Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC6A4

Gene Name Gene ID Reads Annotation
SLC6A4 ENSGALG00000004246 5 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]











Genes with expression patterns similar to SLC6A4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC6A4 ENSGALG00000004246 5 4 - - 1.000 1.000 - - - 1.000 - 1.000 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
2. SLC6A20 ENSGALG00000039333 1 1.957 - - 0.957 - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
3. ADCY7 ENSGALG00000003837 10 1.922 - - 0.922 - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
4. NIM1 NIM1 18 1.855 - - 0.855 - - - - 1.000 - -
5. CALCA CALCA 682 1.786 - - - 0.824 - - - 0.962 - -
6. SLC36A4 ENSGALG00000017227 3 1.695 - - 0.957 0.738 - - - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
7. AMMECR1 ENSGALG00000008074 5 1.65 - - - 0.738 - - - - - 0.912 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
8. MTMR4 ENSGALG00000001042 4 1.639 - - 0.901 0.738 - - - - - - myotubularin related protein 4 [Source:HGNC Symbol;Acc:HGNC:7452]
9. MLC1 ENSGALG00000040038 206 1.54 - - - 0.754 - - - - - 0.786 megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
10. NDEL1 ENSGALG00000001163 16 1.516 - - 0.737 - - - - - - 0.779 Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
11. WDR16 WDR16 22 1.506 - - - 0.738 - - - - - 0.768
12. CR1L ENSGALG00000023950 98 1.489 - - - 0.738 - - - - - 0.751 complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
13. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
14. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
15. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
16. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
17. SLC6A17 ENSGALG00000000394 10 1 - - - - - - - - - 1.000 solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
18. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
19. CFD ENSGALG00000040832 222 1 - - - - - - - 1.000 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
20. CFTII CFTII 6 1 - - - - - - - 1.000 - -
21. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
22. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
23. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
24. ID3 ENSGALG00000035317 52 1 - - - - - - - 1.000 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
25. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
26. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
27. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
28. COTL1 ENSGALG00000017644 81 1 - - - - - - - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
29. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
30. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
31. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
32. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
33. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - - - 1.000 - -
34. FAM124A ENSGALG00000017016 0 1 - - - - - - - 1.000 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
35. FOXG1 ENSGALG00000036364 29 1 - - - - - - - 1.000 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
36. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
37. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
38. ERBB4 ENSGALG00000003126 1 1 - - - - - - - - - 1.000 erb-b2 receptor tyrosine kinase 4 [Source:NCBI gene;Acc:395671]
39. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
40. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
41. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
42. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
43. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
44. C2orf50 ENSGALG00000046449 17 1 - - - - - - - - - 1.000 chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
45. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
46. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
47. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
48. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
49. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
50. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
51. SCN4B ENSGALG00000007409 22 1 - - - - - - - 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
52. ABCG1 ENSGALG00000016164 10 1 - - - - - - - 1.000 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
53. FLT4 ENSGALG00000005802 5 1 - - - - - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
54. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
55. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
56. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
57. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
58. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
59. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
60. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
61. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
62. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
63. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
64. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
65. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
66. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
67. BLB1 ENSGALG00000000141 13 1 - - - - - - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
68. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
69. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
70. PCOLCE2 ENSGALG00000002623 8 1 - - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
71. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
72. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
73. SUSD5 ENSGALG00000042289 1 1 - - - - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
74. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
75. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
76. L3MBTL1 1 1 - - - - - - - - - 1.000 l(3)mbt-like 1 (Drosophila)
77. MYO1D ENSGALG00000000674 14 1 - - - - - - - 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
78. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
79. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
80. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
81. SLC6A6 ENSGALG00000006425 31 1 - - - - - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
82. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
83. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
84. HCLS1 ENSGALG00000039682 34 1 - - - - - - - - - 1.000 hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
85. PIFO ENSGALG00000023763 11 1 - - - - - - - - - 1.000 primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
86. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
87. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
88. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
89. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
90. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
91. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
92. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
93. BAFF BAFF 40 1 - - - - - - - 1.000 - -
94. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
95. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
96. ENSGALG00000026897 ENSGALG00000026897 6 1 - - - - - - - - - 1.000
97. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
98. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
99. ANKRD31 46 1 - - - - - - - 1.000 - - ankyrin repeat domain 31, transcript variant X2
100. FRMD4A ENSGALG00000034992 6 1 - - - - - - - 1.000 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA