Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC1A1

Gene Name Gene ID Reads Annotation
SLC1A1 ENSGALG00000010187 637 solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]











Genes with expression patterns similar to SLC1A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC1A1 ENSGALG00000010187 637 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
2. ENSGALG00000026155 ENSGALG00000026155 49 1.479 - - - - - 0.759 - 0.720 - -
3. BCAS1 ENSGALG00000007796 379 0.998 - - - - - - 0.998 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
4. SDCCAG8 ENSGALG00000010713 311 0.998 - - - - - - 0.998 - - - serologically defined colon cancer antigen 8, transcript variant X5
5. MTFMT ENSGALG00000007353 805 0.998 - - - - - - 0.998 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
6. GCC2 ENSGALG00000016806 1085 0.997 - - - - - - 0.997 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
7. UBAC1 ENSGALG00000042564 598 0.997 - - - - - - 0.997 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
8. CAMKK2 ENSGALG00000040131 2795 0.997 - - - - - - 0.997 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
9. CETN2 ENSGALG00000007510 1688 0.997 - - - - - - 0.997 - - - centrin 2 [Source:NCBI gene;Acc:422303]
10. KLHL29 ENSGALG00000016495 582 0.997 - - - - - - 0.997 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
11. POPDC3 ENSGALG00000027420 700 0.996 - - - - - - 0.996 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
12. ENSGALG00000002923 ENSGALG00000002923 2233 0.995 - - - - - - 0.995 - - -
13. HACE1 ENSGALG00000015415 1194 0.995 - - - - - - 0.995 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
14. SREBF2 ENSGALG00000041687 4519 0.994 - - - - - - 0.994 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
15. NPHP3 ENSGALG00000034586 1465 0.993 - - - - - - 0.993 - - - nephrocystin 3, transcript variant X1
16. LMNB2 ENSGALG00000000470 4364 0.993 - - - - - - 0.993 - - - lamin B2 [Source:NCBI gene;Acc:396222]
17. BFAR ENSGALG00000003111 1778 0.989 - - - - - - 0.989 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
18. NDUFB8 ENSGALG00000005704 5781 0.988 - - - - - - 0.988 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
19. IRAK2 ENSGALG00000008407 5934 0.988 - - - - - - 0.988 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
20. MOB2 ENSGALG00000030499 3658 0.987 - - - - - - 0.987 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
21. DNAJA3 ENSGALG00000007821 3963 0.987 - - - - - - 0.987 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
22. AKAP7 ENSGALG00000029794 3287 0.986 - - - - - - 0.986 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
23. SHQ1 ENSGALG00000007798 1982 0.986 - - - - - - 0.986 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
24. MOB1B ENSGALG00000011573 567 0.986 - - - - - - 0.986 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
25. PNO1 ENSGALG00000009093 11153 0.985 - - - - - - 0.985 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
26. MAP1LC3A ENSGALG00000038721 2230 0.984 - - - - - - 0.984 - - - microtubule associated protein 1 light chain 3 alpha
27. AK6 ENSGALG00000020534 4791 0.983 - - - - - - 0.983 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
28. ATN1 ENSGALG00000014554 3270 0.983 - - - - - - 0.983 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
29. ABCD3 ENSGALG00000005647 4844 0.983 - - - - - - 0.983 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
30. ARHGAP29 ENSGALG00000005683 3622 0.982 - - - - - - 0.982 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
31. gga-mir-6643 ENSGALG00000027935 4442 0.981 - - - - - - 0.981 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
32. LEPROTL1 ENSGALG00000024482 4251 0.981 - - - - - - 0.981 - - - leptin receptor overlapping transcript-like 1
33. CLCN3 ENSGALG00000009674 3704 0.98 - - - - - - 0.980 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
34. EIF4G3 ENSGALG00000010084 5881 0.98 - - - - - - 0.980 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
35. MSRA ENSGALG00000028032 2607 0.98 - - - - - - 0.980 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
36. INTS10 ENSGALG00000010130 6320 0.979 - - - - - - 0.979 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
37. DISP1 3281 0.979 - - - - - - 0.979 - - - dispatched RND transporter family member 1, transcript variant X3
38. RRN3 ENSGALG00000041989 3934 0.979 - - - - - - 0.979 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
39. METTL11A METTL11A 11876 0.977 - - - - - - 0.977 - - -
40. TBCCD1 ENSGALG00000006566 2696 0.976 - - - - - - 0.976 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
41. POLR3E ENSGALG00000007008 4010 0.976 - - - - - - 0.976 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
42. MYST2 MYST2 8078 0.975 - - - - - - 0.975 - - -
43. IMPACT ENSGALG00000015093 1334 0.975 - - - - - - 0.975 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
44. MED6 ENSGALG00000029743 9414 0.974 - - - - - - 0.974 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
45. RBBP6 ENSGALG00000006043 9708 0.973 - - - - - - 0.973 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
46. RILPL2 ENSGALG00000003321 5632 0.973 - - - - - - 0.973 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
47. YBX1 ENSGALG00000004848 20992 0.972 - - - - - - 0.972 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
48. TMEM108 ENSGALG00000036412 2903 0.971 - - - - - - 0.971 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
49. AP2B1 ENSGALG00000042125 13229 0.971 - - - - - - 0.971 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
50. PPP3R1 ENSGALG00000023648 3417 0.97 - - - - - - 0.970 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
51. KCTD9 ENSGALG00000000275 3455 0.97 - - - - - - 0.970 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
52. EI24 ENSGALG00000038097 24081 0.968 - - - - - - 0.968 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
53. LATS2 4776 0.964 - - - - - - 0.964 - - - large tumor suppressor kinase 2
54. THOC2 ENSGALG00000008507 9501 0.964 - - - - - - 0.964 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
55. SCRN1 ENSGALG00000011176 3783 0.964 - - - - - - 0.964 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
56. ARID4A ENSGALG00000012037 8554 0.963 - - - - - - 0.963 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
57. ATE1 ENSGALG00000009502 3751 0.963 - - - - - - 0.963 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
58. ENSGALG00000027854 ENSGALG00000027854 5007 0.96 - - - - - - 0.960 - - -
59. DNA2 ENSGALG00000004037 5426 0.959 - - - - - - 0.959 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
60. PRCP ENSGALG00000037521 4012 0.959 - - - - - - 0.959 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
61. NCOA4 ENSGALG00000002066 10544 0.958 - - - - - - 0.958 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
62. CHMP7 ENSGALG00000000409 8967 0.958 - - - - - - 0.958 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
63. POLA1 ENSGALG00000016312 9440 0.956 - - - - - - 0.956 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
64. SLC25A14 ENSGALG00000004063 5574 0.955 - - - - - - 0.955 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
65. E2F6 ENSGALG00000016454 4747 0.954 - - - - - - 0.954 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
66. RBM12B ENSGALG00000035129 4314 0.953 - - - - - - 0.953 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
67. LACTB2 ENSGALG00000038745 3460 0.953 - - - - - - 0.953 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
68. H2AFY_1 ENSGALG00000040141 4895 0.953 - - - - - - 0.953 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
69. OGFOD1 6926 0.95 - - - - - - 0.950 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
70. MED7 ENSGALG00000003870 4244 0.947 - - - - - - 0.947 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
71. TM9SF3 ENSGALG00000005534 15290 0.946 - - - - - - 0.946 - - - transmembrane 9 superfamily member 3
72. RGCC ENSGALG00000016954 1282 0.944 - - - - - - 0.944 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
73. NDUFA9 ENSGALG00000017282 14358 0.943 - - - - - - 0.943 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
74. PPIF ENSGALG00000004809 5586 0.943 - - - - - - 0.943 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
75. SEMA4B ENSGALG00000008297 11202 0.942 - - - - - - 0.942 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
76. MFGE8 ENSGALG00000006702 6976 0.937 - - - - - - 0.937 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
77. RPA1 ENSGALG00000003072 8023 0.937 - - - - - - 0.937 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
78. XRN1 ENSGALG00000002706 4014 0.936 - - - - - - 0.936 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
79. CCND1 ENSGALG00000007555 6715 0.936 - - - - - - 0.936 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
80. UBA3 ENSGALG00000013410 6923 0.935 - - - - - - 0.935 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
81. MRE11A MRE11A 5754 0.933 - - - - - - 0.933 - - -
82. SDF4 ENSGALG00000001872 6382 0.93 - - - - - - 0.930 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
83. BTAF1 ENSGALG00000030598 3556 0.93 - - - - - - 0.930 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
84. BPTF ENSGALG00000038222 7521 0.93 - - - - - - 0.930 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
85. FGD3 ENSGALG00000005237 4410 0.927 - - - - - - 0.927 - - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
86. GFM1 ENSGALG00000009634 7213 0.925 - - - - - - 0.925 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
87. ARNT2 ENSGALG00000006445 7050 0.925 - - - - - - 0.925 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
88. ALDH4A1 ENSGALG00000042184 9432 0.923 - - - - - - 0.923 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
89. RTN4IP1 ENSGALG00000015343 4366 0.923 - - - - - - 0.923 - - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
90. CCDC58 ENSGALG00000014413 9022 0.92 - - - - - - 0.920 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
91. DUSP19 ENSGALG00000043268 5543 0.919 - - - - - - 0.919 - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
92. ZMYND11 ENSGALG00000006599 5740 0.918 - - - - - - 0.918 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
93. PSMG3 ENSGALG00000004203 11240 0.916 - - - - - - 0.916 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
94. GCLM ENSGALG00000005782 15789 0.913 - - - - - - 0.913 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
95. RAB20 ENSGALG00000016844 3250 0.912 - - - - - - 0.912 - - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
96. SIRT1 ENSGALG00000002761 9028 0.91 - - - - - - 0.910 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
97. LRRC43 LRRC43 16 0.905 - - - - - 0.905 - - - -
98. XPA ENSGALG00000028998 8621 0.905 - - - - - - 0.905 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
99. SOD2 ENSGALG00000011661 13178 0.904 - - - - - - 0.904 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
100. KIAA1045 KIAA1045 23 0.903 - - - - - 0.903 - - - -

There are 222 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA