Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SKA2

Gene Name Gene ID Reads Annotation
SKA2 ENSDARG00000114038 1448 spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]










Genes with expression patterns similar to SKA2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SKA2 ENSDARG00000114038 1448 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]
2. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 1.793 - 0.980 - - - - 0.813 - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
3. clcn5 clcn5 492 1.779 - 0.981 - - - - 0.798 - -
4. im:7136729 im:7136729 1625 1.759 - 0.988 - - - - - 0.771 -
5. vps4b ENSDARG00000069175 1922 1.752 - 0.975 - - - 0.777 - - - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
6. tango2 ENSDARG00000056550 1130 1.715 - 0.993 - - - 0.722 - - - transport and golgi organization 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040808-42]
7. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 1.701 - 0.991 - - - 0.710 - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
8. rnf128a ENSDARG00000016867 3146 1.687 - 0.972 0.715 - - - - - - ring finger protein 128a [Source:ZFIN;Acc:ZDB-GENE-030131-1044]
9. atf4b2 atf4b2 4734 1.653 - 0.942 - - - - 0.711 - -
10. urad ENSDARG00000071579, ENSDARG00000115541 46 1.53 - - - - - 0.766 0.764 - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
11. rbm41 ENSDARG00000054096 498 1.511 - - - - - - 0.776 0.735 - RNA binding motif protein 41 [Source:ZFIN;Acc:ZDB-GENE-041114-107]
12. tk2 ENSDARG00000046127, ENSDARG00000111531 204 1.503 - - - - - 0.768 0.735 - - thymidine kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-243]
13. CR735107.2 CR735107.2 476 1.443 - - - - - - 0.740 0.703 -
14. si:dkey-253d23.5 ENSDARG00000058566 237 1.441 - - - - 0.702 0.739 - - - si:dkey-253d23.5 [Source:ZFIN;Acc:ZDB-GENE-050208-729]
15. C17H2orf43 C17H2orf43 379 1.424 - - - - - 0.705 0.719 - -
16. BRCC3 ENSDARG00000098242 1123 0.995 - 0.995 - - - - - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
17. ube2e2 ENSDARG00000034670 5918 0.994 - 0.994 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
18. fosl2 ENSDARG00000040623 2041 0.994 - 0.994 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
19. eny2 ENSDARG00000070046 3741 0.994 - 0.994 - - - - - - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
20. ppp2r5cb ENSDARG00000031200 1832 0.994 - 0.994 - - - - - - - protein phosphatase 2, regulatory subunit B', gamma b [Source:ZFIN;Acc:ZDB-GENE-041014-4]
21. sp1 ENSDARG00000088347 1697 0.993 - 0.993 - - - - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
22. AL929204.1 AL929204.1 773 0.993 - 0.993 - - - - - - -
23. RCSD1 RCSD1 144 0.993 - 0.993 - - - - - - -
24. tnfrsf19 ENSDARG00000041869 796 0.993 - 0.993 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
25. csrnp2 ENSDARG00000075972 1650 0.993 - 0.993 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
26. ubn2 ubn2 534 0.993 - 0.993 - - - - - - -
27. tsc22d1 ENSDARG00000038306 2413 0.993 - 0.993 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
28. prr12a ENSDARG00000074229 1668 0.993 - 0.993 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
29. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 0.993 - 0.993 - - - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
30. ptpn9a ENSDARG00000077495 2295 0.993 - 0.993 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
31. igsf9a ENSDARG00000075864 1870 0.993 - 0.993 - - - - - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
32. rerea ENSDARG00000077353 4162 0.993 - 0.993 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
33. tox4 tox4 1671 0.992 - 0.992 - - - - - - -
34. pfkfb3 ENSDARG00000001953 656 0.992 - 0.992 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
35. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 0.992 - 0.992 - - - - - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
36. pip4k2aa ENSDARG00000003776 865 0.992 - 0.992 - - - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
37. wipf1 wipf1 760 0.992 - 0.992 - - - - - - -
38. si:dkey-9i23.11 si:dkey-9i23.11 3818 0.992 - 0.992 - - - - - - -
39. si:ch211-218c6.8 ENSDARG00000092364 1270 0.992 - 0.992 - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
40. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.992 - 0.992 - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
41. zgc:123295 ENSDARG00000056324 361 0.992 - 0.992 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
42. ptk6a ENSDARG00000017947 682 0.992 - 0.992 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
43. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.992 - 0.992 - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
44. polr1e ENSDARG00000006434, ENSDARG00000113920 770 0.992 - 0.992 - - - - - - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
45. CHD1 ENSDARG00000103787 1645 0.992 - 0.992 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
46. DUSP28 ENSDARG00000059695 1135 0.992 - 0.992 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
47. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.992 - 0.992 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
48. psma6a ENSDARG00000019398 2702 0.992 - 0.992 - - - - - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
49. slc31a2 ENSDARG00000076092 251 0.992 - 0.992 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
50. chpfa ENSDARG00000078392 1427 0.991 - 0.991 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
51. zfyve28 ENSDARG00000060430 797 0.991 - 0.991 - - - - - - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
52. setd7 ENSDARG00000038858 1072 0.991 - 0.991 - - - - - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
53. tpi1a ENSDARG00000025012 562 0.991 - 0.991 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
54. appl1 1019 0.991 - 0.991 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
55. arid1ab ENSDARG00000101891 1722 0.991 - 0.991 - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
56. kif13ba ENSDARG00000079731 1726 0.991 - 0.991 - - - - - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
57. si:dkey-11e23.9 ENSDARG00000095586 114 0.991 - 0.991 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
58. sept8b ENSDARG00000014233 223 0.991 - 0.991 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
59. ppp1r14ba ENSDARG00000044541 792 0.991 - 0.991 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
60. ptpn4b ENSDARG00000000183 425 0.991 - 0.991 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
61. scn3b ENSDARG00000062359 242 0.991 - 0.991 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
62. cnot3b ENSDARG00000019842 838 0.991 - 0.991 - - - - - - - CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
63. pik3r1 ENSDARG00000038524 3615 0.991 - 0.991 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-1280]
64. cdk11b ENSDARG00000102546 1579 0.991 - 0.991 - - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
65. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.991 - 0.991 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
66. meis4.1a meis4.1a 1165 0.991 - 0.991 - - - - - - -
67. C25H1orf51 C25H1orf51 2460 0.991 - 0.991 - - - - - - -
68. SETDB2 ENSDARG00000101462 249 0.991 - 0.991 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
69. pax9 ENSDARG00000053829 1193 0.991 - 0.991 - - - - - - - paired box 9 [Source:ZFIN;Acc:ZDB-GENE-980526-399]
70. acadsb ENSDARG00000076780 2382 0.991 - 0.991 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
71. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 0.991 - 0.991 - - - - - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
72. nol11 ENSDARG00000026767 2528 0.99 - 0.990 - - - - - - - nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
73. KLF8 ENSDARG00000060661 219 0.99 - 0.990 - - - - - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
74. sirt1 ENSDARG00000068064 1393 0.99 - 0.990 - - - - - - - sirtuin 1 [Source:ZFIN;Acc:ZDB-GENE-070801-2]
75. tnfaip2a ENSDARG00000043416 688 0.99 - 0.990 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
76. dhrs9 ENSDARG00000019260 250 0.99 - 0.990 - - - - - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
77. mis18a ENSDARG00000035333 555 0.99 - 0.990 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
78. mxra7 ENSDARG00000095300 332 0.99 - 0.990 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
79. stxbp5b ENSDARG00000029234 760 0.99 - 0.990 - - - - - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
80. jhdm1da jhdm1da 512 0.99 - 0.990 - - - - - - -
81. cttnbp2 ENSDARG00000040991 1697 0.989 - 0.989 - - - - - - - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
82. cenpl ENSDARG00000038802 696 0.989 - 0.989 - - - - - - - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
83. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.989 - 0.989 - - - - - - - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
84. rnf2 ENSDARG00000010381 3427 0.989 - 0.989 - - - - - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
85. fam20a ENSDARG00000079486 1199 0.989 - 0.989 - - - - - - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
86. aqr ENSDARG00000016775 1581 0.989 - 0.989 - - - - - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
87. larp1 ENSDARG00000101722 976 0.989 - 0.989 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
88. cse1l ENSDARG00000006963 3261 0.989 - 0.989 - - - - - - - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
89. prrx1b ENSDARG00000042027 1128 0.989 - 0.989 - - - - - - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
90. MDP1 MDP1 687 0.989 - 0.989 - - - - - - -
91. mtpn ENSDARG00000104018 4264 0.988 - 0.988 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
92. SH3D21 ENSDARG00000099448 1726 0.988 - 0.988 - - - - - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
93. lrrc23 ENSDARG00000006174 234 0.988 - 0.988 - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
94. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 0.988 - 0.988 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
95. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 0.988 - 0.988 - - - - - - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
96. eya3 ENSDARG00000036100 1965 0.988 - 0.988 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
97. pkd2 ENSDARG00000014098 2384 0.987 - 0.987 - - - - - - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
98. ncapd2 ENSDARG00000005058 2819 0.987 - 0.987 - - - - - - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
99. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 0.987 - 0.987 - - - - - - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
100. tpst1 ENSDARG00000073872 2490 0.987 - 0.987 - - - - - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]

There are 723 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA