Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SLITRK4

Gene Name Gene ID Reads Annotation
SLITRK4 ENSDARG00000079781 54 SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]










Genes with expression patterns similar to SLITRK4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SLITRK4 ENSDARG00000079781 54 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
2. ATP6AP1L ATP6AP1L 164 2.859 - 1.000 - - - 0.895 0.964 - -
3. CNTNAP3 ENSDARG00000067824 25 2.615 - 1.000 - - - 0.774 0.841 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
4. calca ENSDARG00000056590 150 2.529 0.799 - - - - 0.819 0.911 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
5. CRIP2 ENSDARG00000070670 323 2.529 - 0.885 - - - 0.919 0.725 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
6. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.517 - 0.714 - - - 0.897 0.906 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
7. si:ch211-26b3.4 ENSDARG00000075491 50 2.477 1.000 - - - - 0.702 0.775 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
8. ntrk2a ENSDARG00000059897 185 2.462 - 0.790 - - - 0.872 0.800 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
9. DLGAP2 DLGAP2 36 2.432 - 1.000 - - - 0.714 0.718 - -
10. rab39b rab39b 449 2.421 0.728 - - - - 0.892 0.801 - -
11. cdh7 582 2.388 0.731 - - - - 0.777 0.880 - - cadherin 7, type 2, transcript variant X1
12. sox14 ENSDARG00000070929 352 2.326 - 0.714 - - - 0.796 0.816 - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
13. skor1b ENSDARG00000062448, ENSDARG00000112341 282 2.298 - 0.714 - - - 0.832 0.752 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
14. CDK5R1 CDK5R1 562 2.281 - 0.728 - - - 0.826 0.727 - -
15. ppfia4 ENSDARG00000053205 276 2.219 0.743 - - - - 0.749 0.727 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070720-14]
16. CABZ01090303.1 CABZ01090303.1 2 2 1.000 1.000 - - - - - - -
17. BRINP3 BRINP3 11 2 1.000 - - - - - 1.000 - -
18. CU457819.2 ENSDARG00000105374 8 2 1.000 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
19. wisp1a ENSDARG00000054331 26 2 1.000 1.000 - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
20. lgi3 ENSDARG00000041358 46 2 - 1.000 - - - - 1.000 - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
21. lonrf1 ENSDARG00000075048 13 2 1.000 1.000 - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
22. TRIM14_10 TRIM14_10 9 2 1.000 1.000 - - - - - - -
23. zgc:113397 zgc:113397 60 2 1.000 1.000 - - - - - - -
24. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 2 1.000 - - - - - 1.000 - -
25. VDAC3 ENSDARG00000003695 34 2 1.000 1.000 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
26. dync1i1 ENSDARG00000060948 554 1.948 - - - - - 0.972 0.976 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
27. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.946 - - - - - 0.952 0.994 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
28. cacng8a ENSDARG00000020450 32 1.94 1.000 - - - - - 0.940 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
29. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.938 - 1.000 - - - 0.938 - - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
30. KCNAB3 KCNAB3 134 1.927 - 1.000 - - - - 0.927 - -
31. her8.2 ENSDARG00000069675 315 1.906 - - - - - 0.945 0.961 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
32. zgc:194665 ENSDARG00000004577 136 1.905 - - - - - 0.944 0.961 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
33. sult4a1 ENSDARG00000101967 205 1.901 - - - - - 0.981 0.920 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
34. CR538726.1 ENSDARG00000097179 321 1.895 - 1.000 - - - - 0.895 - -
35. CABZ01087549.1 CABZ01087549.1 108 1.891 1.000 - - - - - 0.891 - -
36. GRIN3A ENSDARG00000075802 27 1.891 - - - - - 0.978 0.913 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
37. pou3f2a ENSDARG00000070220 817 1.887 - 1.000 - - - 0.887 - - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
38. c1qtnf4 ENSDARG00000024299 578 1.875 0.921 - - - - - 0.954 - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
39. her4.3 ENSDARG00000070770 613 1.875 - - - - - 0.938 0.937 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
40. bai3 bai3 92 1.871 - 1.000 - - - 0.871 - - -
41. gng3 ENSDARG00000009553 2530 1.86 - - - - - 0.970 0.890 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
42. AL935029.1 AL935029.1 514 1.857 - - - - - 0.934 0.923 - -
43. cspg5a ENSDARG00000069981 1699 1.851 - - - - - 0.952 0.899 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
44. scn2b ENSDARG00000101713 796 1.848 - - - - - 0.933 0.915 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
45. RNF208 ENSDARG00000078056 60 1.848 - - - - - 0.908 0.940 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
46. prdm13 ENSDARG00000078701 205 1.842 - - - - - 0.842 1.000 - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
47. GADD45G_1 GADD45G_1 236 1.842 - - - - - 0.894 0.948 - -
48. zgc:195633_1 142 1.841 1.000 - - - - - 0.841 - - zgc:195633
49. CIT_1 CIT_1 6 1.841 - 1.000 - - - - 0.841 - -
50. rag2 ENSDARG00000052121 15 1.841 1.000 - - - - - 0.841 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
51. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1.841 - 1.000 - - - - 0.841 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
52. fbxo41 ENSDARG00000078908 95 1.839 - - - - - 0.954 0.885 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
53. plekho1a ENSDARG00000061191 98 1.838 - 1.000 - - - 0.838 - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
54. slc35g2b ENSDARG00000045447 378 1.837 - - - - - 0.922 0.915 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
55. celf4 ENSDARG00000070045 1537 1.834 - - - - - 0.927 0.907 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
56. nhlh2 ENSDARG00000025495 1860 1.833 - - - - - 0.928 0.905 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
57. dbx2 2971 1.833 - - - - - 0.966 0.867 - - developing brain homeobox 2
58. NPTXR NPTXR 241 1.831 - - - - - 0.953 0.878 - -
59. CR407704.1 CR407704.1 188 1.826 - - - - - 0.847 0.979 - -
60. GADD45G GADD45G 382 1.821 - - - - - 0.866 0.955 - -
61. cxxc4 ENSDARG00000077817 197 1.817 1.000 - - - - - 0.817 - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
62. vsnl1b ENSDARG00000044053 1120 1.815 - - - - - 0.904 0.911 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
63. cacng3b ENSDARG00000076401 91 1.814 - - - - - 0.935 0.879 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
64. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.812 - - - - - 0.908 0.904 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
65. CR848045.1 CR848045.1 459 1.811 - - - - - 0.911 0.900 - -
66. elavl4 ENSDARG00000045639 998 1.809 - - - - - 0.913 0.896 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
67. SPOCK1 ENSDARG00000074644 794 1.808 - - - - - 0.934 0.874 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
68. sall3b ENSDARG00000057586 982 1.808 - - - - - 0.895 0.913 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
69. nxph1 ENSDARG00000033447 182 1.808 - 0.946 - - - - 0.862 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
70. sept5b ENSDARG00000036031 188 1.806 - 1.000 - - - - 0.806 - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
71. trim36 ENSDARG00000062794 785 1.806 - - - - - 0.893 0.913 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
72. ptx3a ENSDARG00000068275 589 1.805 1.000 - - - - - 0.805 - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
73. slc12a5b ENSDARG00000078187 329 1.804 - - - - - 0.915 0.889 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
74. TTBK1_1 TTBK1_1 132 1.804 - 0.903 - - - - 0.901 - -
75. nadl1.1 1200 1.8 - - - - - 0.861 0.939 - - neural adhesion molecule L1.1, transcript variant X1
76. EPB41L1 EPB41L1 1896 1.799 - - - - - 0.973 0.826 - -
77. TUSC3 ENSDARG00000078854 1021 1.797 - - - - - 0.933 0.864 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
78. cadpsb ENSDARG00000070567 458 1.796 - - - - - 0.908 0.888 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
79. gabrg2 ENSDARG00000053665 434 1.796 - - - - - 0.939 0.857 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
80. itm2ca ENSDARG00000043448 1265 1.795 - - - - - 0.867 0.928 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
81. sprn ENSDARG00000056004 128 1.794 - - - - - 0.852 0.942 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
82. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.789 - - - - - 0.870 0.919 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
83. neflb ENSDARG00000012426 298 1.788 - - - - - 0.860 0.928 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
84. kiaa1549la ENSDARG00000062477 143 1.787 0.823 - - - - - 0.964 - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
85. TMEM57 TMEM57 260 1.787 1.000 - - - - - 0.787 - -
86. cx35b cx35b 63 1.786 0.925 - - - - - 0.861 - -
87. slc8a2b ENSDARG00000100592 598 1.786 - - - - - 0.959 0.827 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
88. elavl3 ENSDARG00000014420 8644 1.784 - - - - - 0.904 0.880 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
89. znf804a ENSDARG00000027079 121 1.78 - - - - - 0.990 0.790 - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
90. map6 map6 70 1.777 - - - - - 0.867 0.910 - -
91. ckbb ENSDARG00000043257 3503 1.771 - - - - - 0.877 0.894 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
92. lhfpl3 ENSDARG00000021595 107 1.771 - 1.000 - - - 0.771 - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
93. gnai3 ENSDARG00000030644 29 1.77 1.000 - - - 0.770 - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
94. TUBB8P7_2 TUBB8P7_2 565 1.768 - - - - - 0.930 0.838 - -
95. pcp4b 1080 1.767 - - - - - 0.888 0.879 - - Purkinje cell protein 4b
96. cuedc1a ENSDARG00000068716 232 1.764 - - - - - 0.801 0.963 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
97. diras1a ENSDARG00000028066 126 1.763 - - - - - 0.784 0.979 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
98. APBB3 ENSDARG00000053771 654 1.762 - - - - - 0.845 0.917 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
99. rhpn1 ENSDARG00000052454 3 1.761 1.000 - - - 0.761 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
100. svopa ENSDARG00000056833 14 1.761 - 1.000 - - 0.761 - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]

There are 1989 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA