Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SKA3

Gene Name Gene ID Reads Annotation
SKA3 ENSGALG00000017128 4176 spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]











Genes with expression patterns similar to SKA3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SKA3 ENSGALG00000017128 4176 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
2. PISD ENSGALG00000006872 3539 1.723 - - - - - - 0.972 0.751 - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
3. SFXN4 ENSGALG00000009350 3899 1.682 - - - - - - 0.976 0.706 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
4. NCBP2_1 ENSGALG00000006843 7170 1.602 - - - - - - 0.876 0.726 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
5. CHCHD4 ENSGALG00000006328 5860 1.585 - - - - - - 0.866 0.719 - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
6. IPO11 ENSGALG00000014740 4922 1.575 - - - - - - 0.862 0.713 - - importin 11 [Source:HGNC Symbol;Acc:HGNC:20628]
7. EMC3 ENSGALG00000003738 10363 1.525 - - - - - - 0.807 0.718 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
8. SLC29A1 ENSGALG00000010182 1522 0.984 - - - - - - 0.984 - - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
9. MORC2 2505 0.984 - - - - - - 0.984 - - - MORC family CW-type zinc finger 2, transcript variant X2
10. SETD7 ENSGALG00000009800 1230 0.984 - - - - - - 0.984 - - - SET domain containing lysine methyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:30412]
11. NDUFV1 ENSGALG00000042809 6222 0.983 - - - - - - 0.983 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
12. GKAP1 ENSGALG00000012586 2908 0.983 - - - - - - 0.983 - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
13. MTRF1L ENSGALG00000013609 1581 0.983 - - - - - - 0.983 - - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
14. GPATCH2 ENSGALG00000009627 4061 0.982 - - - - - - 0.982 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
15. FNTA ENSGALG00000015397 3741 0.982 - - - - - - 0.982 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
16. BECN1 ENSGALG00000002973 1569 0.982 - - - - - - 0.982 - - - beclin 1 [Source:NCBI gene;Acc:420018]
17. PTCHD1 ENSGALG00000016358 3882 0.982 - - - - - - 0.982 - - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
18. AASDHPPT ENSGALG00000027981 1017 0.982 - - - - - - 0.982 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
19. ZFX ENSGALG00000016327 5470 0.981 - - - - - - 0.981 - - - zinc finger protein, X-linked, transcript variant X4
20. C18H17ORF106 C18H17ORF106 2355 0.981 - - - - - - 0.981 - - -
21. SCYL3 ENSGALG00000036264 2935 0.981 - - - - - - 0.981 - - - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
22. NFYA ENSGALG00000003247 1894 0.981 - - - - - - 0.981 - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
23. GPATCH1 ENSGALG00000004839 6455 0.981 - - - - - - 0.981 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
24. UBE2K ENSGALG00000014290 2138 0.981 - - - - - - 0.981 - - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
25. TSTA3 ENSGALG00000031525 3391 0.98 - - - - - - 0.980 - - - tissue specific transplantation antigen P35B [Source:NCBI gene;Acc:420292]
26. FAIM ENSGALG00000012082 1209 0.98 - - - - - - 0.980 - - - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
27. ZCCHC10 ENSGALG00000036666 5148 0.98 - - - - - - 0.980 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
28. CCDC43 ENSGALG00000001022 5462 0.98 - - - - - - 0.980 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
29. ENSGALG00000001166 ENSGALG00000001166 2013 0.979 - - - - - - 0.979 - - -
30. ANXA6 ENSGALG00000004357 2891 0.979 - - - - - - 0.979 - - - annexin A6 [Source:NCBI gene;Acc:395481]
31. FBXO45 ENSGALG00000037281 3936 0.979 - - - - - - 0.979 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
32. ENSGALG00000026460 ENSGALG00000026460 607 0.979 - - - - - - 0.979 - - -
33. CWF19L2 ENSGALG00000017171 4590 0.978 - - - - - - 0.978 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
34. PXMP4 ENSGALG00000003042 1035 0.978 - - - - - - 0.978 - - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
35. BBX ENSGALG00000015353 1281 0.978 - - - - - - 0.978 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
36. F2RL1 ENSGALG00000014984 565 0.978 - - - - - - 0.978 - - - F2R like trypsin receptor 1 [Source:NCBI gene;Acc:427213]
37. TAOK3 ENSGALG00000007396 3094 0.978 - - - - - - 0.978 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
38. BTBD9 ENSGALG00000010131 1870 0.977 - - - - - - 0.977 - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
39. MLC1 ENSGALG00000040038 206 0.977 - - - - - - 0.977 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
40. KDELR3 ENSGALG00000032313 4376 0.977 - - - - - - 0.977 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
41. DDX54 ENSGALG00000007490 8729 0.977 - - - - - - 0.977 - - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
42. PEX3 ENSGALG00000013777 3158 0.977 - - - - - - 0.977 - - - peroxisomal biogenesis factor 3
43. INPP5E ENSGALG00000001964 3580 0.977 - - - - - - 0.977 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
44. ZNF335 ENSGALG00000041370 4740 0.977 - - - - - - 0.977 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
45. ENSGALG00000006671 ENSGALG00000006671 4194 0.977 - - - - - - 0.977 - - -
46. EFCAB10 ENSGALG00000045949 514 0.977 - - - - - - 0.977 - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
47. EPS8 295 0.977 - - - - - - 0.977 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X4
48. VTA1 ENSGALG00000013810 4998 0.976 - - - - - - 0.976 - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
49. STOML2 STOML2 15566 0.975 - - - - - - 0.975 - - -
50. MKI67 ENSGALG00000025996 28136 0.975 - - - - - - 0.975 - - - marker of proliferation Ki-67, transcript variant X3
51. TNFRSF21 ENSGALG00000016719 2762 0.975 - - - - - - 0.975 - - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
52. HDHD3 ENSGALG00000044101 6333 0.975 - - - - - - 0.975 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
53. ORC5 ENSGALG00000008175 3426 0.975 - - - - - - 0.975 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
54. PHKG1 ENSGALG00000002485 15214 0.974 - - - - - - 0.974 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
55. WDR77 ENSGALG00000040864 3766 0.974 - - - - - - 0.974 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
56. GINS1 ENSGALG00000008538 4786 0.973 - - - - - - 0.973 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
57. GEMIN5 ENSGALG00000003937 1685 0.973 - - - - - - 0.973 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
58. SPR ENSGALG00000000067 3456 0.973 - - - - - - 0.973 - - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
59. WBP4 ENSGALG00000016949 5858 0.973 - - - - - - 0.973 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
60. AKAP17A ENSGALG00000016686 2469 0.973 - - - - - - 0.973 - - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
61. RBFA ENSGALG00000036067 6542 0.973 - - - - - - 0.973 - - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
62. HS2ST1 ENSGALG00000028423 4153 0.972 - - - - - - 0.972 - - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
63. NDUFS3 ENSGALG00000008084 12471 0.972 - - - - - - 0.972 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
64. JUP ENSGALG00000017414 6920 0.972 - - - - - - 0.972 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
65. PEO1 PEO1 6747 0.972 - - - - - - 0.972 - - -
66. TBC1D19 ENSGALG00000029673 1868 0.971 - - - - - - 0.971 - - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
67. CMC1 ENSGALG00000025811 3939 0.971 - - - - - - 0.971 - - - C-X9-C motif containing 1
68. SLC35B1 ENSGALG00000035057 10683 0.97 - - - - - - 0.970 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
69. BOD1L1 ENSGALG00000026470 9250 0.969 - - - - - - 0.969 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
70. TMEM47 ENSGALG00000027198 3619 0.969 - - - - - - 0.969 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
71. XRCC2 ENSGALG00000026865 2214 0.969 - - - - - - 0.969 - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
72. UBE4A ENSGALG00000031134 5851 0.968 - - - - - - 0.968 - - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
73. NELL2 ENSGALG00000009601 4243 0.967 - - - - - - 0.967 - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
74. SON ENSGALG00000035096 8654 0.967 - - - - - - 0.967 - - - SON DNA binding protein, transcript variant X4
75. XPC ENSGALG00000006357 2484 0.967 - - - - - - 0.967 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
76. DNMT3A ENSGALG00000041454 9607 0.967 - - - - - - 0.967 - - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
77. EDEM2 ENSGALG00000003128 3338 0.966 - - - - - - 0.966 - - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
78. BYSL ENSGALG00000003467 7555 0.966 - - - - - - 0.966 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
79. MRPL18 ENSGALG00000011625 7855 0.964 - - - - - - 0.964 - - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
80. MNAT1 ENSGALG00000011910 6809 0.963 - - - - - - 0.963 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
81. CDK5RAP2 ENSGALG00000041102 4042 0.963 - - - - - - 0.963 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
82. DCAF4 ENSGALG00000009345 2604 0.963 - - - - - - 0.963 - - - DDB1 and CUL4 associated factor 4
83. LAMTOR3 ENSGALG00000000055 6311 0.963 - - - - - - 0.963 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:NCBI gene;Acc:425210]
84. FAM162A ENSGALG00000007378 8290 0.963 - - - - - - 0.963 - - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
85. METTL16 ENSGALG00000014901 3720 0.962 - - - - - - 0.962 - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
86. SUCO ENSGALG00000003081 4116 0.962 - - - - - - 0.962 - - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
87. INPP5A ENSGALG00000010493 6769 0.961 - - - - - - 0.961 - - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
88. CHCHD10 ENSGALG00000028810 10389 0.961 - - - - - - 0.961 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
89. CKLF ENSGALG00000005254 3365 0.96 - - - - - - 0.960 - - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
90. LRIG2 ENSGALG00000001733 2980 0.96 - - - - - - 0.960 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
91. NDP ENSGALG00000016222 1067 0.96 - - - - - - 0.960 - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
92. ACOT7 ENSGALG00000000652 7976 0.96 - - - - - - 0.960 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
93. TCF25 ENSGALG00000000129 7587 0.96 - - - - - - 0.960 - - - transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
94. FUBP3 ENSGALG00000003941 12667 0.958 - - - - - - 0.958 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
95. CWC22 ENSGALG00000009001 5984 0.958 - - - - - - 0.958 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
96. UTP18 ENSGALG00000002985 7129 0.957 - - - - - - 0.957 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
97. TANK ENSGALG00000011131 3382 0.951 - - - - - - 0.951 - - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
98. HDHD1 HDHD1 2928 0.951 - - - - - - 0.951 - - -
99. TMEM38A ENSGALG00000003778 3867 0.951 - - - - - - 0.951 - - - transmembrane protein 38A [Source:NCBI gene;Acc:771253]
100. RSPO2 ENSGALG00000030030 1271 0.95 - - - - - - 0.950 - - - R-spondin 2 [Source:NCBI gene;Acc:420271]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA