Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SLC16A1

Gene Name Gene ID Reads Annotation
SLC16A1 ENSGALG00000001717 18566 solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]











Genes with expression patterns similar to SLC16A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC16A1 ENSGALG00000001717 18566 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
2. SUMO2 ENSGALG00000007971 46283 1.706 - - - - 0.719 - 0.987 - - - small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
3. DDOST ENSGALG00000010073 18707 1.668 - - - - 0.898 - 0.770 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
4. FAM120A ENSGALG00000039316 28650 0.948 - - - - - - - 0.948 - - family with sequence similarity 120A, transcript variant X1
5. SRGAP1 ENSGALG00000009825 6753 0.918 - - - - 0.918 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
6. UPF3B ENSGALG00000008618 12350 0.916 - - - - 0.916 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
7. KPNA2 ENSGALG00000003584 76058 0.913 - - - - 0.913 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
8. CHMP5 ENSGALG00000013160 13347 0.912 - - - - 0.912 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
9. CCDC132 CCDC132 2632 0.911 - - - - 0.911 - - - - -
10. PSMG3 ENSGALG00000004203 11240 0.911 - - - - 0.911 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
11. ACAT2 ENSGALG00000011659 12825 0.91 - - - - 0.910 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
12. SELT SELT 25524 0.909 - - - - 0.909 - - - - -
13. WNK2 ENSGALG00000038850 4712 0.905 - - - - 0.905 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
14. DENR ENSGALG00000003795 30805 0.905 - - - - 0.905 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
15. NUP88 ENSGALG00000032280 9847 0.904 - - - - 0.904 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
16. SRP19 ENSGALG00000000218 14207 0.902 - - - - 0.902 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
17. DLD ENSGALG00000007931 11011 0.902 - - - - 0.902 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
18. TAF3 ENSGALG00000006731 15569 0.901 - - - - 0.901 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
19. RALGDS ENSGALG00000003412 4478 0.901 - - - - 0.901 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
20. LGMN ENSGALG00000010811 7401 0.9 - - - - 0.900 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
21. CENPP ENSGALG00000004687 6707 0.899 - - - - 0.899 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
22. SPRED1 ENSGALG00000028203 6520 0.899 - - - - 0.899 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
23. PBRM1 ENSGALG00000037455 6450 0.898 - - - - 0.898 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
24. TSPO2 ENSGALG00000003212 5141 0.898 - - - - 0.898 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
25. TIMMDC1 ENSGALG00000024480 9337 0.898 - - - - 0.898 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
26. ZDHHC6 ENSGALG00000008870 16575 0.896 - - - - 0.896 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
27. LOC426385 ENSGALG00000026301 2703 0.896 - - - - 0.896 - - - - - serine/threonine kinase 35-like, transcript variant X2
28. VMA21 ENSGALG00000009065 6432 0.896 - - - - 0.896 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
29. KIF11 ENSGALG00000030597 5528 0.894 - - - - 0.894 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
30. G3BP1 ENSGALG00000004160 36795 0.894 - - - - 0.894 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
31. DDX27 ENSGALG00000006974 18388 0.892 - - - - 0.892 - - - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
32. PHTF1 ENSGALG00000001845 3276 0.892 - - - - 0.892 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
33. COMMD2 ENSGALG00000028001 18981 0.892 - - - - 0.892 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
34. IARS2 ENSGALG00000009566 4599 0.891 - - - - 0.891 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
35. MYBL2 ENSGALG00000003503 15875 0.891 - - - - 0.891 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
36. PRCC ENSGALG00000040696 9346 0.891 - - - - 0.891 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
37. RPL22 ENSGALG00000000719 74238 0.89 - - - - 0.890 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
38. SLMO2 SLMO2 9207 0.89 - - - - 0.890 - - - - -
39. ZYX ENSGALG00000014688 8686 0.889 - - - - 0.889 - - - - - zyxin [Source:NCBI gene;Acc:418300]
40. MRPL16 ENSGALG00000029419 8033 0.889 - - - - 0.889 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
41. FUNDC2 ENSGALG00000029585 9334 0.888 - - - - 0.888 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
42. GATC ENSGALG00000007195 8610 0.888 - - - - 0.888 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
43. PSMD3 ENSGALG00000033162 25615 0.886 - - - - 0.886 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
44. LGALS1 ENSGALG00000012420 13993 0.886 - - - - 0.886 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
45. WDR92 ENSGALG00000008760 3934 0.886 - - - - 0.886 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
46. UBE2D3 ENSGALG00000012311 39831 0.886 - - - - 0.886 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
47. MINOS1 ENSGALG00000004039 37740 0.886 - - - - 0.886 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
48. CDCA7 ENSGALG00000040833 7484 0.885 - - - - 0.885 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
49. C9orf85 ENSGALG00000026001 4110 0.885 - - - - 0.885 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
50. CDH3 5050 0.885 - - - - 0.885 - - - - - cadherin 3
51. SREK1 ENSGALG00000014775 13961 0.885 - - - - 0.885 - - - - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
52. MED21 ENSGALG00000027435 5766 0.885 - - - - 0.885 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
53. ZC3H6 ENSGALG00000008269 10353 0.884 - - - - 0.884 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
54. ENSGALG00000027854 ENSGALG00000027854 5007 0.884 - - - - 0.884 - - - - -
55. HSF2 ENSGALG00000038420 5259 0.883 - - - - 0.883 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
56. LZIC ENSGALG00000002616 9052 0.883 - - - - 0.883 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
57. COQ5 ENSGALG00000007185 5614 0.883 - - - - 0.883 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
58. BRF1 ENSGALG00000011705 3406 0.883 - - - - 0.883 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
59. RAD54B ENSGALG00000043597 1699 0.883 - - - - 0.883 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
60. HARS ENSGALG00000035080 11602 0.883 - - - - 0.883 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
61. RAD23B ENSGALG00000015540 10828 0.883 - - - - 0.883 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
62. ETS1 ENSGALG00000001143 7284 0.882 - - - - 0.882 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
63. BAHD1 ENSGALG00000033675 1779 0.882 - - - - 0.882 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
64. UTP6 ENSGALG00000003260 4909 0.882 - - - - 0.882 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
65. STARD3NL ENSGALG00000033038 4851 0.881 - - - - 0.881 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
66. MED8 ENSGALG00000009993 3095 0.88 - - - - 0.880 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
67. NARS ENSGALG00000040506 9506 0.878 - - - - 0.878 - - - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
68. RBM34 ENSGALG00000029915 5618 0.878 - - - - 0.878 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
69. SNX14 ENSGALG00000015831 2554 0.878 - - - - 0.878 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
70. PTK2B ENSGALG00000016564 406 0.878 - - - - 0.878 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
71. YARS ENSGALG00000003563 11093 0.877 - - - - 0.877 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
72. KIF2A ENSGALG00000014737 16391 0.877 - - - - 0.877 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
73. ANKRD9 ENSGALG00000011376 525 0.877 - - - - 0.877 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
74. FNDC5 ENSGALG00000003567 3328 0.877 - - - - 0.877 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
75. MARC1 ENSGALG00000009453 5675 0.877 - - - - 0.877 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
76. SDCBP ENSGALG00000015436 1228 0.876 - - - - 0.876 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
77. LMAN2 ENSGALG00000033232 11740 0.876 - - - - 0.876 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
78. RBM6 ENSGALG00000035578 1690 0.876 - - - - 0.876 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
79. YBX1 ENSGALG00000004848 20992 0.876 - - - - 0.876 - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
80. ASAP2 ENSGALG00000016419 1393 0.876 - - - - 0.876 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
81. RAMP3 ENSGALG00000037246 1187 0.875 - - - - 0.875 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
82. SMG7 ENSGALG00000004667 707 0.875 - - - - 0.875 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
83. NEK6 ENSGALG00000001118 20333 0.875 - - - - 0.875 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
84. DKK3 ENSGALG00000005551 7807 0.875 - - - - 0.875 - - - - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
85. PREP2 PREP2 238 0.875 - - - - 0.875 - - - - -
86. CDKN1B ENSGALG00000022980 4606 0.875 - - - - 0.875 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
87. PITHD1 ENSGALG00000003986 11470 0.874 - - - - 0.874 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
88. ENSGALG00000006569 ENSGALG00000006569 2169 0.874 - - - - 0.874 - - - - -
89. GTF2H1 ENSGALG00000042340 1553 0.874 - - - - 0.874 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
90. NDUFV1 ENSGALG00000042809 6222 0.874 - - - - 0.874 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
91. SAP30 ENSGALG00000036252 2032 0.873 - - - - 0.873 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
92. BIRC5 ENSGALG00000008713 46856 0.873 - - - - 0.873 - - - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
93. PRDM4 ENSGALG00000012619 876 0.871 - - - - 0.871 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
94. Mar-05 Mar-05 6330 0.871 - - - - 0.871 - - - - -
95. SPEN ENSGALG00000036932 9688 0.87 - - - - 0.870 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
96. SLC30A4 ENSGALG00000005703 5696 0.87 - - - - 0.870 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
97. TMF1 ENSGALG00000013408 3344 0.87 - - - - 0.870 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
98. TM9SF3 ENSGALG00000005534 15290 0.869 - - - - 0.869 - - - - - transmembrane 9 superfamily member 3
99. PRKCI ENSGALG00000009364 11574 0.869 - - - - 0.869 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
100. SYNE1 ENSGALG00000013505 2324 0.866 - - - - 0.866 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3

There are 131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA