Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC6A1

Gene Name Gene ID Reads Annotation
SLC6A1 ENSGALG00000004921 118 solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]











Genes with expression patterns similar to SLC6A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC6A1 ENSGALG00000004921 118 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
2. C9H2ORF82 ENSGALG00000040264 4201 1.648 - - - - - - - 0.763 - 0.885 chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
3. PIK3C2G ENSGALG00000013117 53 1.609 - - - - - - - 0.882 - 0.727 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
4. TIMP3 ENSGALG00000028627 8706 1.572 - - - - - - - 0.761 - 0.811 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
5. FNDC1 ENSGALG00000011663 1040 1.56 - - - - - - - 0.783 - 0.777 fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
6. MAP2K3 ENSGALG00000041285 27 1.533 - - - - - 0.703 - 0.830 - - mitogen-activated protein kinase kinase 3 [Source:NCBI gene;Acc:416496]
7. PLD5 ENSGALG00000010737 5 1.481 - - - - - 0.767 - 0.714 - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
8. SIM1 ENSGALG00000015466 111 1.441 - - - - - - - 0.728 - 0.713 SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
9. SST ENSGALG00000007361 1383 1.431 - - - - - 0.724 - 0.707 - - somatostatin [Source:NCBI gene;Acc:396279]
10. COL9A3 ENSGALG00000005628 2842 1.417 - - - - - - - 0.713 - 0.704 collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
11. CCDC3 ENSGALG00000030140 258 0.932 - - - - - - - - - 0.932 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
12. OTOG ENSGALG00000006208 17 0.917 - - - - - - - 0.917 - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
13. DCLRE1B ENSGALG00000028626 48 0.9 - - - - - - - 0.900 - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
14. PIGV ENSGALG00000039883 32 0.879 - - - - - - - 0.879 - - phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
15. TRPC3 ENSGALG00000011875 9 0.86 - - - - - 0.860 - - - - transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
16. ENSGALG00000028485 ENSGALG00000028485 1 0.86 - - - - - 0.860 - - - -
17. CD200 ENSGALG00000015396 304 0.859 - - 0.859 - - - - - - - CD200 molecule [Source:NCBI gene;Acc:418425]
18. TITIN TITIN 589 0.856 - - - - - - - - - 0.856
19. SRL ENSGALG00000038884 19 0.85 - - - - - - - - - 0.850 sarcalumenin [Source:NCBI gene;Acc:396269]
20. NCBP2 ENSGALG00000006843 938 0.85 - - - - - - - 0.850 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
21. GEMIN8 ENSGALG00000016574 18 0.845 - - - - - - - 0.845 - - gem nuclear organelle associated protein 8 [Source:HGNC Symbol;Acc:HGNC:26044]
22. OCA2 ENSGALG00000016740 421 0.842 - - - - - - - - - 0.842 OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
23. PCDH17 ENSGALG00000016941 1006 0.842 - - - - - - - - - 0.842 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
24. STXBP5L ENSGALG00000032361 41 0.841 - - - - - - - - - 0.841 syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
25. BMPR-II BMPR-II 33 0.838 - - - - - - - - - 0.838
26. TAC1 ENSGALG00000009737 2211 0.837 - - - - - - - 0.837 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
27. MYOG ENSGALG00000000172 460 0.834 - - - - - - - - - 0.834 myogenin [Source:NCBI gene;Acc:374004]
28. ATP6V0D1 ENSGALG00000002237 13 0.826 - - - - - - - 0.826 - - ATPase H+ transporting V0 subunit d1 [Source:NCBI gene;Acc:415674]
29. FDPS ENSGALG00000028880 429 0.826 - - - - - - - 0.826 - - farnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631]
30. EML4 ENSGALG00000009915 628 0.819 - - - - - - - - - 0.819 echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:HGNC:1316]
31. GP130 GP130 42 0.812 - - - - - - - - - 0.812
32. SERPINB14 SERPINB14 196 0.804 - - - - - - - - - 0.804
33. SPON2 ENSGALG00000038433 1240 0.802 - - - - - - - - - 0.802 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
34. COL9A2 ENSGALG00000027526 4685 0.799 - - - - - - - 0.799 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
35. SCARA3 ENSGALG00000026651 2559 0.797 - - - - - - - 0.797 - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
36. MPEG1 ENSGALG00000028536 99 0.793 - - - - - - - - - 0.793 macrophage expressed 1 [Source:HGNC Symbol;Acc:HGNC:29619]
37. TWIST1 ENSGALG00000041640 1176 0.793 - - - - - - - - - 0.793 twist family bHLH transcription factor 1 [Source:NCBI gene;Acc:395491]
38. PIGM ENSGALG00000010768 41 0.792 - - - - - - - 0.792 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
39. RASGRF2 ENSGALG00000015598 30 0.792 - - - - - - - 0.792 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
40. GALNT14 ENSGALG00000009078 126 0.787 - - 0.787 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
41. RAPSN ENSGALG00000008100 53 0.785 - - - - - - - - - 0.785 receptor associated protein of the synapse [Source:NCBI gene;Acc:395986]
42. COL23A1 ENSGALG00000006708 181 0.784 - - - - - - - - - 0.784 collagen type XXIII alpha 1 chain, transcript variant X1
43. OSF-2 OSF-2 10433 0.78 - - - - - - - 0.780 - -
44. VSTM2L ENSGALG00000006792 11 0.772 - - - - - - - - - 0.772 V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
45. RAB38 ENSGALG00000028018 1046 0.771 - - - - - - - 0.771 - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
46. LECT1 LECT1 12694 0.771 - - - - - - - 0.771 - -
47. EMX1 ENSGALG00000030516 408 0.771 - - - - - - - 0.771 - - empty spiracles homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3340]
48. PARP3 ENSGALG00000004517 331 0.77 - - - - - 0.770 - - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
49. OLFML2B ENSGALG00000002667 8 0.769 - - - - - 0.769 - - - - olfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]
50. POFUT1 ENSGALG00000006594 367 0.768 - - - - - - - - - 0.768 protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
51. VPS37D 3 0.767 - - - - - 0.767 - - - - VPS37D, ESCRT-I subunit
52. DNMBP ENSGALG00000007304 4 0.767 - - - - - 0.767 - - - - dynamin binding protein
53. MINPP1 ENSGALG00000003695 1 0.767 - - - - - 0.767 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
54. CBL ENSGALG00000029077 6 0.767 - - - - - 0.767 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
55. GTF3C3 ENSGALG00000007958 6 0.767 - - - - - 0.767 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
56. RPS6KA2 ENSGALG00000011473 2 0.767 - - - - - 0.767 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
57. MAGI1 ENSGALG00000007431 23 0.767 - - - - - 0.767 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
58. CORO6 ENSGALG00000028949 21 0.767 - - - - - 0.767 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
59. HID1 ENSGALG00000007808 2 0.767 - - - - - 0.767 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
60. BAFF BAFF 40 0.767 - - - - - 0.767 - - - -
61. ENSGALG00000028116 ENSGALG00000028116 0 0.767 - - - - - 0.767 - - - -
62. FARP2 ENSGALG00000005788 6 0.767 - - - - - 0.767 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
63. SNORA24 SNORA24 2 0.767 - - - - - 0.767 - - - -
64. AGRP ENSGALG00000002244 27 0.767 - - - - - 0.767 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
65. gga-mir-301a ENSGALG00000029989 5 0.767 - - - - - 0.767 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
66. OVST_1 ENSGALG00000011930 9 0.767 - - - - - 0.767 - - - - ovostatin [Source:NCBI gene;Acc:396151]
67. LPP ENSGALG00000007337 18 0.767 - - - - - 0.767 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
68. DSCAML1 ENSGALG00000007314 1 0.767 - - - - - 0.767 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
69. ENSGALG00000013409 ENSGALG00000013409 4 0.767 - - - - - 0.767 - - - -
70. ENPP4 ENSGALG00000016708 18 0.767 - - - - - 0.767 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
71. MAVS ENSGALG00000040428 1 0.767 - - - - - 0.767 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
72. SLC26A6 ENSGALG00000026089 3 0.767 - - - - - 0.767 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
73. MFSD11 ENSGALG00000001777 8 0.767 - - - - - 0.767 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
74. TBX15 0 0.767 - - - - - 0.767 - - - - T-box 15
75. TRIM25 ENSGALG00000003144 12 0.767 - - - - - 0.767 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
76. AATK ENSGALG00000006901 1 0.767 - - - - - 0.767 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
77. ERI3 ENSGALG00000010106 995 0.767 - - - - - 0.767 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
78. C17orf105 C17orf105 11 0.767 - - - - - 0.767 - - - -
79. gga-mir-10a ENSGALG00000021952 4 0.767 - - - - - 0.767 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
80. GAMT ENSGALG00000040182 5 0.767 - - - - - 0.767 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
81. FKHR FKHR 1 0.767 - - - - - 0.767 - - - -
82. SOD3 ENSGALG00000018557 16 0.767 - - - - - 0.767 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
83. PABPN1L ENSGALG00000006242 3 0.767 - - - - - 0.767 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
84. WFDC2 ENSGALG00000031164 37 0.767 - - - - - 0.767 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
85. RNF217 ENSGALG00000013651 1 0.767 - - - - - 0.767 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
86. WDR41 ENSGALG00000004350 16 0.767 - - - - - 0.767 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
87. PPM1F ENSGALG00000039121 26 0.767 - - - - - 0.767 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
88. KATNAL2 ENSGALG00000041882 1 0.767 - - - - - 0.767 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
89. LDB1 ENSGALG00000007641 2 0.767 - - - - - 0.767 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
90. NME4 ENSGALG00000002688 1 0.767 - - - - - 0.767 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
91. TMEM189 ENSGALG00000026906 14 0.767 - - - - - 0.767 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
92. AK4 ENSGALG00000011035 9 0.767 - - - - - 0.767 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
93. MNOC MNOC 1 0.767 - - - - - 0.767 - - - -
94. STRA8 ENSGALG00000011722 4 0.767 - - - - - 0.767 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
95. C1H7ORF60 C1H7ORF60 3 0.767 - - - - - 0.767 - - - -
96. FAM160A2 ENSGALG00000003416 23 0.767 - - - - - 0.767 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
97. PITPNC1L ENSGALG00000002610 3 0.767 - - - - - 0.767 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
98. ENSGALG00000013079 ENSGALG00000013079 12 0.767 - - - - - 0.767 - - - -
99. MFSD6 ENSGALG00000041884 1 0.767 - - - - - 0.767 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
100. PRKG2 ENSGALG00000010909 1 0.767 - - - - - 0.767 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]

There are 139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA