Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SKA2

Gene Name Gene ID Reads Annotation
SKA2 ENSGALG00000005090 24296 spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]











Genes with expression patterns similar to SKA2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SKA2 ENSGALG00000005090 24296 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
2. GEMIN5 ENSGALG00000003937 1685 1.549 - - - - - 0.811 0.738 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
3. XPC ENSGALG00000006357 2484 1.543 - - - - - 0.735 0.808 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
4. FNTA ENSGALG00000015397 3741 1.537 - - - - - - 0.776 0.761 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
5. BYSL ENSGALG00000003467 7555 1.492 - - - - - 0.727 0.765 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
6. EMC3 ENSGALG00000003738 10363 0.924 - - - - - - 0.924 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
7. NLK ENSGALG00000005699 9066 0.919 - - - - - - 0.919 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
8. ARL5B ENSGALG00000008557 12887 0.917 - - - - - - 0.917 - - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
9. COPB1 ENSGALG00000006015 16518 0.914 - - - - - - 0.914 - - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
10. MRPS33 ENSGALG00000028879 17966 0.91 - - - - - - 0.910 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
11. PAIP2 11856 0.91 - - - - - - 0.910 - - - poly(A) binding protein interacting protein 2, transcript variant X1
12. ACP1 ENSGALG00000016363 10636 0.909 - - - - - - 0.909 - - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
13. FNDC3AL ENSGALG00000004169 4980 0.907 - - - - - - 0.907 - - - fibronectin type III domain containing 3A-like, transcript variant X3
14. C1H21ORF91 ENSGALG00000028290 5550 0.904 - - - - - - 0.904 - - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
15. EPRS ENSGALG00000009598 26412 0.904 - - - - - - 0.904 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
16. NUDC ENSGALG00000000895 17844 0.896 - - - - - - 0.896 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
17. MRTO4 ENSGALG00000003991 13642 0.893 - - - - - - 0.893 - - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
18. MRPS6 ENSGALG00000027579 8225 0.893 - - - - - - 0.893 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
19. COX7A2 ENSGALG00000015906 62347 0.889 - - - - - - 0.889 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
20. CHDZ CHDZ 10381 0.888 - - - - - - 0.888 - - -
21. TBCA ENSGALG00000004353 18510 0.885 - - - - - - 0.885 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
22. ENSGALG00000028938 ENSGALG00000028938 18616 0.883 - - - - - - 0.883 - - -
23. PDCD5 ENSGALG00000004648 22576 0.882 - - - - - - 0.882 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
24. HAT1 ENSGALG00000009525 24864 0.881 - - - - - - 0.881 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
25. RBF RBF 49711 0.879 - - - - - - 0.879 - - -
26. TCF7L2 ENSGALG00000008883 13688 0.879 - - - - - - 0.879 - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
27. TRAF3IP1 ENSGALG00000004236 7094 0.878 - - - - - - 0.878 - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
28. ENSGALG00000004127 ENSGALG00000004127 566 0.878 - - - - - 0.878 - - - -
29. RSU1 ENSGALG00000040891 12561 0.877 - - - - - - 0.877 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
30. ENSGALG00000007096 ENSGALG00000007096 14595 0.875 - - - - - - 0.875 - - -
31. EXOC7 ENSGALG00000002050 9612 0.873 - - - - - - 0.873 - - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
32. HJURP ENSGALG00000015363 54 0.872 - - - - - 0.872 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
33. ENSGALG00000000508 ENSGALG00000000508 19203 0.872 - - - - - - 0.872 - - -
34. SMOC2 ENSGALG00000011205 340 0.871 - - - - - 0.871 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
35. ABCC3 ENSGALG00000007522 340 0.87 - - - - - 0.870 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
36. TBP ENSGALG00000011171 5759 0.869 - - - - - - 0.869 - - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
37. PPP4R2 ENSGALG00000007810 15127 0.869 - - - - - - 0.869 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
38. FUBP3 ENSGALG00000003941 12667 0.868 - - - - - - 0.868 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
39. ACTL6A ENSGALG00000009061 13013 0.868 - - - - - - 0.868 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
40. MCC ENSGALG00000000208 61 0.868 - - - - - 0.868 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
41. DESI2 ENSGALG00000010678 4590 0.868 - - - - - - 0.868 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
42. SERPINB1 ENSGALG00000019555 29 0.868 - - - - - 0.868 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
43. MRPS10 ENSGALG00000009890 9157 0.867 - - - - - - 0.867 - - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
44. PCBP4 ENSGALG00000027695 7937 0.867 - - - - - - 0.867 - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
45. BCAS2 ENSGALG00000002002 22536 0.867 - - - - - - 0.867 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
46. COX7C ENSGALG00000027963 84312 0.866 - - - - - 0.866 - - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
47. CRCP ENSGALG00000002587 8809 0.866 - - - - - 0.866 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
48. AQP1 ENSGALG00000005209 111 0.865 - - - - - 0.865 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
49. PAXBP1 ENSGALG00000036833 5573 0.865 - - - - - - 0.865 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
50. ETFDH ENSGALG00000009442 7671 0.865 - - - - - - 0.865 - - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
51. YAF2 ENSGALG00000009540 8452 0.865 - - - - - - 0.865 - - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
52. TERF1 ENSGALG00000037453 4497 0.865 - - - - - 0.865 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
53. ENSGALG00000026461 ENSGALG00000026461 61 0.864 - - - - - 0.864 - - - -
54. PNPLA4 ENSGALG00000016618 142 0.864 - - - - - 0.864 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
55. RPL22L1 ENSGALG00000009312 59030 0.864 - - - - - - 0.864 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
56. OLFML1 ENSGALG00000027184 19 0.864 - - - - - 0.864 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
57. KIF7 ENSGALG00000006611 33 0.863 - - - - - 0.863 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
58. DBT ENSGALG00000005280 2893 0.863 - - - - - 0.863 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
59. CHD4 ENSGALG00000013565 25695 0.862 - - - - - - 0.862 - - - chromodomain helicase DNA binding protein 4
60. PARP16 ENSGALG00000007365 9467 0.86 - - - - - - 0.860 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
61. SH2D1B ENSGALG00000028448 17 0.859 - - - - - 0.859 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
62. MLF1 ENSGALG00000009654 619 0.859 - - - - - 0.859 - - - - myeloid leukemia factor 1, transcript variant X3
63. FH ENSGALG00000013165 13669 0.859 - - - - - - 0.859 - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
64. XPO6 ENSGALG00000035360 7042 0.859 - - - - - - 0.859 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
65. GPD1L2 ENSGALG00000012061 31 0.859 - - - - - 0.859 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
66. TMED5 27507 0.858 - - - - - - 0.858 - - - transmembrane p24 trafficking protein 5
67. RAC3 ENSGALG00000040606 355 0.858 - - - - - 0.858 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
68. UTP18 ENSGALG00000002985 7129 0.857 - - - - - - 0.857 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
69. TOP1 ENSGALG00000003681 30214 0.857 - - - - - - 0.857 - - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
70. DRD4 ENSGALG00000040761 79 0.857 - - - - - 0.857 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
71. BDH1_1 ENSGALG00000023601 6109 0.856 - - - - - - 0.856 - - - 3-hydroxybutyrate dehydrogenase, type 1
72. MESDC2 MESDC2 11010 0.855 - - - - - - 0.855 - - -
73. ATP6V1D ENSGALG00000009570 9827 0.855 - - - - - - 0.855 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
74. ADD3 ENSGALG00000008542 13814 0.855 - - - - - - 0.855 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
75. DLC1 ENSGALG00000013715 5297 0.855 - - - - - - 0.855 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
76. DSEL ENSGALG00000042505 92 0.854 - - - - - 0.854 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
77. DPY30 ENSGALG00000010621 6818 0.853 - - - - - - 0.853 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
78. COMMD3 ENSGALG00000007900 8629 0.853 - - - - - - 0.853 - - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
79. ACOT7 ENSGALG00000000652 7976 0.853 - - - - - - 0.853 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
80. CHCHD10 ENSGALG00000028810 10389 0.853 - - - - - - 0.853 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
81. NOC3L ENSGALG00000035667 7441 0.853 - - - - - - 0.853 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
82. NIPAL4 ENSGALG00000039687 29 0.852 - - - - - 0.852 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
83. C1orf168 C1orf168 98 0.852 - - - - - 0.852 - - - -
84. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.852 - - - - - 0.852 - - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
85. POLB ENSGALG00000040828 7462 0.851 - - - - - 0.851 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
86. GTF3C4 ENSGALG00000031016 1221 0.851 - - - - - 0.851 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
87. CLASP1 ENSGALG00000011645 1378 0.85 - - - - - 0.850 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
88. CCDC104 CCDC104 6584 0.85 - - - - - - 0.850 - - -
89. ELMSAN1 ENSGALG00000009282 79 0.849 - - - - - 0.849 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
90. SEC31A ENSGALG00000040484 20190 0.849 - - - - - - 0.849 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
91. SMCHD1 ENSGALG00000014811 730 0.849 - - - - - 0.849 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]
92. BLVRA ENSGALG00000031786 23 0.848 - - - - - 0.848 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
93. LAMTOR2 ENSGALG00000029881 35356 0.848 - - - - - - 0.848 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
94. STOML2 STOML2 15566 0.848 - - - - - - 0.848 - - -
95. NDUFB6 ENSGALG00000002033 45494 0.847 - - - - - - 0.847 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
96. SCAF8 ENSGALG00000013635 421 0.846 - - - - - 0.846 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
97. SPTAN1 ENSGALG00000004719 20251 0.846 - - - - - - 0.846 - - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
98. THOC7 ENSGALG00000007299 38227 0.846 - - - - - - 0.846 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
99. C26H6ORF125 ENSGALG00000002881 15827 0.845 - - - - - - 0.845 - - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
100. HSPA12A ENSGALG00000009248 7783 0.845 - - - - - - 0.845 - - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]

There are 396 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA