Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC6A13

Gene Name Gene ID Reads Annotation
SLC6A13 ENSGALG00000012985 194 solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]











Genes with expression patterns similar to SLC6A13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC6A13 ENSGALG00000012985 194 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
2. CYP3A4 ENSGALG00000004436 75 1.778 - - - - - - - 0.850 - 0.928 Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
3. CCDC102A ENSGALG00000029999 324 1.704 - - - - - - - 0.885 - 0.819 coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
4. PRKAA1 ENSGALG00000014832 547 1.682 - - - - - - - 0.823 - 0.859 protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
5. DNAH5L ENSGALG00000013268 61 1.658 - - - - - 0.748 0.910 - - - dynein axonemal heavy chain 5-like
6. GJB1 ENSGALG00000005541 261 1.64 - - - - - - 0.820 0.820 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
7. SLC7A5 ENSGALG00000005845 261 1.631 - - - - - - 0.827 0.804 - - solute carrier family 7 member 5 [Source:NCBI gene;Acc:415832]
8. PLXNC1 ENSGALG00000011309 69 1.602 - - - - - - - 0.858 - 0.744 plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
9. PIGG ENSGALG00000015349 314 1.537 - - - - - 0.823 0.714 - - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
10. FBXO32 ENSGALG00000041202 1066 1.531 - - - - - 0.747 - 0.784 - - F-box protein 32 [Source:NCBI gene;Acc:420343]
11. FAM149A ENSGALG00000013503 72 1.487 - - 0.773 - - - 0.714 - - - family with sequence similarity 149 member A [Source:HGNC Symbol;Acc:HGNC:24527]
12. CPN2 ENSGALG00000045776 18 0.969 - - - - - - - - - 0.969 carboxypeptidase N subunit 2
13. RANBP3L 19 0.969 - - - - - - - - - 0.969 RAN binding protein 3 like, transcript variant X2
14. LOC421584 ENSGALG00000011579 8 0.967 - - - - - - - - - 0.967 solute carrier family 22 member 2-like
15. RAP2C ENSGALG00000006061 11 0.964 - - - - - - - - - 0.964 RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
16. PITPNM2 ENSGALG00000003645 17 0.964 - - - - - - - - - 0.964 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
17. ENSGALG00000000188 ENSGALG00000000188 11 0.964 - - - - - - - - - 0.964
18. SLC39A8 ENSGALG00000012298 9 0.964 - - - - - - - - - 0.964 solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
19. LRRC2 ENSGALG00000013634 69 0.959 - - - - - - - - - 0.959 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
20. YTHDF1 ENSGALG00000005745 135 0.955 - - - - - - - - - 0.955 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
21. KIAA1045 KIAA1045 23 0.955 - - - - - - - - - 0.955
22. TTC28 ENSGALG00000005676 36 0.952 - - - - - - - - - 0.952 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
23. FAM105A ENSGALG00000012965 6 0.952 - - - - - - - - - 0.952 family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
24. PPP1R15B ENSGALG00000000611 412 0.948 - - - - - - - - - 0.948 protein phosphatase 1 regulatory subunit 15B [Source:HGNC Symbol;Acc:HGNC:14951]
25. PLCXD1 ENSGALG00000016721 289 0.946 - - - - - - - - - 0.946 phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
26. NUDT15 ENSGALG00000016994 210 0.944 - - - - - - - - - 0.944 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
27. RXFP1 ENSGALG00000009429 10 0.941 - - - - - - - - - 0.941 relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
28. ENSGALG00000000789 ENSGALG00000000789 24 0.935 - - - - - - - - - 0.935
29. URAH ENSGALG00000000549 484 0.932 - - - - - - - - - 0.932 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
30. PHF10 ENSGALG00000011192 361 0.929 - - - - - - - - - 0.929 PHD finger protein 10 [Source:HGNC Symbol;Acc:HGNC:18250]
31. SLC37A2 ENSGALG00000035842 1183 0.926 - - - - - - - - - 0.926 solute carrier family 37 member 2 [Source:HGNC Symbol;Acc:HGNC:20644]
32. CENPA ENSGALG00000037735 171 0.924 - - - - - - - - - 0.924 centromere protein A [Source:NCBI gene;Acc:100113359]
33. ZNF814 ZNF814 13 0.924 - - - - - - - - - 0.924
34. SHCBP1 ENSGALG00000004444 59 0.923 - - - - - - - - - 0.923 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
35. OIT3 ENSGALG00000004345 4886 0.921 - - - - - - - - - 0.921 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
36. ANKRD28 ENSGALG00000011226 160 0.918 - - - - - - - - - 0.918 ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
37. PCNXL4 PCNXL4 58 0.917 - - - - - - - - - 0.917
38. MKNK1 ENSGALG00000010440 196 0.911 - - - - - - - - - 0.911 MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
39. CBX7 ENSGALG00000041236 14 0.907 - - - - - - 0.907 - - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
40. IFT88 1241 0.904 - - - - - - - 0.904 - - intraflagellar transport 88, transcript variant X3
41. FRS2 ENSGALG00000009966 63 0.901 - - - - - - 0.901 - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
42. MMD2 ENSGALG00000004530 167 0.9 - - - - - - - 0.900 - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
43. LANCL1 ENSGALG00000002921 571 0.898 - - - - - - - 0.898 - - LanC like 1 [Source:NCBI gene;Acc:424006]
44. SI ENSGALG00000009511 5 0.897 - - - - - - 0.897 - - - sucrase-isomaltase
45. ENSGALG00000028577 ENSGALG00000028577 4 0.897 - - - - - - 0.897 - - -
46. CA15L ENSGALG00000005896 4 0.897 - - - - - - 0.897 - - - carbonic anhydrase 15-like
47. CHIC1 ENSGALG00000040956 1177 0.897 - - - - - - - - - 0.897 cysteine rich hydrophobic domain 1 [Source:NCBI gene;Acc:422318]
48. TEKT1 ENSGALG00000006064 18 0.897 - - - - - - 0.897 - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
49. BFSP1 ENSGALG00000008735 17 0.897 - - - - - - 0.897 - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
50. ASB18 ENSGALG00000046564 7 0.897 - - - - - - 0.897 - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
51. SLC6A11 ENSGALG00000004879 16 0.897 - - - - - - 0.897 - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
52. LEKR1 50 0.897 - - - - - - 0.897 - - - leucine, glutamate and lysine rich 1, transcript variant X17
53. NIM1 NIM1 18 0.897 - - - - - - 0.897 - - -
54. FHOD1 ENSGALG00000002198 426 0.895 - - - - - - - - - 0.895 formin homology 2 domain containing 1 [Source:NCBI gene;Acc:415672]
55. LY86 ENSGALG00000012801 865 0.894 - - - - - - - - - 0.894 lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
56. COG1 ENSGALG00000029893 4309 0.894 - - - - - - - 0.894 - - component of oligomeric golgi complex 1 [Source:NCBI gene;Acc:417449]
57. SPTY2D1 ENSGALG00000006355 994 0.893 - - - - - - - - - 0.893 SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
58. LHFPL5 ENSGALG00000039170 247 0.893 - - - - - - 0.893 - - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
59. SRGAP2 ENSGALG00000000816 97 0.89 - - - - - - - - - 0.890 SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
60. EIF4G1 ENSGALG00000008520 1241 0.889 - - - - - - - - - 0.889 eukaryotic translation initiation factor 4 gamma 1 [Source:HGNC Symbol;Acc:HGNC:3296]
61. LOX ENSGALG00000028063 1488 0.886 - - - - - - - 0.886 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
62. BRSK2 ENSGALG00000006681 158 0.884 - - - - - - 0.884 - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
63. GRIN1 ENSGALG00000008898 18 0.884 - - - - - - 0.884 - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
64. HMGCLL1 ENSGALG00000016294 33 0.884 - - - - - - 0.884 - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
65. ADRA1D ENSGALG00000038787 54 0.884 - - - - - - 0.884 - - - adrenoceptor alpha 1D
66. LRP3 ENSGALG00000004853 13 0.881 - - - - - - 0.881 - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
67. CABP2 ENSGALG00000037497 329 0.88 - - - - - - - - - 0.880 calcium binding protein 2 [Source:NCBI gene;Acc:429967]
68. VWA1 ENSGALG00000001527 79 0.88 - - - - - - - - - 0.880 von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
69. LOC416530 ENSGALG00000005291 207 0.88 - - - - - - - - - 0.880 uncharacterized LOC416530, transcript variant X1
70. MGMT ENSGALG00000042949 53 0.88 - - - - - - 0.880 - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
71. TRPC6 ENSGALG00000029416 281 0.88 - - - - - - - - - 0.880 transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
72. MAT2A ENSGALG00000015366 17 0.879 - - - - - - - 0.879 - - methionine adenosyltransferase 2A, transcript variant X1
73. PTDSS2 ENSGALG00000004300 682 0.876 - - - - - - - 0.876 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
74. ENSGALG00000023694 ENSGALG00000023694 45 0.876 - - - - - - 0.876 - - -
75. SAMSN1 ENSGALG00000040926 88 0.876 - - - - - - 0.876 - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
76. U2_1 U2_1 13 0.875 - - - - - - - - - 0.875
77. FBXL5 ENSGALG00000014510 245 0.874 - - - - - - 0.874 - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
78. SYNC ENSGALG00000003529 389 0.874 - - - - - - - - - 0.874 syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
79. KLHL32 68 0.872 - - - - - - - 0.872 - - kelch like family member 32, transcript variant X3
80. CARD8 ENSGALG00000007698 45 0.872 - - - - - - - - - 0.872 caspase recruitment domain family, member 8
81. KCTD20 ENSGALG00000000511 298 0.87 - - - - - - - - - 0.870 potassium channel tetramerization domain containing 20 [Source:HGNC Symbol;Acc:HGNC:21052]
82. LRRC8C ENSGALG00000006170 43 0.869 - - - - - - 0.869 - - - leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
83. PC7 PC7 1105 0.867 - - - - - - - 0.867 - -
84. LPHN3 LPHN3 41 0.867 - - - - - - - - - 0.867
85. SERPINF2 ENSGALG00000002987 236 0.866 - - - - - - - 0.866 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
86. WNT16 ENSGALG00000028069 157 0.865 - - - - - - - 0.865 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
87. NAAA ENSGALG00000011529 401 0.865 - - - - - - 0.865 - - - N-acylethanolamine acid amidase [Source:HGNC Symbol;Acc:HGNC:736]
88. RHOBTB1 ENSGALG00000003073 56 0.865 - - - - - - - - - 0.865 Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
89. OSBP ENSGALG00000030548 439 0.865 - - - - - - - 0.865 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
90. ST6GALNAC4 ENSGALG00000005063 1056 0.864 - - - - - - - - - 0.864 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
91. ENSGALG00000026913 ENSGALG00000026913 12 0.863 - - - - - - - 0.863 - -
92. ENSGALG00000026735 ENSGALG00000026735 5 0.863 - - - - - 0.863 - - - -
93. METTL24 ENSGALG00000041120 60 0.863 - - - - - - - 0.863 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
94. AVP ENSGALG00000014117 19 0.863 - - - - - - - 0.863 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
95. PTPRQ ENSGALG00000010935 626 0.861 - - - - - - - - - 0.861 protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
96. TGM4 ENSGALG00000033171 19 0.861 - - - - - - - 0.861 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
97. PIM3 ENSGALG00000023576 30 0.86 - - - - - - - - - 0.860 Pim-3 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:19310]
98. DNAJC16 ENSGALG00000032832 750 0.86 - - - - - - - - - 0.860 DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
99. FHL1 ENSGALG00000006190 22 0.86 - - - - - - - 0.860 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
100. LOC420160 ENSGALG00000004252 188 0.859 - - - - - - - - - 0.859 cathepsin L1-like, transcript variant X3

There are 367 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA