Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SKP2

Gene Name Gene ID Reads Annotation
SKP2 ENSGALG00000003547 14637 S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]











Genes with expression patterns similar to SKP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SKP2 ENSGALG00000003547 14637 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
2. DDX55 ENSGALG00000003298 2315 1.89 - - - - 0.952 - - 0.938 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
3. RANGAP1 ENSGALG00000011966 20170 1.76 - - - - 0.946 - 0.814 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
4. TTC4 10377 1.753 - - - - - - 0.760 0.993 - - tetratricopeptide repeat domain 4
5. METTL23 ENSGALG00000001790 7906 1.728 - - - - 0.924 - 0.804 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
6. EXO1 ENSGALG00000010748 7572 1.728 - - - - 0.943 - 0.785 - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
7. ESF1 ENSGALG00000034768 8610 1.722 - - - - - - 0.779 0.943 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
8. TNRC18 ENSGALG00000040770 4061 1.714 - - - - - - 0.776 0.938 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
9. ATG5 ENSGALG00000015387 7752 1.713 - - - - 0.957 - 0.756 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
10. FBXO5 ENSGALG00000013607 6156 1.711 - - - - - - 0.769 0.942 - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
11. PSPC1 ENSGALG00000017142 13036 1.711 - - - - 0.946 - 0.765 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
12. POLR2B ENSGALG00000011387 4864 1.71 - - - - 0.946 - 0.764 - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
13. PNRC2 ENSGALG00000004122 19228 1.707 - - - - 0.936 - 0.771 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
14. BAG2 ENSGALG00000026605 3898 1.705 - - - - - - 0.768 0.937 - - BCL2 associated athanogene 2
15. PTTG1 17936 1.703 - - - - 0.944 - 0.759 - - - pituitary tumor-transforming 1, transcript variant X1
16. PLAA ENSGALG00000001782 5459 1.7 - - - - 0.952 - 0.748 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
17. NUDC ENSGALG00000000895 17844 1.7 - - - - 0.756 - - 0.944 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
18. TAF3 ENSGALG00000006731 15569 1.687 - - - - - - 0.824 0.863 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
19. IGBP1 ENSGALG00000044628 9200 1.684 - - - - 0.950 - 0.734 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
20. HIGD2A ENSGALG00000003348 34109 1.68 - - - - - - 0.738 0.942 - - HIG1 hypoxia inducible domain family member 2A
21. TK2 ENSGALG00000034216 5394 1.679 - - - - 0.946 - 0.733 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
22. PSMG1 ENSGALG00000016062 7511 1.668 - - - - - - 0.726 0.942 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
23. SPARC ENSGALG00000004184 36410 1.666 - - - - - - 0.715 0.951 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
24. SAR1B ENSGALG00000038753 6493 1.662 - - - - 0.945 - 0.717 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
25. PUM1 ENSGALG00000042598 9392 1.66 - - - - 0.944 - 0.716 - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
26. OLA1 ENSGALG00000009325 26414 1.659 - - - - 0.952 - 0.707 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
27. TLK2 ENSGALG00000000410 4690 1.657 - - - - 0.951 - 0.706 - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
28. SRSF6 ENSGALG00000000990 12424 1.654 - - - - - - 0.756 0.898 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
29. EIF2B1 ENSGALG00000003259 9491 1.649 - - - - - - 0.772 0.877 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
30. GMPPA ENSGALG00000002417 10383 1.636 - - - - - - 0.840 0.796 - - GDP-mannose pyrophosphorylase A, transcript variant X2
31. TMEM115 ENSGALG00000026965 13050 1.627 - - - - - - 0.852 0.775 - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
32. SH3BGRL3 ENSGALG00000038536 18187 1.623 - - - - - - 0.749 0.874 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
33. COPS4 ENSGALG00000011130 21515 1.592 - - - - 0.867 - - 0.725 - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
34. C4H4ORF52 C4H4ORF52 8116 1.564 - - - - - - 0.795 0.769 - -
35. GOLGA7 ENSGALG00000003483 26525 1.562 - - - - - - 0.799 0.763 - - golgin A7 [Source:NCBI gene;Acc:426787]
36. CTSO ENSGALG00000009373 4186 1.523 - - - - - - 0.749 0.774 - - cathepsin O [Source:NCBI gene;Acc:422410]
37. ASUN ASUN 17129 1.505 - - - - - - 0.774 0.731 - -
38. C1orf174 ENSGALG00000000975 4947 1.504 - - - - - - 0.729 0.775 - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
39. FAM98A ENSGALG00000010428 9585 1.477 - - - - - 0.712 0.765 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
40. CLINT1 ENSGALG00000003702 11269 1.473 - - 0.746 - - - 0.727 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
41. USP10 ENSGALG00000005674 7768 1.453 - - - - 0.750 - 0.703 - - - ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
42. TRAPPC2 ENSGALG00000016578 8749 1.446 - - - - - - 0.740 0.706 - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
43. FH ENSGALG00000013165 13669 0.965 - - - - 0.965 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
44. ATP1A1 ENSGALG00000032247 15898 0.965 - - - - - - - 0.965 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
45. FBXO9 ENSGALG00000016320 9600 0.963 - - - - 0.963 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
46. MKI67 ENSGALG00000025996 28136 0.96 - - - - 0.960 - - - - - marker of proliferation Ki-67, transcript variant X3
47. RABEP1 ENSGALG00000001737 2650 0.96 - - - - 0.960 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
48. MRPS27 ENSGALG00000015002 6541 0.959 - - - - 0.959 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
49. TMEM165 ENSGALG00000027886 5468 0.958 - - - - 0.958 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
50. KPNA3 ENSGALG00000017009 17330 0.957 - - - - 0.957 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
51. COIL ENSGALG00000003158 7806 0.957 - - - - 0.957 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
52. NAP1L1 ENSGALG00000010238 14506 0.955 - - - - 0.955 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
53. SIRT1 ENSGALG00000002761 9028 0.955 - - - - 0.955 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
54. CZH9ORF41 CZH9ORF41 3492 0.955 - - - - 0.955 - - - - -
55. AATF ENSGALG00000005420 6501 0.955 - - - - 0.955 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
56. MRPL23 ENSGALG00000006561 13737 0.955 - - - - 0.955 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
57. CCT4 ENSGALG00000008812 78267 0.955 - - - - 0.955 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
58. KNOP1 ENSGALG00000002042 6251 0.955 - - - - 0.955 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
59. SSR2 ENSGALG00000000764 32190 0.954 - - - - 0.954 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
60. EAPP ENSGALG00000010007 5080 0.954 - - - - 0.954 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
61. TRAPPC12 ENSGALG00000016387 2593 0.954 - - - - 0.954 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
62. STK3 ENSGALG00000032850 6339 0.954 - - - - 0.954 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
63. BAG4 ENSGALG00000003254 5751 0.954 - - - - 0.954 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
64. POLR3F ENSGALG00000008749 5645 0.953 - - - - 0.953 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
65. TCP11L1 ENSGALG00000011688 2427 0.952 - - - - 0.952 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
66. LATS2 4776 0.952 - - - - 0.952 - - - - - large tumor suppressor kinase 2
67. RPL24 ENSGALG00000015339 227460 0.952 - - - - 0.952 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
68. DNAJC12 ENSGALG00000002769 1418 0.952 - - - - 0.952 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
69. CDC42SE2 ENSGALG00000027258 4725 0.952 - - - - 0.952 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
70. IGF1R ENSGALG00000040651 772 0.951 - - - - 0.951 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
71. XPO7 ENSGALG00000001838 1875 0.951 - - - - 0.951 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
72. COMMD8 ENSGALG00000026279 13509 0.951 - - - - 0.951 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
73. FERMT2 ENSGALG00000012425 5480 0.951 - - - - 0.951 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
74. ENSGALG00000011687 ENSGALG00000011687 4553 0.951 - - - - 0.951 - - - - -
75. SSPN ENSGALG00000014042 638 0.95 - - - - 0.950 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
76. CSNK1G1 ENSGALG00000030812 31618 0.95 - - - - 0.950 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
77. SHROOM2 ENSGALG00000030802 4517 0.95 - - - - 0.950 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
78. REST 2394 0.95 - - - - 0.950 - - - - - RE1 silencing transcription factor
79. WDR82 ENSGALG00000025904 4783 0.95 - - - - 0.950 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
80. ELL2 ENSGALG00000014678 1111 0.95 - - - - 0.950 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
81. CTSZ ENSGALG00000007462 630 0.95 - - - - 0.950 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
82. ADD3 ENSGALG00000008542 13814 0.95 - - - - 0.950 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
83. YY1 ENSGALG00000017388 1933 0.95 - - - - 0.950 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
84. MRPS25 ENSGALG00000008506 12131 0.95 - - - - 0.950 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
85. ENSGALG00000014852 ENSGALG00000014852 15288 0.949 - - - - 0.949 - - - - -
86. TLCD1 ENSGALG00000003973 17569 0.949 - - - - 0.949 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
87. CBWD1 ENSGALG00000010147 2765 0.949 - - - - 0.949 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
88. DHFR ENSGALG00000026757 18478 0.948 - - - - 0.948 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
89. LARP1 ENSGALG00000040109 14808 0.947 - - - - 0.947 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
90. STRAP ENSGALG00000013092 13100 0.947 - - - - 0.947 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
91. PTPN12 9302 0.947 - - - - 0.947 - - - - - protein tyrosine phosphatase, non-receptor type 12
92. ZBTB10 ENSGALG00000034376 3271 0.947 - - - - 0.947 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
93. RCAN3 ENSGALG00000004282 7778 0.946 - - - - 0.946 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
94. SH2D3C ENSGALG00000005036 5101 0.945 - - - - 0.945 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
95. PCBP4 ENSGALG00000027695 7937 0.944 - - - - 0.944 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
96. OGT ENSGALG00000005425 31074 0.941 - - - - 0.941 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
97. SFSWAP ENSGALG00000002487 9977 0.941 - - - - 0.941 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
98. RAB12 ENSGALG00000033608 14160 0.941 - - - - 0.941 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
99. CTPS1 ENSGALG00000042967 9532 0.941 - - - - - - - 0.941 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
100. PRMT7 ENSGALG00000038865 2666 0.94 - - - - - - - 0.940 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]

There are 872 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA