Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLX4

Gene Name Gene ID Reads Annotation
SLX4 ENSGALG00000031841 1208 SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]











Genes with expression patterns similar to SLX4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLX4 ENSGALG00000031841 1208 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
2. MRPS9 ENSGALG00000016794 5875 1.545 - - - - - - - 0.783 0.762 - mitochondrial ribosomal protein S9 [Source:NCBI gene;Acc:418723]
3. LIPA ENSGALG00000006378 4414 0.997 - - - - - - - 0.997 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
4. RASGEF1B 2014 0.996 - - - - - - - 0.996 - - RasGEF domain family member 1B, transcript variant X8
5. CAPN9 158 0.996 - - - - - - - 0.996 - - calpain 9
6. LOC420160 ENSGALG00000004252 188 0.996 - - - - - - - 0.996 - - cathepsin L1-like, transcript variant X3
7. SLC26A8 ENSGALG00000040498 253 0.996 - - - - - - - 0.996 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
8. NCS1 ENSGALG00000012710 1104 0.996 - - - - - - - 0.996 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
9. KPNA4 ENSGALG00000009549 3674 0.996 - - - - - - - 0.996 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
10. VASH1 ENSGALG00000043036 1235 0.996 - - - - - - - 0.996 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
11. TOR1B TOR1B 197 0.996 - - - - - - - 0.996 - -
12. FPGT ENSGALG00000026958 788 0.996 - - - - - - - 0.996 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
13. YTHDF3 ENSGALG00000039774 170 0.996 - - - - - - - 0.996 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
14. ENSGALG00000001591 ENSGALG00000001591 784 0.996 - - - - - - - 0.996 - -
15. NKX-6.2 NKX-6.2 1370 0.995 - - - - - - - 0.995 - -
16. WNK2 ENSGALG00000038850 4712 0.995 - - - - - - - 0.995 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
17. NR3C2 ENSGALG00000010035 603 0.995 - - - - - - - 0.995 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
18. SETD2 ENSGALG00000042051 2981 0.995 - - - - - - - 0.995 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
19. SEMA3F ENSGALG00000029621 2079 0.995 - - - - - - - 0.995 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
20. CAPRIN2 1473 0.995 - - - - - - - 0.995 - - caprin family member 2, transcript variant X7
21. FTSJ2 FTSJ2 2951 0.994 - - - - - - - 0.994 - -
22. TBCE ENSGALG00000013950 3076 0.993 - - - - - - - 0.993 - - tubulin folding cofactor E
23. GNE ENSGALG00000015331 1577 0.993 - - - - - - - 0.993 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
24. HIP1R ENSGALG00000031511 1981 0.992 - - - - - - - 0.992 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
25. GNB1L ENSGALG00000001925 1981 0.992 - - - - - - - 0.992 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
26. FGD5 ENSGALG00000008546 4031 0.99 - - - - - - - 0.990 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
27. CHST2 ENSGALG00000034507 6172 0.989 - - - - - - - 0.989 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
28. HMOX1 ENSGALG00000012550 1186 0.989 - - - - - - - 0.989 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
29. C2CD2 ENSGALG00000016148 2734 0.989 - - - - - - - 0.989 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
30. AARSD1 ENSGALG00000002880 3068 0.989 - - - - - - - 0.989 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
31. PLA2G7 ENSGALG00000016713 2100 0.989 - - - - - - - 0.989 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
32. FNTA ENSGALG00000015397 3741 0.989 - - - - - - - 0.989 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
33. CXorf23 1582 0.988 - - - - - - - 0.988 - - chromosome X open reading frame 23, transcript variant X3
34. ENSGALG00000005615 ENSGALG00000005615 4354 0.987 - - - - - - - 0.987 - -
35. MAP4K5 ENSGALG00000012321 3036 0.987 - - - - - - - 0.987 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
36. TLN2 2295 0.987 - - - - - - - 0.987 - - talin 2, transcript variant X5
37. UBE2Q2 3861 0.986 - - - - - - - 0.986 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
38. EXOSC1 ENSGALG00000039917 5259 0.986 - - - - - - - 0.986 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
39. C5orf63 C5orf63 3718 0.985 - - - - - - - 0.985 - -
40. WDR82 ENSGALG00000025904 4783 0.984 - - - - - - - 0.984 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
41. PAM16 9684 0.984 - - - - - - - 0.984 - - presequence translocase associated motor 16 homolog, transcript variant X2
42. POLDIP2 ENSGALG00000003211 11664 0.984 - - - - - - - 0.984 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
43. HVCN1 ENSGALG00000004562 2550 0.983 - - - - - - - 0.983 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
44. DLGAP4 ENSGALG00000001046 6872 0.983 - - - - - - - 0.983 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
45. UTP23 ENSGALG00000032400 3601 0.982 - - - - - - - 0.982 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
46. VPS26A ENSGALG00000004174 9198 0.98 - - - - - - - 0.980 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
47. MRPL10 ENSGALG00000014387 12386 0.98 - - - - - - - 0.980 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
48. CABLES1 ENSGALG00000014998 1636 0.98 - - - - - - - 0.980 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
49. FGD3 ENSGALG00000005237 4410 0.978 - - - - - - - 0.978 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
50. CTSA ENSGALG00000006876 5380 0.978 - - - - - - - 0.978 - - cathepsin A [Source:NCBI gene;Acc:428163]
51. RABL5 RABL5 5264 0.977 - - - - - - - 0.977 - -
52. ITCH ENSGALG00000040474 2646 0.976 - - - - - - - 0.976 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
53. C1orf21 ENSGALG00000020922 4035 0.975 - - - - - - - 0.975 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
54. EMC1 ENSGALG00000003969 6876 0.974 - - - - - - - 0.974 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
55. CPEB2 ENSGALG00000014516 1187 0.973 - - - - - - - 0.973 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
56. TAF12 ENSGALG00000000991 8709 0.972 - - - - - - - 0.972 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
57. TARS ENSGALG00000003288 12702 0.968 - - - - - - - 0.968 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
58. WDR45B ENSGALG00000001563 5870 0.967 - - - - - - - 0.967 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
59. ENSGALG00000020092 ENSGALG00000020092 3067 0.966 - - - - - - - 0.966 - -
60. AKR1B10L3 ENSGALG00000019284 5869 0.965 - - - - - - - 0.965 - - aldo-keto reductase family 1 member B10-like 3
61. C10orf11 C10orf11 3087 0.965 - - - - - - - 0.965 - -
62. MBNL2 ENSGALG00000016890 3162 0.964 - - - - - - - 0.964 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
63. UBE2J2 ENSGALG00000001848 6527 0.963 - - - - - - - 0.963 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
64. METTL6 ENSGALG00000040665 4467 0.96 - - - - - - - 0.960 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
65. TYW3 ENSGALG00000032549 4869 0.959 - - - - - - - 0.959 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
66. CDC73 ENSGALG00000002469 4586 0.959 - - - - - - - 0.959 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
67. MRPL28 ENSGALG00000007473 19134 0.958 - - - - - - - 0.958 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
68. PHF20L1 ENSGALG00000033205 7598 0.949 - - - - - - - 0.949 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
69. SRPK2 ENSGALG00000008154 7385 0.949 - - - - - - - 0.949 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
70. SRP9 ENSGALG00000026009 12418 0.947 - - - - - - - 0.947 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
71. PCDH1 ENSGALG00000002553 2938 0.946 - - - - - - - 0.946 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
72. TCEA2 ENSGALG00000005976 9143 0.946 - - - - - - - 0.946 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
73. POLR2C ENSGALG00000001168 10703 0.942 - - - - - - - 0.942 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
74. TNRC6A ENSGALG00000006068 9166 0.94 - - - - - - - 0.940 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
75. LUC7L3 ENSGALG00000007386 11944 0.928 - - - - - - - 0.928 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
76. NPEPL1 ENSGALG00000007533 5908 0.922 - - - - - - - 0.922 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
77. THOC2 ENSGALG00000008507 9501 0.919 - - - - - - - 0.919 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
78. HIPK3 ENSGALG00000011695 6842 0.918 - - - - - - - 0.918 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
79. APPBP2 ENSGALG00000005314 6447 0.896 - - - - - - - 0.896 - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
80. COX16 ENSGALG00000020449 5959 0.892 - - - - - - - 0.892 - - cytochrome c oxidase assembly factor COX16 [Source:NCBI gene;Acc:423257]
81. ASPM ENSGALG00000032398 12784 0.888 - - - - - - - 0.888 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
82. FBXO4 ENSGALG00000014851 2333 0.885 - - - - - - - 0.885 - - F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]
83. NID2 ENSGALG00000012394 6717 0.884 - - - - - - - 0.884 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
84. ZNF451 ENSGALG00000016282 3380 0.882 - - - - - - - 0.882 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
85. TICRR ENSGALG00000006631 495 0.881 - - - - - - - - 0.881 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
86. RALBP1 ENSGALG00000008405 13780 0.879 - - - - - - - 0.879 - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
87. ARIH2 ENSGALG00000006956 3692 0.877 - - - - - - - 0.877 - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
88. C3orf14 ENSGALG00000007182 758 0.866 - - - - - - - - 0.866 - chromosome 3 open reading frame 14 [Source:HGNC Symbol;Acc:HGNC:25024]
89. GPHN ENSGALG00000009587 3045 0.865 - - - - - - - 0.865 - - gephyrin [Source:NCBI gene;Acc:428878]
90. MOB4 ENSGALG00000008128 10322 0.865 - - - - - - - 0.865 - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
91. ENSGALG00000027849 ENSGALG00000027849 320 0.863 - - - - - - - - 0.863 -
92. gga-mir-1610 ENSGALG00000025580 3985 0.861 - - - - - - - 0.861 - - gga-mir-1610 [Source:miRBase;Acc:MI0007338]
93. OCC-1 OCC-1 1887 0.861 - - - - - - - 0.861 - -
94. MTO1 ENSGALG00000015923 4418 0.859 - - - - - - - 0.859 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
95. FBXL8 ENSGALG00000003201 847 0.855 - - - - - - - - 0.855 - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
96. KMT2C 6306 0.854 - - - - - - - 0.854 - - lysine methyltransferase 2C, transcript variant X14
97. NPM3 ENSGALG00000032329 21138 0.854 - - - - - - - 0.854 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
98. ENSGALG00000007574 ENSGALG00000007574 7695 0.853 - - - - - - - 0.853 - -
99. METTL4 ENSGALG00000014799 411 0.852 - - - - - - - - 0.852 - methyltransferase like 4 [Source:HGNC Symbol;Acc:HGNC:24726]
100. CCT8 ENSGALG00000015821 12161 0.849 - - - - - - - 0.849 - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA