGALG00000011046 333 0.841 - - - - - - 0.841 - - - sorting nexin 10 [Source:NCBI gene;Acc:420628]
53. C12H3ORF19 C12H3ORF19 1278 0.841 - - - - - - 0.841 - - -
54. MYL1 ENSGALG00000002907 1300 0.84 - - - - - - 0.840 - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
55. RPE65 ENSGALG00000011259 51 0.84 - - - - - - 0.840 - - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
56. METAP1 ENSGALG00000012239 1125 0.84 - - - - - - 0.840 - - - methionyl aminopeptidase 1 [Source:NCBI gene;Acc:422704]
57. TTC12 1384 0.84 - - - - - - 0.840 - - - tetratricopeptide repeat domain 12, transcript variant X4
58. PPP2R3A ENSGALG00000034512 1091 0.839 - - - - - - 0.839 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
59. WSCD1 ENSGALG00000005886 539 0.838 - - - - - - 0.838 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
60. SLCO3A1 ENSGALG00000006871 1125 0.836 - - - - - - 0.836 - - - solute carrier organic anion transporter family member 3A1 [Source:HGNC Symbol;Acc:HGNC:10952]
61. AAGAB ENSGALG00000007887 142 0.835 - - - - - - 0.835 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
62. USP42 ENSGALG00000003378 1392 0.835 - - - - - - 0.835 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
63. CENPT ENSGALG00000028900 674 0.831 - - - - - - 0.831 - - - centromere protein T [Source:NCBI gene;Acc:415654]
64. AADAT ENSGALG00000009655 1692 0.831 - - - - - - 0.831 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
65. PDZD8 ENSGALG00000029095 1068 0.83 - - - - - - 0.830 - - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
66. PPARG ENSGALG00000004974 62 0.829 - - - - - 0.829 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
67. PKIB ENSGALG00000027036 1663 0.826 - - - - - - 0.826 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
68. DUSP10 ENSGALG00000009450 1041 0.826 - - - - - - 0.826 - - - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
69. LGI2 ENSGALG00000043283 433 0.825 - - - - - - 0.825 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
70. PCDH11X ENSGALG00000006851 314 0.825 - - - - - - 0.825 - - - protocadherin 11 X-linked, transcript variant X1
71. SPTLC2 ENSGALG00000031928 443 0.825 - - - - - - 0.825 - - - serine palmitoyltransferase long chain base subunit 2 [Source:NCBI gene;Acc:423379]
72. MAP3K8 ENSGALG00000007356 188 0.819 - - - - - 0.819 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
73. FAM210A ENSGALG00000013887 1828 0.817 - - - - - - 0.817 - - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
74. MEGF10 ENSGALG00000014699 248 0.814 - - - - - - 0.814 - - - multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
75. ZFYVE16 ENSGALG00000015576 287 0.814 - - - - - - 0.814 - - - zinc finger FYVE-type containing 16, transcript variant X3
76. S100A9 ENSGALG00000024272 103 0.813 - - - - - 0.813 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
77. PIH1D3 ENSGALG00000004870 1365 0.812 - - - - - - 0.812 - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
78. ZBTB10 ENSGALG00000034376 3271 0.812 - - - - - - 0.812 - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
79. CCDC173 358 0.811 - - - - - - 0.811 - - - coiled-coil domain containing 173
80. ABAT ENSGALG00000007334 28 0.81 - - - - - - - - - 0.810 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
81. OPTN ENSGALG00000013738 1024 0.809 - - - - - - 0.809 - - - optineurin [Source:NCBI gene;Acc:374079]
82. TTC38 ENSGALG00000014551 1135 0.807 - - - - - - 0.807 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
83. FIBCD1 ENSGALG00000003866 2 0.806 - - - - - 0.806 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
84. TMEM65 ENSGALG00000037371 776 0.805 - - - - - - 0.805 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
85. SGK196 SGK196 83 0.803 - - - - - 0.803 - - - -
86. KIAA2018 KIAA2018 67 0.802 - - - - - 0.802 - - - -
87. EPB41L2 ENSGALG00000035769 2396 0.801 - - - - - - 0.801 - - - erythrocyte membrane protein band 4.1 like 2 [Source:HGNC Symbol;Acc:HGNC:3379]
88. NIPAL3 ENSGALG00000004268 37 0.8 - - - - - 0.800 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
89. PIBF1 ENSGALG00000016929 593 0.798 - - - - - - 0.798 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
90. EIF2AK2 ENSGALG00000010560 749 0.798 - - - - - - 0.798 - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
91. GANC ENSGALG00000009036 731 0.796 - - - - - - 0.796 - - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
92. TYW5 ENSGALG00000008145 1691 0.792 - - - - - - 0.792 - - - tRNA-yW synthesizing protein 5 [Source:NCBI gene;Acc:424065]
93. CPSF4L ENSGALG00000004441 4 0.791 - - - - - 0.791 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
94. LOC396365 ENSGALG00000027219 7 0.791 - - - - - 0.791 - - - - preprogastrin
95. SLC51A ENSGALG00000007478 6 0.791 - - - - - 0.791 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
96. HSD11B1b ENSGALG00000001369 1 0.791 - - - - - 0.791 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
97. ENSGALG00000016499 ENSGALG00000016499 4 0.791 - - - - - 0.791 - - - -
98. TMEM56 ENSGALG00000005580 10 0.791 - - - - - 0.791 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
99. C1QTNF4 ENSGALG00000008080 3 0.791 - - - - - 0.791 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
100. CHRNB3 ENSGALG00000015384 9 0.791 - - - - - 0.791 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]

There are 137 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA