Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMAD1

Gene Name Gene ID Reads Annotation
SMAD1 ENSGALG00000009977 3540 SMAD family member 1 [Source:NCBI gene;Acc:395680]











Genes with expression patterns similar to SMAD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMAD1 ENSGALG00000009977 3540 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 SMAD family member 1 [Source:NCBI gene;Acc:395680]
2. DNTTIP1 ENSGALG00000003575 4687 2.533 - - 0.751 - - - 0.814 0.968 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
3. GID8 ENSGALG00000005700 3992 2.416 - - 0.724 - - - 0.713 0.979 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
4. SYAP1 ENSGALG00000016548 3347 1.824 - - - - - - 0.844 0.980 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
5. RAD50 ENSGALG00000006794 4308 1.823 - - 0.876 - - - - 0.947 - - RAD50 double strand break repair protein, transcript variant X4
6. ATRIP ENSGALG00000004670 3647 1.816 - - 0.844 - - - - 0.972 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
7. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.788 - - 0.805 - - - - 0.983 - -
8. CACTIN ENSGALG00000024391 1408 1.775 - - - - - - 0.787 0.988 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
9. ZUFSP 549 1.758 - - - - - - 0.767 0.991 - - zinc finger with UFM1 specific peptidase domain
10. TAF7 4725 1.754 - - - - - - 0.800 0.954 - - TATA-box binding protein associated factor 7, transcript variant X1
11. C6ORF162 C6ORF162 4217 1.744 - - 0.756 - - - - 0.988 - -
12. SEC24B ENSGALG00000035482 3430 1.697 - - - - - - 0.716 0.981 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
13. DENND1A ENSGALG00000001157 503 1.695 - - - - - - 0.703 0.992 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
14. SP3 ENSGALG00000031796 8997 1.675 - - 0.866 - - - 0.809 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
15. THAP5 ENSGALG00000009494 6540 1.675 - - 0.721 - - - - 0.954 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
16. SLIT2 ENSGALG00000041121 3223 1.651 - - 0.720 - - - - 0.931 - - slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
17. SUCLG2 ENSGALG00000007652 9688 1.634 - - 0.826 - - - 0.808 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
18. SH3GLB1 ENSGALG00000006284 12764 1.633 - - - - - - 0.705 0.928 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
19. DHX38 ENSGALG00000000787 6913 1.628 - - - - - - 0.737 0.891 - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
20. THUMPD3 ENSGALG00000008394 17711 1.627 - - - - - - 0.733 0.894 - - THUMP domain containing 3, transcript variant X2
21. DHRS7 ENSGALG00000011921 4470 1.624 - - - - - - 0.722 0.902 - - dehydrogenase/reductase 7 [Source:HGNC Symbol;Acc:HGNC:21524]
22. WDR12 ENSGALG00000008470 7654 1.609 - - 0.777 - - - - 0.832 - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
23. C1H12ORF4 2696 1.591 - - 0.774 - - - 0.817 - - - chromosome 1 open reading frame, human C12orf4
24. RECQL ENSGALG00000013174 1323 1.583 - - 0.860 - - - 0.723 - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
25. NR2C1 ENSGALG00000011327 5109 1.581 - - 0.771 - - - 0.810 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
26. TNFAIP1 ENSGALG00000005715 3347 1.574 - - 0.796 - - - 0.778 - - - TNF alpha induced protein 1 [Source:NCBI gene;Acc:417672]
27. DCUN1D1 ENSGALG00000008807 6545 1.573 - - 0.819 - - - 0.754 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
28. WDR3 ENSGALG00000014791 5856 1.56 - - 0.710 - - - 0.850 - - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
29. LGR4 ENSGALG00000040834 5529 1.558 - - 0.835 - - - - 0.723 - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
30. GMPPB ENSGALG00000002500 9454 1.556 - - 0.704 - - - 0.852 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
31. CA9 ENSGALG00000021340 1431 1.556 - - 0.852 - - - 0.704 - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
32. TFAP2C ENSGALG00000007690 768 1.555 - - 0.842 - - - 0.713 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
33. EAPP ENSGALG00000010007 5080 1.534 - - 0.796 - - - 0.738 - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
34. SCML2 ENSGALG00000016537 9348 1.531 - - 0.717 - - - - 0.814 - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
35. PICK1 ENSGALG00000041823 3843 1.498 - - 0.790 - - - 0.708 - - - protein interacting with PRKCA 1 [Source:HGNC Symbol;Acc:HGNC:9394]
36. NDUFC2 ENSGALG00000029172 26136 1.479 - - 0.765 - - - 0.714 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
37. C2H6orf52 ENSGALG00000012721 3631 1.478 - - 0.719 - - - 0.759 - - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
38. CXXC5 ENSGALG00000000884 16351 1.453 - - 0.746 - - - - 0.707 - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
39. WSB2 ENSGALG00000008151 13246 1.442 - - 0.727 - - - - - - 0.715 WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
40. C17orf75 ENSGALG00000003434 4262 1.432 - - 0.702 - - - - 0.730 - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
41. METTL23 ENSGALG00000001790 7906 1.431 - - - - - - 0.709 0.722 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
42. BIRC6 ENSGALG00000010541 7999 1.428 - - - - - - 0.716 0.712 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
43. TMEM245 ENSGALG00000013138 501 0.993 - - - - - - - 0.993 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
44. ARNT ENSGALG00000000751 3495 0.991 - - - - - - - 0.991 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
45. FNDC5 ENSGALG00000003567 3328 0.991 - - - - - - - 0.991 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
46. PIK3R3 ENSGALG00000010335 374 0.991 - - - - - - - 0.991 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
47. LAMA4 ENSGALG00000015001 993 0.991 - - - - - - - 0.991 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
48. GAS6 ENSGALG00000016820 481 0.991 - - - - - - - 0.991 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
49. RIPK1 ENSGALG00000012827 3405 0.991 - - - - - - - 0.991 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
50. SEMA7A ENSGALG00000001412 1505 0.991 - - - - - - - 0.991 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
51. PLEKHA3 ENSGALG00000009135 1700 0.991 - - - - - - - 0.991 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
52. PTER ENSGALG00000008728 162 0.99 - - - - - - - 0.990 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
53. GALNT2 ENSGALG00000011106 167 0.99 - - - - - - - 0.990 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
54. gga-mir-1723 ENSGALG00000025386 6662 0.99 - - - - - - - 0.990 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
55. C14orf105 C14orf105 135 0.99 - - - - - - - 0.990 - -
56. MYO3A ENSGALG00000007647 643 0.99 - - - - - - - 0.990 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
57. ILKAP ENSGALG00000006253 7388 0.99 - - - - - - - 0.990 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
58. PTN ENSGALG00000040493 864 0.99 - - - - - - - 0.990 - - pleiotrophin [Source:NCBI gene;Acc:418125]
59. ENSGALG00000029113 ENSGALG00000029113 737 0.99 - - - - - - - 0.990 - -
60. FAAH ENSGALG00000010433 3309 0.99 - - - - - - - 0.990 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
61. RFLB RFLB 140 0.99 - - - - - - - 0.990 - -
62. MMP16 ENSGALG00000032031 827 0.99 - - - - - - - 0.990 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
63. HNRNPK ENSGALG00000012591 1109 0.99 - - - - - - - 0.990 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
64. H2AFY2 ENSGALG00000004794 576 0.99 - - - - - - - 0.990 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
65. PCP4 ENSGALG00000022819 880 0.99 - - - - - - - 0.990 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
66. AEN ENSGALG00000044204 2633 0.989 - - - - - - - 0.989 - - apoptosis enhancing nuclease, transcript variant X1
67. ARHGAP32 ENSGALG00000043511 7916 0.989 - - - - - - - 0.989 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
68. ARHGEF12 ENSGALG00000006663 1369 0.989 - - - - - - - 0.989 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
69. SPRYD7 ENSGALG00000017010 1910 0.989 - - - - - - - 0.989 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
70. LEMD2 ENSGALG00000002870 2803 0.989 - - - - - - - 0.989 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
71. LIN28A ENSGALG00000036022 542 0.989 - - - - - - - 0.989 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
72. ARRDC2 ENSGALG00000003527 1797 0.989 - - - - - - - 0.989 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
73. KLHL13 KLHL13 2712 0.989 - - - - - - - 0.989 - -
74. TMEM237 ENSGALG00000008381 1317 0.989 - - - - - - - 0.989 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
75. CDK14 ENSGALG00000009062 995 0.988 - - - - - - - 0.988 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
76. LTN1 ENSGALG00000015804 3784 0.988 - - - - - - - 0.988 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
77. SKIV2L2 ENSGALG00000014709 2926 0.988 - - - - - - - 0.988 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
78. ETAA1 ENSGALG00000027922 1684 0.988 - - - - - - - 0.988 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
79. ARID1B ENSGALG00000013683 3397 0.988 - - - - - - - 0.988 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
80. NPB NPB 8056 0.987 - - - - - - - 0.987 - -
81. C2CD5 ENSGALG00000013210 3060 0.987 - - - - - - - 0.987 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
82. SRFBP1 ENSGALG00000005316 6826 0.987 - - - - - - - 0.987 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
83. THBS4 ENSGALG00000014804 4228 0.986 - - - - - - - 0.986 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
84. ARL1 ENSGALG00000011651 3230 0.986 - - - - - - - 0.986 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
85. PSD2 ENSGALG00000030836 236 0.986 - - - - - - - 0.986 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
86. PALD1 ENSGALG00000004465 3553 0.985 - - - - - - - 0.985 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
87. C1orf123 ENSGALG00000026516 3227 0.985 - - - - - - - 0.985 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
88. PLPPR1 ENSGALG00000015542 3179 0.985 - - - - - - - 0.985 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
89. B4GALT3 ENSGALG00000022891 2825 0.984 - - - - - - - 0.984 - - beta-1,4-galactosyltransferase 3
90. GATAD2A ENSGALG00000042900 6337 0.984 - - - - - - - 0.984 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
91. ENSGALG00000007355 ENSGALG00000007355 2149 0.984 - - - - - - - 0.984 - -
92. C4H4ORF41 C4H4ORF41 1520 0.984 - - - - - - - 0.984 - -
93. CDXB CDXB 143 0.983 - - - - - - - 0.983 - -
94. TMEM144 ENSGALG00000026253 1744 0.983 - - - - - - - 0.983 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
95. LDLRAP1 ENSGALG00000001051 1657 0.983 - - - - - - - 0.983 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
96. SEMA5B ENSGALG00000011686 4184 0.983 - - - - - - - 0.983 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
97. SGPL1 ENSGALG00000004553 4520 0.983 - - - - - - - 0.983 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
98. MEIS1 ENSGALG00000041626 3865 0.983 - - - - - - - 0.983 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
99. PRPSAP2 ENSGALG00000005064 5549 0.982 - - - - - - - 0.982 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
100. HTRA1 ENSGALG00000041140 1750 0.982 - - - - - - - 0.982 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]

There are 702 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA