Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SKP1

Gene Name Gene ID Reads Annotation
SKP1 ENSGALG00000006474 37807 S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]











Genes with expression patterns similar to SKP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SKP1 ENSGALG00000006474 37807 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]
2. DDX5 ENSGALG00000003532 75471 1.663 - - - - 0.721 - 0.942 - - - DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
3. TAF2 ENSGALG00000043193 6311 1.467 - - - - 0.722 - - 0.745 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
4. MRPL3 ENSGALG00000040873 21053 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
5. NDUFA2 ENSGALG00000040626 27899 0.999 - - - - - - 0.999 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
6. IMMT ENSGALG00000015783 25009 0.999 - - - - - - 0.999 - - - inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
7. SNTB1 ENSGALG00000034528 3907 0.998 - - - - - - 0.998 - - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
8. ITGB5 ENSGALG00000029766 5978 0.998 - - - - - - 0.998 - - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
9. HUNK ENSGALG00000015879 7227 0.998 - - - - - - 0.998 - - - hormonally up-regulated Neu-associated kinase [Source:HGNC Symbol;Acc:HGNC:13326]
10. HES6 ENSGALG00000028415 4830 0.998 - - - - - - 0.998 - - - hes family bHLH transcription factor 6
11. LOC107057078 ENSGALG00000004725 28489 0.998 - - - - - - 0.998 - - - acyl-CoA dehydrogenase family member 10-like, transcript variant X7
12. PPP6R3 ENSGALG00000007037 10919 0.998 - - - - - - 0.998 - - - protein phosphatase 6 regulatory subunit 3 [Source:NCBI gene;Acc:423116]
13. DOCK1 ENSGALG00000042259 5438 0.998 - - - - - - 0.998 - - - dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
14. NAT10 ENSGALG00000014573 12754 0.998 - - - - - - 0.998 - - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
15. ENSGALG00000012451 ENSGALG00000012451 7912 0.997 - - - - - - 0.997 - - -
16. NUP43 ENSGALG00000012387 11779 0.984 - - - - - - 0.984 - - - nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]
17. EIF4A3 ENSGALG00000008530 53964 0.982 - - - - - - 0.982 - - - eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
18. ATP6V1E1 ENSGALG00000013036 13497 0.946 - - - - - - 0.946 - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
19. SLC25A6 ENSGALG00000016691 76738 0.943 - - - - - - 0.943 - - - solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
20. KPNA2 ENSGALG00000003584 76058 0.914 - - - - - - 0.914 - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
21. RPL6 ENSGALG00000004818 253572 0.895 - - - - - - 0.895 - - - ribosomal protein L6 [Source:NCBI gene;Acc:373957]
22. RPS6 ENSGALG00000015082 307412 0.888 - - - - - - 0.888 - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
23. NDUFA12 ENSGALG00000011325 19807 0.876 - - - - - - - 0.876 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
24. BZW2 ENSGALG00000010809 29213 0.867 - - - - - - - 0.867 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
25. QTRTD1 QTRTD1 10765 0.856 - - - - - - - 0.856 - -
26. GNG5 ENSGALG00000027561 44211 0.852 - - - - - - 0.852 - - - G protein subunit gamma 5 [Source:NCBI gene;Acc:424538]
27. GCSH ENSGALG00000032679 29231 0.842 - - - - - - - 0.842 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
28. DBI ENSGALG00000012112 6910 0.832 - - - - - - - 0.832 - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
29. ENSGALG00000028938 ENSGALG00000028938 18616 0.828 - - - - - - - 0.828 - -
30. MAEA ENSGALG00000013310 13230 0.819 - - - - - - - 0.819 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
31. SPCS1 ENSGALG00000001655 7718 0.818 - - - - - - - 0.818 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
32. NUP37 ENSGALG00000012759 9985 0.817 - - - - - - - 0.817 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
33. KDM1A ENSGALG00000033469 20632 0.814 - - - - - - - - 0.814 - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
34. TMSB4X ENSGALG00000026383 293046 0.813 - - - - - - 0.813 - - - Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
35. SNX4 ENSGALG00000012052 11634 0.811 - - - - - - - 0.811 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
36. PUS1 ENSGALG00000002354 10153 0.809 - - - - - - - 0.809 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
37. CHRAC1 ENSGALG00000040823 5695 0.809 - - - - - - - 0.809 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
38. DAD1 ENSGALG00000035626 32604 0.807 - - - - - - - 0.807 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
39. GAS41 GAS41 9941 0.805 - - - - - - - 0.805 - -
40. PPP1R8 ENSGALG00000000729 11797 0.804 - - - - - - - 0.804 - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
41. SNRPC ENSGALG00000002773 21965 0.803 - - - - - - - 0.803 - - small nuclear ribonucleoprotein polypeptide C [Source:NCBI gene;Acc:419901]
42. NARS ENSGALG00000040506 9506 0.803 - - - - - - - 0.803 - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
43. MAD2L1 ENSGALG00000011967 16125 0.802 - - - - - - - 0.802 - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
44. SCAMP5 ENSGALG00000014116 8877 0.801 - - - - - - - 0.801 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
45. C4orf27 C4orf27 16724 0.797 - - - - - - - 0.797 - -
46. PSMB3 ENSGALG00000001597 22588 0.795 - - - - - - - 0.795 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
47. SRP14 ENSGALG00000009592 17828 0.795 - - - - - - - 0.795 - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
48. KDELR2 ENSGALG00000040793 29669 0.792 - - - - - - - 0.792 - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
49. EIF5B ENSGALG00000016764 30681 0.791 - - - - - - - 0.791 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
50. DCTD ENSGALG00000010674 8396 0.79 - - - - - - - 0.790 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
51. GABPB1 ENSGALG00000023440 5676 0.79 - - - - - - - 0.790 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
52. BLMH ENSGALG00000004259 36907 0.79 - - - - - - - 0.790 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
53. CASP6 ENSGALG00000012186 6639 0.789 - - - - - - - 0.789 - - caspase 6 [Source:NCBI gene;Acc:395477]
54. TMEM14A ENSGALG00000019894 5279 0.787 - - - - - - - 0.787 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
55. EBAG9 ENSGALG00000036293 10058 0.787 - - - - - - - 0.787 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
56. EMC3 ENSGALG00000003738 10363 0.786 - - - - - - - 0.786 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
57. TXNL1 ENSGALG00000033862 13899 0.786 - - - - - - - 0.786 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
58. C19orf70 ENSGALG00000026847 19315 0.786 - - - - - - - 0.786 - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
59. RPP40 ENSGALG00000036074 2068 0.785 - - - - - - - 0.785 - - ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992]
60. C1H21ORF91 ENSGALG00000028290 5550 0.784 - - - - - - - 0.784 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
61. POMP ENSGALG00000017090 5504 0.782 - - - - - - - 0.782 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
62. CTNNBL1 ENSGALG00000006817 6765 0.781 - - - - - - - 0.781 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
63. CDK5RAP2 ENSGALG00000041102 4042 0.779 - - - - - - - 0.779 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
64. OAZ2 ENSGALG00000036288 13213 0.779 - - - - - - - 0.779 - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
65. NDUFS5 ENSGALG00000003625 27698 0.778 - - - - - - - 0.778 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
66. PRKACB ENSGALG00000028530 12506 0.777 - - - - - - - 0.777 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
67. RSRC1 ENSGALG00000009669 5829 0.775 - - - - - - - 0.775 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
68. NIP7 ENSGALG00000000650 23932 0.775 - - - - - - - 0.775 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
69. C1H11ORF73 C1H11ORF73 10071 0.774 - - - - - - - 0.774 - -
70. SETD3 ENSGALG00000034802 4125 0.774 - - - - - - - 0.774 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
71. CDC42BPB ENSGALG00000011432 8220 0.773 - - - - - - - 0.773 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
72. SLC25A17 ENSGALG00000012013 13948 0.772 - - - - - - - 0.772 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
73. VEZT ENSGALG00000011357 2476 0.771 - - - - - - - 0.771 - - vezatin, adherens junctions transmembrane protein [Source:HGNC Symbol;Acc:HGNC:18258]
74. MRPL2 ENSGALG00000008597 16500 0.771 - - - - - - - 0.771 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
75. ASPG ENSGALG00000011572 4984 0.771 - - - - - - - 0.771 - - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
76. SRSF5 ENSGALG00000009421 8502 0.77 - - - - - - - 0.770 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
77. ANAPC16 ENSGALG00000004410 18001 0.77 - - - - - - - 0.770 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
78. OPA1 ENSGALG00000007150 5488 0.769 - - - - - - - 0.769 - - OPA1, mitochondrial dynamin like GTPase [Source:NCBI gene;Acc:424900]
79. UTP18 ENSGALG00000002985 7129 0.768 - - - - - - - 0.768 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
80. RPS13 ENSGALG00000006096 170517 0.766 - - - - - - 0.766 - - - ribosomal protein S13 [Source:NCBI gene;Acc:414782]
81. USP10 ENSGALG00000005674 7768 0.766 - - 0.766 - - - - - - - ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
82. MSH6 ENSGALG00000008957 6396 0.765 - - - - - - - 0.765 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
83. RIOK2 ENSGALG00000015288 6280 0.765 - - - - - - - 0.765 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
84. TXN2 ENSGALG00000012532 12518 0.765 - - - - - - - 0.765 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
85. PSMD7 ENSGALG00000000707 26350 0.764 - - - - - - - 0.764 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
86. NELL2 ENSGALG00000009601 4243 0.764 - - - - - - - 0.764 - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
87. MKRN1 ENSGALG00000012852 6907 0.764 - - - - - - - 0.764 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
88. PCF11 ENSGALG00000017249 4714 0.764 - - - - - - - 0.764 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
89. ADI1 ENSGALG00000025796 8636 0.763 - - - - - - - 0.763 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
90. STRN3 ENSGALG00000040464 9045 0.762 - - - - - - - 0.762 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
91. EXOC2 ENSGALG00000012837 4914 0.762 - - - - - - - 0.762 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
92. MRPL41 ENSGALG00000008746 3833 0.762 - - - - - - - 0.762 - - mitochondrial ribosomal protein L41 [Source:NCBI gene;Acc:417261]
93. CNI CNI 18453 0.762 - - - - - - - 0.762 - -
94. HCCS ENSGALG00000005571 4939 0.762 - - - - - - - 0.762 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
95. ZADH2 ENSGALG00000022882 11790 0.761 - - - - - - - 0.761 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
96. TAF13 ENSGALG00000015185 11410 0.76 - - - - - - - 0.760 - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
97. C11H16ORF80 C11H16ORF80 18673 0.76 - - - - - - - 0.760 - -
98. NUP85 ENSGALG00000007974 21249 0.759 - - - - - - - 0.759 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
99. RNF114 ENSGALG00000008021 6078 0.758 - - - - - - - 0.758 - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
100. ACTR8 ENSGALG00000005385 3647 0.758 - - - - - - - 0.758 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]

There are 254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA