Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC6A4

Gene Name Gene ID Reads Annotation
SLC6A4 ENSGALG00000004246 5 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]











Genes with expression patterns similar to SLC6A4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC6A4 ENSGALG00000004246 5 4 - - 1.000 1.000 - - - 1.000 - 1.000 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
2. SLC6A20 ENSGALG00000039333 1 1.957 - - 0.957 - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
3. ADCY7 ENSGALG00000003837 10 1.922 - - 0.922 - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
4. NIM1 NIM1 18 1.855 - - 0.855 - - - - 1.000 - -
5. CALCA CALCA 682 1.786 - - - 0.824 - - - 0.962 - -
6. SLC36A4 ENSGALG00000017227 3 1.695 - - 0.957 0.738 - - - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
7. AMMECR1 ENSGALG00000008074 5 1.65 - - - 0.738 - - - - - 0.912 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
8. MTMR4 ENSGALG00000001042 4 1.639 - - 0.901 0.738 - - - - - - myotubularin related protein 4 [Source:HGNC Symbol;Acc:HGNC:7452]
9. MLC1 ENSGALG00000040038 206 1.54 - - - 0.754 - - - - - 0.786 megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
10. NDEL1 ENSGALG00000001163 16 1.516 - - 0.737 - - - - - - 0.779 Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
11. WDR16 WDR16 22 1.506 - - - 0.738 - - - - - 0.768
12. CR1L ENSGALG00000023950 98 1.489 - - - 0.738 - - - - - 0.751 complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
13. GRM1 ENSGALG00000012297 41 1 - - - - - - - - - 1.000 glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
14. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
15. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
16. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
17. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
18. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
19. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
20. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
21. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
22. CNKSR2L ENSGALG00000007028 4 1 - - - - - - - - - 1.000 connector enhancer of kinase suppressor of Ras 2-like
23. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
24. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
25. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
26. gga-mir-218-1 ENSGALG00000018327 3 1 - - - - - - - 1.000 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
27. TMPRSS2 ENSGALG00000016144 138 1 - - 1.000 - - - - - - - transmembrane serine protease 2 [Source:HGNC Symbol;Acc:HGNC:11876]
28. SKI ENSGALG00000001229 50 1 - - - - - - - 1.000 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
29. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
30. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
31. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
32. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
33. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
34. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
35. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
36. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
37. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
38. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
39. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
40. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
41. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
42. RAD54L ENSGALG00000010356 7 1 - - - - - - - 1.000 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
43. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
44. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
45. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
46. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
47. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
48. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
49. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
50. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
51. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
52. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
53. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
54. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
55. ENSGALG00000022967 ENSGALG00000022967 240 1 - - - - - - - 1.000 - -
56. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
57. LICOS LICOS 13 1 - - - - - - - 1.000 - -
58. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
59. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
60. GTF2E1L ENSGALG00000013600 4 1 - - - - - - - - - 1.000 general transcription factor IIE subunit 1-like
61. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
62. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
63. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
64. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
65. ENSGALG00000029029 ENSGALG00000029029 10 1 - - - - - - - - - 1.000
66. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
67. IL8 ENSGALG00000026098 16 1 - - - - - - - 1.000 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
68. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
69. PAPPA ENSGALG00000007079 6 1 - - - - - - - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
70. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
71. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
72. CD274 1 1 - - - - - - - - - 1.000 CD274 molecule, transcript variant X4
73. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
74. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
75. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
76. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
77. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
78. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
79. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
80. CRIP2 ENSGALG00000026471 4 1 - - 1.000 - - - - - - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
81. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
82. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
83. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
84. STMN2 ENSGALG00000039690 989 1 - - - - - - - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
85. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
86. COL4A3 ENSGALG00000038612 41 1 - - - - - - - 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
87. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
88. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
89. CERS1 ENSGALG00000003160 3 1 - - - - - - - - - 1.000 ceramide synthase 1 [Source:NCBI gene;Acc:420118]
90. RMST RMST 2 1 - - - - - - - 1.000 - -
91. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
92. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
93. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
94. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
95. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
96. VNN1 ENSGALG00000013993 11 1 - - - - - - - - - 1.000 vanin 1 [Source:NCBI gene;Acc:421702]
97. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
98. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
99. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
100. MICALL2 ENSGALG00000004070 23 1 - - - - - - - 1.000 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA