Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC3A1

Gene Name Gene ID Reads Annotation
SLC3A1 ENSGALG00000009973 608 solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]











Genes with expression patterns similar to SLC3A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC3A1 ENSGALG00000009973 608 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
2. PRUNE PRUNE 452 1.89 - - 0.990 - - 0.900 - - - -
3. ABCC3 ENSGALG00000007522 340 1.873 - - 0.995 - - 0.878 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
4. SMOC2 ENSGALG00000011205 340 1.863 - - 0.976 - - 0.887 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
5. PTDSS2 ENSGALG00000004300 682 1.832 - - 0.996 - - - - 0.836 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
6. SERPINF2 ENSGALG00000002987 236 1.746 - - - - - 0.876 - 0.870 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
7. NAA30 ENSGALG00000012098 4681 1.72 - - 0.881 - - 0.839 - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
8. WDR92 ENSGALG00000008760 3934 1.717 - - 0.975 - - 0.742 - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
9. LOC415478 ENSGALG00000021171 100 1.692 - - - - - 0.830 - 0.862 - - transmembrane protein 2-like, transcript variant X2
10. TRUB1 ENSGALG00000009091 1005 1.685 - - 0.899 - - - - 0.786 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
11. ZNF335 ENSGALG00000041370 4740 1.661 - - 0.897 - - - - 0.764 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
12. C1H12ORF4 2696 1.656 - - 0.897 - - 0.759 - - - - chromosome 1 open reading frame, human C12orf4
13. RNF214 ENSGALG00000036993 3729 1.645 - - 0.882 - - 0.763 - - - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
14. GLB1L2 ENSGALG00000001604 4057 1.633 - - 0.878 - - - - 0.755 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
15. BAAT ENSGALG00000040619 579 1.632 - - - - - 0.791 - 0.841 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
16. ENSGALG00000016213 ENSGALG00000016213 33 1.597 - - - - - - - 0.819 - 0.778
17. CRCP ENSGALG00000002587 8809 1.591 - - 0.713 - - 0.878 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
18. PRKACB ENSGALG00000028530 12506 1.589 - - 0.846 - - 0.743 - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
19. FAM20A ENSGALG00000040655 934 1.586 - - - - - 0.762 - 0.824 - - FAM20A, golgi associated secretory pathway pseudokinase [Source:HGNC Symbol;Acc:HGNC:23015]
20. SYNE1 ENSGALG00000013505 2324 1.583 - - 0.820 - - - - 0.763 - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
21. YWHAQ ENSGALG00000016433 3450 1.461 - - 0.720 - - 0.741 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
22. UFL1 ENSGALG00000015580 3845 1.46 - - 0.760 - - 0.700 - - - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
23. MRC2 ENSGALG00000000461 48 0.999 - - 0.999 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
24. ITGB4 ENSGALG00000002389 44 0.999 - - 0.999 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
25. TDRD6 48 0.999 - - 0.999 - - - - - - - tudor domain containing 6
26. ENSGALG00000028964 ENSGALG00000028964 46 0.998 - - 0.998 - - - - - - -
27. CDC14B ENSGALG00000012627 110 0.998 - - 0.998 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
28. AKAP10 ENSGALG00000004679 103 0.998 - - 0.998 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
29. UEVLD ENSGALG00000006342 164 0.998 - - 0.998 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
30. SZT2 ENSGALG00000028561 255 0.998 - - 0.998 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
31. RQCD1 RQCD1 110 0.998 - - 0.998 - - - - - - -
32. ENSGALG00000020103 ENSGALG00000020103 64 0.997 - - 0.997 - - - - - - -
33. U4 U4 69 0.997 - - 0.997 - - - - - - -
34. FBXL5 ENSGALG00000014510 245 0.997 - - 0.997 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
35. CLEC16A ENSGALG00000007167 66 0.997 - - 0.997 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
36. MED12 ENSGALG00000036322 814 0.997 - - 0.997 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
37. ENSGALG00000004703 ENSGALG00000004703 112 0.997 - - 0.997 - - - - - - -
38. ENSGALG00000002020 ENSGALG00000002020 183 0.997 - - 0.997 - - - - - - -
39. F2R ENSGALG00000014983 106 0.996 - - 0.996 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
40. L3MBTL3 ENSGALG00000034030 113 0.996 - - 0.996 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
41. OSGIN2 ENSGALG00000042840 83 0.996 - - 0.996 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
42. NXPE3 ENSGALG00000015344 111 0.996 - - 0.996 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
43. DBN1 ENSGALG00000033405 216 0.996 - - 0.996 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
44. TCTN2 ENSGALG00000023683 3596 0.995 - - 0.995 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
45. ITM2B ENSGALG00000016996 1112 0.995 - - 0.995 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
46. GTF2H2 ENSGALG00000002399 2361 0.995 - - 0.995 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
47. TRIM13 ENSGALG00000017011 92 0.995 - - 0.995 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
48. BBS5 ENSGALG00000009846 344 0.994 - - 0.994 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
49. SMARCAD1 ENSGALG00000037339 149 0.994 - - 0.994 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
50. RAD54L2 ENSGALG00000003243 187 0.993 - - 0.993 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
51. GDPD4 ENSGALG00000000690 824 0.992 - - 0.992 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
52. RPS6KB1 ENSGALG00000005198 169 0.992 - - 0.992 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
53. LRRC71 ENSGALG00000027351 695 0.992 - - 0.992 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
54. CHAMP1 ENSGALG00000016813 508 0.992 - - 0.992 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
55. LRRC42 ENSGALG00000010743 384 0.991 - - 0.991 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
56. FAM134C 860 0.991 - - 0.991 - - - - - - - family with sequence similarity 134 member C
57. ATP8B4 ENSGALG00000002326 456 0.989 - - 0.989 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
58. KCTD3 ENSGALG00000009678 335 0.989 - - 0.989 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
59. ABCE1 ENSGALG00000009961 958 0.988 - - 0.988 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
60. IFT81 ENSGALG00000003854 2534 0.988 - - 0.988 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
61. MLLT3 ENSGALG00000015078 502 0.987 - - 0.987 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
62. ADK ENSGALG00000005057 199 0.986 - - 0.986 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
63. RECQL ENSGALG00000013174 1323 0.986 - - 0.986 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
64. TUBGCP3 ENSGALG00000016836 332 0.986 - - 0.986 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
65. BBX ENSGALG00000015353 1281 0.986 - - 0.986 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
66. TTPAL ENSGALG00000004244 2734 0.985 - - 0.985 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
67. PCYT1B 190 0.984 - - 0.984 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
68. TMEM242 ENSGALG00000013689 377 0.984 - - 0.984 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
69. SOBP ENSGALG00000043047 147 0.984 - - 0.984 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
70. GFER ENSGALG00000005579 1367 0.984 - - 0.984 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
71. AASDHPPT ENSGALG00000027981 1017 0.983 - - 0.983 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
72. NACAD 679 0.981 - - 0.981 - - - - - - - NAC alpha domain containing, transcript variant X1
73. WHSC1 1712 0.981 - - 0.981 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
74. NGF ENSGALG00000002556 122 0.98 - - 0.980 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
75. RFK ENSGALG00000033558 1364 0.98 - - 0.980 - - - - - - - riboflavin kinase, transcript variant X3
76. ATF7IP ENSGALG00000011814 1571 0.98 - - 0.980 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
77. WAPAL WAPAL 625 0.979 - - 0.979 - - - - - - -
78. CEP104 ENSGALG00000000978 1130 0.979 - - 0.979 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
79. CHGA ENSGALG00000010820 1028 0.979 - - 0.979 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
80. ENSGALG00000008689 ENSGALG00000008689 232 0.977 - - 0.977 - - - - - - -
81. ATP10D ENSGALG00000014192 94 0.977 - - 0.977 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
82. PCDH17 ENSGALG00000016941 1006 0.976 - - 0.976 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
83. SLC37A3 ENSGALG00000012849 836 0.976 - - 0.976 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
84. SETD1B ENSGALG00000004324 2897 0.975 - - 0.975 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
85. APTX ENSGALG00000001954 692 0.974 - - 0.974 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
86. CENPO ENSGALG00000016609 1699 0.974 - - 0.974 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
87. AKT3 ENSGALG00000034081 866 0.973 - - 0.973 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
88. RRN3 ENSGALG00000041989 3934 0.973 - - 0.973 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
89. RALGDS ENSGALG00000003412 4478 0.972 - - 0.972 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
90. CA9 ENSGALG00000021340 1431 0.971 - - 0.971 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
91. C18orf8 C18orf8 1512 0.971 - - 0.971 - - - - - - -
92. MED15 ENSGALG00000006430 814 0.97 - - 0.970 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
93. GGT7 ENSGALG00000001062 476 0.969 - - 0.969 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
94. SGCE ENSGALG00000009670 3070 0.968 - - 0.968 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
95. RALGAPA2 240 0.968 - - 0.968 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
96. MIB1 ENSGALG00000014974 3583 0.965 - - 0.965 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
97. IFT57 ENSGALG00000015356 5540 0.965 - - 0.965 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
98. TUBA4A ENSGALG00000000433 1367 0.965 - - 0.965 - - - - - - - tubulin alpha 4a
99. DDX6 ENSGALG00000033064 2193 0.964 - - 0.964 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
100. CAMSAP1 ENSGALG00000001692 2617 0.963 - - 0.963 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]

There are 823 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA