Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
4. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
5. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
6. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
7. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
12. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
13. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
14. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
15. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
16. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
17. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
18. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
19. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
20. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
21. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
22. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. ENSGALG00000028737 ENSGALG00000028737 24 0.768 - - - - - - - 0.768 - -
27. UPK3B 4 0.768 - - - - - - - 0.768 - - uroplakin 3B
28. KIAA1199 KIAA1199 6 0.768 - - - - - - - 0.768 - -
29. MICALL2 ENSGALG00000004070 23 0.768 - - - - - - - 0.768 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
30. DOK6 ENSGALG00000013753 2 0.768 - - - - - - - 0.768 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
31. GTF2A1L ENSGALG00000026747 13 0.768 - - - - - - - 0.768 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
32. PPP1R1B ENSGALG00000044406 6 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
33. SLC15A1 ENSGALG00000016884 10 0.768 - - - - - - - 0.768 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
34. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
35. ENSGALG00000018621 ENSGALG00000018621 8 0.768 - - - - - - - 0.768 - -
36. B3GALT6 ENSGALG00000001859 5 0.768 - - - - - - - 0.768 - - beta-1,3-galactosyltransferase 6
37. RMST RMST 2 0.768 - - - - - - - 0.768 - -
38. WDR78 ENSGALG00000045792 6 0.768 - - - - - - - 0.768 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
39. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
40. E2F3 ENSGALG00000012680 21 0.768 - - - - - - - 0.768 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
41. STMN2 ENSGALG00000039690 989 0.768 - - - - - - - 0.768 - - stathmin 2 [Source:NCBI gene;Acc:396095]
42. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
43. COL4A3 ENSGALG00000038612 41 0.768 - - - - - - - 0.768 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
44. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
45. SH3GL3 ENSGALG00000006045 12 0.768 - - - - - - - 0.768 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
46. SOX8 ENSGALG00000005263 218 0.768 - - - - - - - 0.768 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
47. DMGDH ENSGALG00000004491 15 0.768 - - - - - - - 0.768 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
48. SLC6A20 ENSGALG00000039333 1 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
49. GDPD4 ENSGALG00000000690 824 0.768 - - - - - - - 0.768 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
50. ENSGALG00000025781 ENSGALG00000025781 1 0.768 - - - - - - - 0.768 - -
51. TRIM3 ENSGALG00000034004 110 0.768 - - - - - - - 0.768 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
52. VIT ENSGALG00000010583 16 0.768 - - - - - - - 0.768 - - vitrin [Source:NCBI gene;Acc:421471]
53. SCG5 ENSGALG00000009725 10 0.768 - - - - - - - 0.768 - - secretogranin V [Source:NCBI gene;Acc:769742]
54. ENSGALG00000028340 ENSGALG00000028340 31 0.768 - - - - - - - 0.768 - -
55. ENSGALG00000017391 ENSGALG00000017391 12 0.768 - - - - - - - 0.768 - -
56. DENND5A ENSGALG00000005840 54 0.768 - - - - - - - 0.768 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
57. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
58. HK3 ENSGALG00000027287 20 0.768 - - - - - - - 0.768 - - hexokinase 3, transcript variant X3
59. HSPB7L ENSGALG00000028183 795 0.768 - - - - - - - 0.768 - - heat shock protein beta-7-like
60. LOC421081 ENSGALG00000015106 0 0.768 - - - - - - - 0.768 - - uncharacterized LOC421081, transcript variant X1
61. CLVS1 ENSGALG00000043172 56 0.768 - - - - - - - 0.768 - - clavesin 1
62. NMNAT3 ENSGALG00000026187 11 0.768 - - - - - - - 0.768 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
63. PBEF1 PBEF1 25 0.768 - - - - - - - 0.768 - -
64. IL18R1 ENSGALG00000040621 12 0.768 - - - - - - - 0.768 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
65. ATXN10 ENSGALG00000014234 16 0.768 - - - - - - - 0.768 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
66. ENSGALG00000014605 ENSGALG00000014605 1 0.768 - - - - - - - 0.768 - -
67. CYR61 ENSGALG00000008661 43 0.768 - - - - - - - 0.768 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
68. ADAMTS8 ENSGALG00000001370 0 0.768 - - - - - - - 0.768 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
69. LRCH1 ENSGALG00000016990 17 0.768 - - - - - - - 0.768 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
70. FADS6 ENSGALG00000029445 12 0.768 - - - - - - - 0.768 - - fatty acid desaturase 6 [Source:HGNC Symbol;Acc:HGNC:30459]
71. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
72. PHACTR3 250 0.768 - - - - - - - 0.768 - - phosphatase and actin regulator 3, transcript variant X4
73. COL15A1 ENSGALG00000034119 9 0.768 - - - - - - - 0.768 - - collagen type XV alpha 1 chain, transcript variant X6
74. CBR4 ENSGALG00000009714 7 0.768 - - - - - - - 0.768 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
75. WDR52 WDR52 37 0.768 - - - - - - - 0.768 - -
76. TGFBR2 ENSGALG00000011442 3 0.768 - - - - - - - 0.768 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
77. ENSGALG00000004157 ENSGALG00000004157 1 0.768 - - - - - - - 0.768 - -
78. SEC16B ENSGALG00000004424 4 0.768 - - - - - - - 0.768 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
79. SLC25A42 ENSGALG00000002621 6 0.768 - - - - - - - 0.768 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
80. RBL2 ENSGALG00000003663 10 0.768 - - - - - - - 0.768 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
81. GRM3 ENSGALG00000006576 474 0.768 - - - - - - - 0.768 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
82. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
83. gga-mir-218-1 ENSGALG00000018327 3 0.768 - - - - - - - 0.768 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
84. COG3 ENSGALG00000016980 15 0.768 - - - - - - - 0.768 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
85. SKI ENSGALG00000001229 50 0.768 - - - - - - - 0.768 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
86. MOCS1 ENSGALG00000010051 70 0.768 - - - - - - - 0.768 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
87. SPINK6 ENSGALG00000032567 3 0.768 - - - - - - - 0.768 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
88. TOX3 ENSGALG00000034649 54 0.768 - - - - - - - 0.768 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
89. CBX2 ENSGALG00000023338 10 0.768 - - - - - - - 0.768 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
90. TRAF1 ENSGALG00000001583 3 0.768 - - - - - - - 0.768 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
91. LOC395381 ENSGALG00000006717 10 0.768 - - - - - - - 0.768 - - ovomucin, alpha subunit, transcript variant X4
92. SPIDR SPIDR 19 0.768 - - - - - - - 0.768 - -
93. ENSGALG00000005482 ENSGALG00000005482 1 0.768 - - - - - - - 0.768 - -
94. LRP3 ENSGALG00000004853 13 0.768 - - - - - - - 0.768 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
95. CD99L2 ENSGALG00000009075 5 0.768 - - - - - - - 0.768 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
96. PDCD4 ENSGALG00000008700 574 0.768 - - - - - - - 0.768 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
97. ENSGALG00000026925 ENSGALG00000026925 119 0.768 - - - - - - - 0.768 - -
98. MGAT3 ENSGALG00000036743 5 0.768 - - - - - - - 0.768 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
99. TCF20 ENSGALG00000011878 69 0.768 - - - - - - - 0.768 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
100. RAD54L ENSGALG00000010356 7 0.768 - - - - - - - 0.768 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA