Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX4

Gene Name Gene ID Reads Annotation
SIX4 ENSGALG00000017389 10 SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]











Genes with expression patterns similar to SIX4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX4 ENSGALG00000017389 10 6 - - 1.000 - 1.000 1.000 1.000 1.000 - 1.000 SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
2. VENTX VENTX 50 2 - - - - - 1.000 1.000 - - -
3. AOX1 ENSGALG00000008185 14 1.993 - - - - - 1.000 - 0.993 - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
4. MAST3 ENSGALG00000003499 21 1.827 - - - - - 0.827 - 1.000 - - microtubule associated serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:19036]
5. C9orf3 C9orf3 47 1.744 - - - - 0.744 - 1.000 - - -
6. PLAGL1 ENSGALG00000013754 45 1.72 - - - - - 0.945 0.775 - - - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
7. SRPX2 ENSGALG00000006796 32 1.537 - - - - 0.732 - - - - 0.805 sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
8. BHLHE23 ENSGALG00000005718 0 1 - - - - - 1.000 - - - - basic helix-loop-helix family member e23 [Source:NCBI gene;Acc:395165]
9. ADAM20 ENSGALG00000013838, ENSGALG00000021341 5 1 - - - - - 1.000 - - - - ADAM metallopeptidase domain 20 [Source:HGNC Symbol;Acc:HGNC:199]
10. CARF ENSGALG00000008474 6 1 - - - - - - 1.000 - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
11. MYLK3 ENSGALG00000004334 13 1 - - - - 1.000 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
12. ENSGALG00000024063 ENSGALG00000024063 0 1 - - - - - 1.000 - - - -
13. UBAP1 ENSGALG00000021378 11 1 - - - - - 1.000 - - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
14. SLC26A4 ENSGALG00000007998 2 1 - - - - - - 1.000 - - - solute carrier family 26 member 4 [Source:HGNC Symbol;Acc:HGNC:8818]
15. DSG1 ENSGALG00000017398 1 1 - - - - - 1.000 - - - - desmoglein 1 [Source:HGNC Symbol;Acc:HGNC:3048]
16. SLC5A7 ENSGALG00000016804 93 1 - - - - - - 1.000 - - - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
17. MEGF9 3 1 - - - - - 1.000 - - - - multiple EGF-like-domains 9
18. GRAP ENSGALG00000005094 0 1 - - - - - 1.000 - - - - GRB2 related adaptor protein [Source:NCBI gene;Acc:416523]
19. PAX5 ENSGALG00000016431 1 1 - - - - - - 1.000 - - - paired box 5 [Source:NCBI gene;Acc:387330]
20. WNK1 ENSGALG00000012992 67 1 - - - - - - 1.000 - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
21. RC3H2 ENSGALG00000001253 18 1 - - - - 1.000 - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
22. C7orf57 C7orf57 1 1 - - - - - 1.000 - - - -
23. THRSP ENSGALG00000035803 2 1 - - - - - 1.000 - - - - thyroid hormone responsive [Source:NCBI gene;Acc:404755]
24. SCN3B ENSGALG00000006490 48 1 - - - - - - 1.000 - - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
25. TMEM132D ENSGALG00000002671 12 1 - - - - 1.000 - - - - - transmembrane protein 132D, transcript variant X6
26. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - 1.000 - - - -
27. SHROOM3 35 1 - - - - - - 1.000 - - - shroom family member 3, transcript variant X1
28. ZC3H7B ENSGALG00000011965 6 1 - - - - - 1.000 - - - - zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
29. C22orf23 ENSGALG00000012293 21 1 - - - - - 1.000 - - - - chromosome 22 open reading frame 23 [Source:HGNC Symbol;Acc:HGNC:18589]
30. SCN1A ENSGALG00000010943 6 1 - - - - - - 1.000 - - - sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
31. ADAMTS18 ENSGALG00000005347 17 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 18 [Source:HGNC Symbol;Acc:HGNC:17110]
32. SLC22A7 ENSGALG00000001661 9 1 - - - - 1.000 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
33. C2orf50 ENSGALG00000046449 17 1 - - - - 1.000 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
34. EPB42 ENSGALG00000021230 20 1 - - - - - - 1.000 - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
35. RIPPLY1 RIPPLY1 34 1 - - - - - 1.000 - - - -
36. NKAIN4 ENSGALG00000005774 10 1 - - - - - 1.000 - - - - sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
37. FCHSD1 ENSGALG00000002622 6 1 - - - - - 1.000 - - - - FCH and double SH3 domains 1 [Source:HGNC Symbol;Acc:HGNC:25463]
38. TAB3 ENSGALG00000016284 40 1 - - - - 1.000 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
39. WNT11B ENSGALG00000004401 0 1 - - - - - 1.000 - - - - wingless-type MMTV integration site family, member 11b [Source:NCBI gene;Acc:100170842]
40. CFAP99 ENSGALG00000015685 32 1 - - - - - - 1.000 - - - cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
41. TECPR1 ENSGALG00000003507 20 1 - - - - 1.000 - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
42. LMLN ENSGALG00000012067 15 1 - - - - - - 1.000 - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
43. CRHBP ENSGALG00000014994 8 1 - - - - - 1.000 - - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
44. ABCG4 ENSGALG00000006795 1 1 - - - - - 1.000 - - - - ATP binding cassette subfamily G member 4 [Source:HGNC Symbol;Acc:HGNC:13884]
45. FMO3 ENSGALG00000040573 26 1 - - - - - 1.000 - - - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
46. ACKR4 ENSGALG00000041491 7 1 - - - - - 1.000 - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
47. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - 1.000 - - - - translin associated factor X interacting protein 1, transcript variant X2
48. ENSGALG00000028222 ENSGALG00000028222 44 1 - - - - - - 1.000 - - -
49. gga-mir-92 gga-mir-92 0 1 - - - - - 1.000 - - - -
50. F7 ENSGALG00000016833 4 1 - - - - - 1.000 - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
51. SNX21 ENSGALG00000006836 5 1 - - - - 1.000 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
52. CCDC69 2 1 - - - - - 1.000 - - - - coiled-coil domain containing 69
53. WWTR1 ENSGALG00000010412 5 1 - - - - - - 1.000 - - - WW domain containing transcription regulator 1 [Source:HGNC Symbol;Acc:HGNC:24042]
54. TYRP1 ENSGALG00000015205 4 1 - - - - - - 1.000 - - - tyrosinase related protein 1 [Source:NCBI gene;Acc:395913]
55. PRSS56 ENSGALG00000045413 17 1 - - - - - 1.000 - - - - serine protease 56 [Source:HGNC Symbol;Acc:HGNC:39433]
56. LOC100859020 ENSGALG00000027645 1 1 - - - - - 1.000 - - - - rab9 effector protein with kelch motifs-like, transcript variant X3
57. ADAMTSL2 ENSGALG00000002955 5 1 - - - - - 1.000 - - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
58. OLAH ENSGALG00000043833 3 1 - - - - - - 1.000 - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
59. TLR21 ENSGALG00000033068 0 1 - - - - - 1.000 - - - - Toll-like receptor 21 [Source:NCBI gene;Acc:415623]
60. UBXN6 ENSGALG00000001146 122 1 - - - - - - 1.000 - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
61. HOXA9 ENSGALG00000028983 9298 1 - - - - 1.000 - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
62. CNP1 ENSGALG00000028638 56 1 - - - - - - 1.000 - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
63. MILR1 ENSGALG00000046212 7 1 - - - - 1.000 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
64. SEMA4G ENSGALG00000026957 11 1 - - - - - - 1.000 - - - semaphorin 4G [Source:HGNC Symbol;Acc:HGNC:10735]
65. GHSR ENSGALG00000027947 24 1 - - - - - - 1.000 - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
66. ARSA ENSGALG00000035824 299 1 - - - - - - 1.000 - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
67. SLC36A4 ENSGALG00000017227 3 1 - - - - - 1.000 - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
68. GTF3C6 ENSGALG00000015044 112 1 - - - - - - 1.000 - - - general transcription factor IIIC subunit 6 [Source:NCBI gene;Acc:421754]
69. DSE ENSGALG00000014963 70 1 - - - - - - - 1.000 - - dermatan sulfate epimerase, transcript variant X1
70. NTRK3 ENSGALG00000040241 3 1 - - - - - 1.000 - - - - neurotrophic receptor tyrosine kinase 3 [Source:NCBI gene;Acc:396081]
71. HECA ENSGALG00000013824 14 1 - - - - - - 1.000 - - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
72. RASA4 ENSGALG00000001876 178 1 - - - - - - 1.000 - - - RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
73. SYT10 ENSGALG00000012911 17 1 - - - - - 1.000 - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
74. DNAJC28 ENSGALG00000037414 6 1 - - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
75. VLDL VLDL 13 1 - - - - 1.000 - - - - -
76. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - - - - 1.000 - - -
77. GRIN2A ENSGALG00000007278 17 1 - - - - - 1.000 - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
78. RASAL2 ENSGALG00000004323 55 1 - - - - - - 1.000 - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
79. ASL1 ENSGALG00000002558 78 1 - - - - - 1.000 - - - - argininosuccinate lyase 1 [Source:NCBI gene;Acc:396498]
80. KCNAB1 5 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily A member regulatory beta subunit 1, transcript variant X1
81. SEPT12 ENSGALG00000029027 611 1 - - - - - - 1.000 - - - septin 12 [Source:HGNC Symbol;Acc:HGNC:26348]
82. MOG ENSGALG00000022875 9 1 - - - - - 1.000 - - - - myelin oligodendrocyte glycoprotein, transcript variant X50
83. ENSGALG00000027018 ENSGALG00000027018 12 1 - - - - - 1.000 - - - -
84. SEC14L3 ENSGALG00000007840 2 1 - - - - - 1.000 - - - - SEC14 like lipid binding 3, transcript variant X2
85. ENSGALG00000014107 ENSGALG00000014107 6 1 - - - - - 1.000 - - - -
86. ZNF143 ENSGALG00000005787 345 1 - - - - - - 1.000 - - - zinc finger protein 143 [Source:HGNC Symbol;Acc:HGNC:12928]
87. ASMT ENSGALG00000016685 3 1 - - - - - - 1.000 - - - acetylserotonin O-methyltransferase [Source:NCBI gene;Acc:396286]
88. SPAG17 55 0.993 - - - - - - - 0.993 - - sperm associated antigen 17
89. GABRP ENSGALG00000002152 17 0.993 - - - - - - - 0.993 - - gamma-aminobutyric acid type A receptor pi subunit [Source:HGNC Symbol;Acc:HGNC:4089]
90. CRYBA4 ENSGALG00000005634 56 0.993 - - - - - - - 0.993 - - crystallin beta A4 [Source:NCBI gene;Acc:373998]
91. ENSGALG00000022155 ENSGALG00000022155 80 0.991 - - - - 0.991 - - - - -
92. POLR3K ENSGALG00000017681 298 0.989 - - - - - 0.989 - - - - RNA polymerase III subunit K [Source:HGNC Symbol;Acc:HGNC:14121]
93. ENSGALG00000013318 ENSGALG00000013318 8 0.986 - - - - 0.986 - - - - -
94. TAPBPL ENSGALG00000014428 39 0.985 - - - - 0.985 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
95. K123 ENSGALG00000041978 16 0.977 - - - - 0.977 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
96. ST3GAL5 ENSGALG00000033260 19 0.961 - - - - 0.961 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
97. TMEM156 ENSGALG00000024490 9 0.956 - - - - 0.956 - - - - - transmembrane protein 156, transcript variant X5
98. ENSGALG00000028328 ENSGALG00000028328 23 0.953 - - - - 0.953 - - - - -
99. ENSGALG00000003444 ENSGALG00000003444 1 0.95 - - 0.950 - - - - - - -
100. FBXL20 ENSGALG00000001682 2 0.95 - - 0.950 - - - - - - - F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]

There are 190 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA