Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC6A4

Gene Name Gene ID Reads Annotation
SLC6A4 ENSGALG00000004246 5 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]











Genes with expression patterns similar to SLC6A4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC6A4 ENSGALG00000004246 5 4 - - 1.000 1.000 - - - 1.000 - 1.000 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
2. SLC6A20 ENSGALG00000039333 1 1.957 - - 0.957 - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
3. ADCY7 ENSGALG00000003837 10 1.922 - - 0.922 - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
4. NIM1 NIM1 18 1.855 - - 0.855 - - - - 1.000 - -
5. CALCA CALCA 682 1.786 - - - 0.824 - - - 0.962 - -
6. SLC36A4 ENSGALG00000017227 3 1.695 - - 0.957 0.738 - - - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
7. AMMECR1 ENSGALG00000008074 5 1.65 - - - 0.738 - - - - - 0.912 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
8. MTMR4 ENSGALG00000001042 4 1.639 - - 0.901 0.738 - - - - - - myotubularin related protein 4 [Source:HGNC Symbol;Acc:HGNC:7452]
9. MLC1 ENSGALG00000040038 206 1.54 - - - 0.754 - - - - - 0.786 megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
10. NDEL1 ENSGALG00000001163 16 1.516 - - 0.737 - - - - - - 0.779 Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
11. WDR16 WDR16 22 1.506 - - - 0.738 - - - - - 0.768
12. CR1L ENSGALG00000023950 98 1.489 - - - 0.738 - - - - - 0.751 complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
13. ERBB4 ENSGALG00000003126 1 1 - - - - - - - - - 1.000 erb-b2 receptor tyrosine kinase 4 [Source:NCBI gene;Acc:395671]
14. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
15. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
16. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
17. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
18. COL27A1 ENSGALG00000006958 12 1 - - - - - - - - - 1.000 collagen type XXVII alpha 1 chain, transcript variant X5
19. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
20. TANC2 26 1 - - - - - - - 1.000 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
21. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
22. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
23. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
24. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
25. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
26. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
27. ENSGALG00000008047 ENSGALG00000008047 13 1 - - - - - - - 1.000 - -
28. CRIP2 ENSGALG00000026471 4 1 - - 1.000 - - - - - - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
29. RASSF7 ENSGALG00000044251 8 1 - - - - - - - - - 1.000 Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
30. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
31. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
32. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
33. PYROXD2 ENSGALG00000007014 14 1 - - - - - - - 1.000 - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
34. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
35. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
36. B2M ENSGALG00000002160 4 1 - - - - - - - 1.000 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
37. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
38. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
39. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
40. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
41. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
42. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
43. HCLS1 ENSGALG00000039682 34 1 - - - - - - - - - 1.000 hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
44. CNKSR2L ENSGALG00000007028 4 1 - - - - - - - - - 1.000 connector enhancer of kinase suppressor of Ras 2-like
45. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
46. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
47. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
48. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
49. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
50. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
51. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
52. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
53. C2orf50 ENSGALG00000046449 17 1 - - - - - - - - - 1.000 chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
54. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
55. L3MBTL1 1 1 - - - - - - - - - 1.000 l(3)mbt-like 1 (Drosophila)
56. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
57. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
58. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
59. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
60. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
61. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
62. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
63. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
64. SLC6A6 ENSGALG00000006425 31 1 - - - - - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
65. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
66. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
67. ENSGALG00000029029 ENSGALG00000029029 10 1 - - - - - - - - - 1.000
68. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
69. LICOS LICOS 13 1 - - - - - - - 1.000 - -
70. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
71. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
72. GALNT15 ENSGALG00000011235 1 1 - - - - - - - - - 1.000 polypeptide N-acetylgalactosaminyltransferase 15 [Source:HGNC Symbol;Acc:HGNC:21531]
73. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
74. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
75. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
76. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
77. ENSGALG00000027059 ENSGALG00000027059 7 1 - - - - - - - - - 1.000
78. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
79. ASB2 ENSGALG00000010881 4 1 - - - - - - - - - 1.000 ankyrin repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:16012]
80. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
81. PBEF1 PBEF1 25 1 - - - - - - - 1.000 - -
82. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
83. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
84. GTF2E1L ENSGALG00000013600 4 1 - - - - - - - - - 1.000 general transcription factor IIE subunit 1-like
85. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
86. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
87. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
88. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
89. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
90. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
91. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
92. CFTII CFTII 6 1 - - - - - - - 1.000 - -
93. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
94. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
95. UPK3B 4 1 - - - - - - - 1.000 - - uroplakin 3B
96. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
97. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
98. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
99. CERS1 ENSGALG00000003160 3 1 - - - - - - - - - 1.000 ceramide synthase 1 [Source:NCBI gene;Acc:420118]
100. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA